RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 MADDQ8WXG6 1647 aa23.46■■□□□ 1.35
IFT20-206ENST00000578122 RRP7BPQ9NSQ0 103 aa23.46■■□□□ 1.35
IFT20-206ENST00000578122 PTPRKQ15262 1439 aa23.45■■□□□ 1.34
IFT20-206ENST00000578122 KIF15Q9NS87 1388 aa23.45■■□□□ 1.34
IFT20-206ENST00000578122 FER1L4A9Z1Z3 1794 aa23.45■■□□□ 1.34
IFT20-206ENST00000578122 DUOX2Q9NRD8 1548 aa23.44■■□□□ 1.34
IFT20-206ENST00000578122 ADGRL2O95490 1459 aa23.44■■□□□ 1.34
IFT20-206ENST00000578122 NCOA1Q15788 1441 aa23.43■■□□□ 1.34
IFT20-206ENST00000578122 RIMS1Q86UR5 1692 aaKnown RBP23.43■■□□□ 1.34
IFT20-206ENST00000578122 RNF216Q9NWF9 866 aaPredicted RBP23.42■■□□□ 1.34
IFT20-206ENST00000578122 KIF3BO15066 747 aa23.41■■□□□ 1.34
IFT20-206ENST00000578122 GGT6Q6P531 493 aa23.39■■□□□ 1.33
IFT20-206ENST00000578122 EIF2AK4Q9P2K8 1649 aaKnown RBP23.39■■□□□ 1.33
IFT20-206ENST00000578122 ROCK1Q13464 1354 aa23.38■■□□□ 1.33
IFT20-206ENST00000578122 PTPRMP28827 1452 aa23.36■■□□□ 1.33
IFT20-206ENST00000578122 ERBINQ96RT1 1412 aa23.36■■□□□ 1.33
IFT20-206ENST00000578122 ESF1Q9H501 851 aaKnown RBP23.36■■□□□ 1.33
IFT20-206ENST00000578122 RNF17Q9BXT8 1623 aaKnown RBP23.33■■□□□ 1.33
IFT20-206ENST00000578122 CNTLNQ9NXG0 1405 aa23.32■■□□□ 1.32
IFT20-206ENST00000578122 CLTCQ00610 1675 aaKnown RBP23.31■■□□□ 1.32
IFT20-206ENST00000578122 NCBP3Q53F19 620 aaKnown RBP23.3■■□□□ 1.32
IFT20-206ENST00000578122 ANKRD50Q9ULJ7 1429 aa23.3■■□□□ 1.32
IFT20-206ENST00000578122 MROH2AA6NES4 1674 aa23.28■■□□□ 1.32
IFT20-206ENST00000578122 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
IFT20-206ENST00000578122 FAM135AQ9P2D6 1515 aa23.26■■□□□ 1.31
IFT20-206ENST00000578122 C3P01024 1663 aa23.25■■□□□ 1.31
IFT20-206ENST00000578122 KDM5DQ9BY66 1539 aa23.25■■□□□ 1.31
IFT20-206ENST00000578122 CEBPAP49715 358 aaPredicted RBP23.25■■□□□ 1.31
IFT20-206ENST00000578122 WASHC2CQ9Y4E1 1318 aa23.25■■□□□ 1.31
IFT20-206ENST00000578122 DEPDC5O75140 1603 aa23.25■■□□□ 1.31
IFT20-206ENST00000578122 ZMYM3Q14202 1370 aa23.24■■□□□ 1.31
IFT20-206ENST00000578122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.23■■□□□ 1.313e-6■■□□□ 11.7
IFT20-206ENST00000578122 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
IFT20-206ENST00000578122 ABCC3O15438 1527 aa23.21■■□□□ 1.31
IFT20-206ENST00000578122 ZC3H13Q5T200 1668 aaKnown RBP23.21■■□□□ 1.31
IFT20-206ENST00000578122 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
IFT20-206ENST00000578122 CEP152O94986 1710 aa23.21■■□□□ 1.31
IFT20-206ENST00000578122 NAIPQ13075 1403 aa23.19■■□□□ 1.3
IFT20-206ENST00000578122 KANK1Q14678 1352 aa23.19■■□□□ 1.3
IFT20-206ENST00000578122 SETD1BQ9UPS6 1966 aaKnown RBP23.18■■□□□ 1.3
IFT20-206ENST00000578122 HFM1A2PYH4 1435 aa23.17■■□□□ 1.3
IFT20-206ENST00000578122 UNC13BO14795 1591 aa23.16■■□□□ 1.3
IFT20-206ENST00000578122 VWDEQ8N2E2 1590 aa23.15■■□□□ 1.3
IFT20-206ENST00000578122 CAMSAP1Q5T5Y3 1602 aa23.15■■□□□ 1.3
IFT20-206ENST00000578122 NPATQ14207 1427 aa23.12■■□□□ 1.29
IFT20-206ENST00000578122 CFAP65Q6ZU64 1925 aaKnown RBP23.12■■□□□ 1.29
IFT20-206ENST00000578122 PZPP20742 1482 aa23.11■■□□□ 1.29
IFT20-206ENST00000578122 LMTK2Q8IWU2 1503 aa23.1■■□□□ 1.29
IFT20-206ENST00000578122 PREX1Q8TCU6 1659 aa23.09■■□□□ 1.29
IFT20-206ENST00000578122 FBXO31Q5XUX0 539 aaPredicted RBP23.08■■□□□ 1.29
IFT20-206ENST00000578122 NUP155O75694 1391 aa23.08■■□□□ 1.29
IFT20-206ENST00000578122 IQGAP3Q86VI3 1631 aa23.07■■□□□ 1.28
IFT20-206ENST00000578122 ARHGAP31Q2M1Z3 1444 aa23.06■■□□□ 1.28
IFT20-206ENST00000578122 TET3O43151 1660 aa23.06■■□□□ 1.28
IFT20-206ENST00000578122 EFCAB6Q5THR3 1501 aa23.04■■□□□ 1.28
IFT20-206ENST00000578122 UHRF1BP1Q6BDS2 1440 aa23.03■■□□□ 1.28
IFT20-206ENST00000578122 SETD5Q9C0A6 1442 aa23.03■■□□□ 1.28
IFT20-206ENST00000578122 LMTK3Q96Q04 1460 aa23.03■■□□□ 1.28
IFT20-206ENST00000578122 TNRQ92752 1358 aa23.02■■□□□ 1.28
IFT20-206ENST00000578122 ERVK-7P63135 1459 aa23.02■■□□□ 1.28
IFT20-206ENST00000578122 TRIM52Q96A61 297 aa23.01■■□□□ 1.27
IFT20-206ENST00000578122 SPATA31D1Q6ZQQ2 1576 aa23.01■■□□□ 1.27
IFT20-206ENST00000578122 MYO3AQ8NEV4 1616 aa23■■□□□ 1.27
IFT20-206ENST00000578122 E9PCH4 1651 aa22.97■■□□□ 1.27
IFT20-206ENST00000578122 RPRD2Q5VT52 1461 aaKnown RBP22.97■■□□□ 1.27
IFT20-206ENST00000578122 ZNF142P52746 1687 aaPredicted RBP22.95■■□□□ 1.26
IFT20-206ENST00000578122 RAB3GAP2Q9H2M9 1393 aa22.94■■□□□ 1.26
IFT20-206ENST00000578122 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
IFT20-206ENST00000578122 HSPA2P54652 639 aa22.94■■□□□ 1.26
IFT20-206ENST00000578122 CACNB1Q02641 598 aaPredicted RBP22.94■■□□□ 1.26
IFT20-206ENST00000578122 CEP170BQ9Y4F5 1589 aaPredicted RBP22.93■■□□□ 1.26
IFT20-206ENST00000578122 NLRP1Q9C000 1473 aa22.93■■□□□ 1.26
IFT20-206ENST00000578122 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
IFT20-206ENST00000578122 NPM3O75607 178 aaKnown RBP22.92■■□□□ 1.26
IFT20-206ENST00000578122 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
IFT20-206ENST00000578122 NOS1P29475 1434 aa22.91■■□□□ 1.26
IFT20-206ENST00000578122 SYNMO15061 1565 aa22.9■■□□□ 1.26
IFT20-206ENST00000578122 SLC4A1APQ9BWU0 796 aaKnown RBP22.9■■□□□ 1.26
IFT20-206ENST00000578122 HRCP23327 699 aa22.87■■□□□ 1.25
IFT20-206ENST00000578122 PKD2Q13563 968 aa22.87■■□□□ 1.25
IFT20-206ENST00000578122 RNF39Q9H2S5 420 aa22.86■■□□□ 1.25
IFT20-206ENST00000578122 SPHKAPQ2M3C7 1700 aa22.85■■□□□ 1.25
IFT20-206ENST00000578122 MPHOSPH9Q99550 1183 aa22.84■■□□□ 1.25
IFT20-206ENST00000578122 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
IFT20-206ENST00000578122 PIK3C2BO00750 1634 aa22.83■■□□□ 1.25
IFT20-206ENST00000578122 IDI1Q13907 227 aa22.83■■□□□ 1.25
IFT20-206ENST00000578122 SLC52A1Q9NWF4 448 aa22.83■■□□□ 1.25
IFT20-206ENST00000578122 UBR1Q8IWV7 1749 aa22.82■■□□□ 1.24
IFT20-206ENST00000578122 THEMISQ8N1K5 641 aaPredicted RBP22.82■■□□□ 1.24
IFT20-206ENST00000578122 PTPRTO14522 1441 aa22.81■■□□□ 1.24
IFT20-206ENST00000578122 STRCQ7RTU9 1775 aa22.8■■□□□ 1.24
IFT20-206ENST00000578122 STAG3Q9UJ98 1225 aa22.79■■□□□ 1.24
IFT20-206ENST00000578122 PLA2R1Q13018 1463 aa22.78■■□□□ 1.24
IFT20-206ENST00000578122 KDM5AP29375 1690 aaKnown RBP22.77■■□□□ 1.24
IFT20-206ENST00000578122 ADGRB3O60242 1522 aa22.76■■□□□ 1.23
IFT20-206ENST00000578122 TRPM2O94759 1503 aa22.76■■□□□ 1.23
IFT20-206ENST00000578122 MYO5BQ9ULV0 1848 aa22.75■■□□□ 1.23
IFT20-206ENST00000578122 NCKAP5LQ9HCH0 1330 aa22.74■■□□□ 1.23
IFT20-206ENST00000578122 TMEM131LA2VDJ0 1609 aa22.72■■□□□ 1.23
IFT20-206ENST00000578122 CLTCL1P53675 1640 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms