RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 STRCQ7RTU9 1775 aa34.06■■■■□ 3.04
SMARCD2-206ENST00000577990 EIF2AK4Q9P2K8 1649 aaKnown RBP34.04■■■■□ 3.04
SMARCD2-206ENST00000577990 CHIC2Q9UKJ5 165 aa34.04■■■■□ 3.04
SMARCD2-206ENST00000577990 PPP6R1Q9UPN7 881 aa34.04■■■■□ 3.04
SMARCD2-206ENST00000577990 ZMYM3Q14202 1370 aa34.03■■■■□ 3.04
SMARCD2-206ENST00000577990 ANKRD30AQ9BXX3 1397 aa34.03■■■■□ 3.04
SMARCD2-206ENST00000577990 RRP7BPQ9NSQ0 103 aa34.02■■■■□ 3.04
SMARCD2-206ENST00000577990 ADGRL2O95490 1459 aa34.01■■■■□ 3.03
SMARCD2-206ENST00000577990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34■■■■□ 3.03
SMARCD2-206ENST00000577990 RNF17Q9BXT8 1623 aaKnown RBP33.99■■■■□ 3.03
SMARCD2-206ENST00000577990 NCOA1Q15788 1441 aa33.98■■■■□ 3.03
SMARCD2-206ENST00000577990 ERBINQ96RT1 1412 aa33.97■■■■□ 3.03
SMARCD2-206ENST00000577990 FAM135AQ9P2D6 1515 aa33.97■■■■□ 3.03
SMARCD2-206ENST00000577990 NPATQ14207 1427 aa33.96■■■■□ 3.03
SMARCD2-206ENST00000577990 RRBP1Q9P2E9 1410 aaKnown RBP33.96■■■■□ 3.03
SMARCD2-206ENST00000577990 PTPRKQ15262 1439 aa33.95■■■■□ 3.02
SMARCD2-206ENST00000577990 KDM5DQ9BY66 1539 aa33.94■■■■□ 3.02
SMARCD2-206ENST00000577990 MYO3AQ8NEV4 1616 aa33.92■■■■□ 3.02
SMARCD2-206ENST00000577990 MROH1Q8NDA8 1641 aa33.89■■■■□ 3.02
SMARCD2-206ENST00000577990 WASHC2CQ9Y4E1 1318 aa33.87■■■■□ 3.01
SMARCD2-206ENST00000577990 FBXO41Q8TF61 875 aa33.87■■■■□ 3.01
SMARCD2-206ENST00000577990 ZNF142P52746 1687 aaPredicted RBP33.87■■■■□ 3.01
SMARCD2-206ENST00000577990 ITGAEP38570 1179 aa33.85■■■■□ 3.01
SMARCD2-206ENST00000577990 ROCK1Q13464 1354 aa33.85■■■■□ 3.01
SMARCD2-206ENST00000577990 ZC3H13Q5T200 1668 aaKnown RBP33.84■■■■□ 3.01
SMARCD2-206ENST00000577990 CAMSAP1Q5T5Y3 1602 aa33.83■■■■□ 3.01
SMARCD2-206ENST00000577990 ABCC3O15438 1527 aa33.82■■■■□ 3
SMARCD2-206ENST00000577990 PRDM15P57071 1507 aaPredicted RBP33.82■■■■□ 3
SMARCD2-206ENST00000577990 DEPDC5O75140 1603 aa33.82■■■■□ 3
SMARCD2-206ENST00000577990 CEP170BQ9Y4F5 1589 aaPredicted RBP33.81■■■■□ 3
SMARCD2-206ENST00000577990 ANKRD50Q9ULJ7 1429 aa33.79■■■■□ 3
SMARCD2-206ENST00000577990 DMRT2Q9Y5R5 561 aa33.79■■■■□ 3
SMARCD2-206ENST00000577990 PZPP20742 1482 aa33.76■■■■□ 3
SMARCD2-206ENST00000577990 CEP152O94986 1710 aa33.76■■■■□ 3
SMARCD2-206ENST00000577990 PTPRTO14522 1441 aa33.74■■■□□ 2.99
SMARCD2-206ENST00000577990 CERKQ8TCT0 537 aa33.74■■■□□ 2.99
SMARCD2-206ENST00000577990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.73■■■□□ 2.99
SMARCD2-206ENST00000577990 KANK1Q14678 1352 aa33.72■■■□□ 2.99
SMARCD2-206ENST00000577990 FBXO31Q5XUX0 539 aaPredicted RBP33.71■■■□□ 2.99
SMARCD2-206ENST00000577990 VWDEQ8N2E2 1590 aa33.68■■■□□ 2.98
SMARCD2-206ENST00000577990 NCKAP5LQ9HCH0 1330 aa33.67■■■□□ 2.98
SMARCD2-206ENST00000577990 A2ML1A8K2U0 1454 aa33.67■■■□□ 2.98
SMARCD2-206ENST00000577990 TNRQ92752 1358 aa33.66■■■□□ 2.98
SMARCD2-206ENST00000577990 LMTK2Q8IWU2 1503 aa33.63■■■□□ 2.97
SMARCD2-206ENST00000577990 PLA2R1Q13018 1463 aa33.63■■■□□ 2.97
SMARCD2-206ENST00000577990 CFAP65Q6ZU64 1925 aaKnown RBP33.61■■■□□ 2.97
SMARCD2-206ENST00000577990 UNC13BO14795 1591 aa33.61■■■□□ 2.97
SMARCD2-206ENST00000577990 ARHGAP31Q2M1Z3 1444 aa33.61■■■□□ 2.97
SMARCD2-206ENST00000577990 SPATA31D1Q6ZQQ2 1576 aa33.59■■■□□ 2.97
SMARCD2-206ENST00000577990 ERVK-7P63135 1459 aa33.58■■■□□ 2.97
SMARCD2-206ENST00000577990 LTBP4Q8N2S1 1624 aa33.57■■■□□ 2.97
SMARCD2-206ENST00000577990 POLR1AO95602 1720 aaPredicted RBP33.56■■■□□ 2.96
SMARCD2-206ENST00000577990 GCC2Q8IWJ2 1684 aa33.55■■■□□ 2.96
SMARCD2-206ENST00000577990 NAIPQ13075 1403 aa33.53■■■□□ 2.96
SMARCD2-206ENST00000577990 EFCAB6Q5THR3 1501 aa33.53■■■□□ 2.96
SMARCD2-206ENST00000577990 PKD2Q13563 968 aa33.52■■■□□ 2.96
SMARCD2-206ENST00000577990 NLRP1Q9C000 1473 aa33.5■■■□□ 2.95
SMARCD2-206ENST00000577990 HFM1A2PYH4 1435 aa33.49■■■□□ 2.95
SMARCD2-206ENST00000577990 TET3O43151 1660 aa33.48■■■□□ 2.95
SMARCD2-206ENST00000577990 UGGT1Q9NYU2 1555 aa33.47■■■□□ 2.95
SMARCD2-206ENST00000577990 IQGAP3Q86VI3 1631 aa33.47■■■□□ 2.95
SMARCD2-206ENST00000577990 NEURL4Q96JN8 1562 aa33.47■■■□□ 2.95
SMARCD2-206ENST00000577990 ZNF335Q9H4Z2 1342 aaPredicted RBP33.46■■■□□ 2.95
SMARCD2-206ENST00000577990 NUP155O75694 1391 aa33.44■■■□□ 2.94
SMARCD2-206ENST00000577990 RPRD2Q5VT52 1461 aaKnown RBP33.42■■■□□ 2.94
SMARCD2-206ENST00000577990 NOS1P29475 1434 aa33.37■■■□□ 2.93
SMARCD2-206ENST00000577990 THEMISQ8N1K5 641 aaPredicted RBP33.36■■■□□ 2.93
SMARCD2-206ENST00000577990 UBR1Q8IWV7 1749 aa33.36■■■□□ 2.93
SMARCD2-206ENST00000577990 SYNMO15061 1565 aa33.35■■■□□ 2.93
SMARCD2-206ENST00000577990 E9PCH4 1651 aa33.34■■■□□ 2.93
SMARCD2-206ENST00000577990 IQSEC2Q5JU85 1478 aa33.33■■■□□ 2.93
SMARCD2-206ENST00000577990 ANKLE2Q86XL3 938 aa33.32■■■□□ 2.92
SMARCD2-206ENST00000577990 PIK3C2BO00750 1634 aa33.28■■■□□ 2.92
SMARCD2-206ENST00000577990 IQGAP1P46940 1657 aa33.28■■■□□ 2.92
SMARCD2-206ENST00000577990 NPHP4O75161 1426 aaPredicted RBP33.26■■■□□ 2.91
SMARCD2-206ENST00000577990 MED14O60244 1454 aa33.25■■■□□ 2.91
SMARCD2-206ENST00000577990 TRIM52Q96A61 297 aa33.24■■■□□ 2.91
SMARCD2-206ENST00000577990 IDI1Q13907 227 aa33.23■■■□□ 2.91
SMARCD2-206ENST00000577990 SLC52A1Q9NWF4 448 aa33.23■■■□□ 2.91
SMARCD2-206ENST00000577990 KDM5AP29375 1690 aaKnown RBP33.21■■■□□ 2.91
SMARCD2-206ENST00000577990 STAG3Q9UJ98 1225 aa33.19■■■□□ 2.9
SMARCD2-206ENST00000577990 SETD5Q9C0A6 1442 aa33.19■■■□□ 2.9
SMARCD2-206ENST00000577990 ADGRB3O60242 1522 aa33.18■■■□□ 2.9
SMARCD2-206ENST00000577990 SLIT1O75093 1534 aa33.15■■■□□ 2.9
SMARCD2-206ENST00000577990 CPS1P31327 1500 aa33.15■■■□□ 2.9
SMARCD2-206ENST00000577990 ARHGAP23Q9P227 1491 aa33.15■■■□□ 2.9
SMARCD2-206ENST00000577990 STRCP1A6NGW2 1772 aa33.14■■■□□ 2.9
SMARCD2-206ENST00000577990 SPHKAPQ2M3C7 1700 aa33.14■■■□□ 2.9
SMARCD2-206ENST00000577990 SCAF11Q99590 1463 aaKnown RBP33.14■■■□□ 2.9
SMARCD2-206ENST00000577990 UBAP1LF5GYI3 381 aa33.12■■■□□ 2.89
SMARCD2-206ENST00000577990 SLC4A1APQ9BWU0 796 aaKnown RBP33.11■■■□□ 2.89
SMARCD2-206ENST00000577990 TMEM2Q9UHN6 1383 aa33.1■■■□□ 2.89
SMARCD2-206ENST00000577990 LTKP29376 864 aa33.09■■■□□ 2.89
SMARCD2-206ENST00000577990 ACIN1Q9UKV3 1341 aaKnown RBP33.08■■■□□ 2.89
SMARCD2-206ENST00000577990 TMEM131LA2VDJ0 1609 aa33.07■■■□□ 2.88
SMARCD2-206ENST00000577990 RAB3GAP2Q9H2M9 1393 aa33.07■■■□□ 2.88
SMARCD2-206ENST00000577990 TXNDC2Q86VQ3 553 aa33.06■■■□□ 2.88
SMARCD2-206ENST00000577990 MYO5BQ9ULV0 1848 aa33.06■■■□□ 2.88
SMARCD2-206ENST00000577990 TRPM2O94759 1503 aa33.04■■■□□ 2.88
SMARCD2-206ENST00000577990 EID1Q9Y6B2 187 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms