RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 ADGBQ8N7X0 1667 aa23.26■■□□□ 1.31
PPP4R1-206ENST00000577779 TNRQ92752 1358 aa23.26■■□□□ 1.31
PPP4R1-206ENST00000577779 ANKLE2Q86XL3 938 aa23.25■■□□□ 1.31
PPP4R1-206ENST00000577779 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
PPP4R1-206ENST00000577779 FBXO31Q5XUX0 539 aaPredicted RBP23.22■■□□□ 1.31
PPP4R1-206ENST00000577779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.22■■□□□ 1.311e-18■■■■□ 20.3
PPP4R1-206ENST00000577779 FYCO1Q9BQS8 1478 aa23.19■■□□□ 1.3
PPP4R1-206ENST00000577779 NPHP4O75161 1426 aaPredicted RBP23.19■■□□□ 1.3
PPP4R1-206ENST00000577779 THEMISQ8N1K5 641 aaPredicted RBP23.19■■□□□ 1.3
PPP4R1-206ENST00000577779 CCNB3Q8WWL7 1395 aa23.17■■□□□ 1.3
PPP4R1-206ENST00000577779 MED14O60244 1454 aa23.17■■□□□ 1.3
PPP4R1-206ENST00000577779 PZPP20742 1482 aa23.17■■□□□ 1.3
PPP4R1-206ENST00000577779 DEPDC5O75140 1603 aa23.15■■□□□ 1.3
PPP4R1-206ENST00000577779 RGS17Q9UGC6 210 aaPredicted RBP23.15■■□□□ 1.3
PPP4R1-206ENST00000577779 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-206ENST00000577779 UGGT1Q9NYU2 1555 aa23.14■■□□□ 1.29
PPP4R1-206ENST00000577779 DHX29Q7Z478 1369 aaKnown RBP23.14■■□□□ 1.29
PPP4R1-206ENST00000577779 LRRC7Q96NW7 1537 aa23.13■■□□□ 1.29
PPP4R1-206ENST00000577779 KDM5DQ9BY66 1539 aa23.13■■□□□ 1.29
PPP4R1-206ENST00000577779 FAM135AQ9P2D6 1515 aa23.13■■□□□ 1.29
PPP4R1-206ENST00000577779 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
PPP4R1-206ENST00000577779 NLRP1Q9C000 1473 aa23.12■■□□□ 1.29
PPP4R1-206ENST00000577779 STRCP1A6NGW2 1772 aa23.12■■□□□ 1.29
PPP4R1-206ENST00000577779 MIA2Q96PC5 1412 aa23.11■■□□□ 1.29
PPP4R1-206ENST00000577779 KIF3BO15066 747 aa23.11■■□□□ 1.29
PPP4R1-206ENST00000577779 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
PPP4R1-206ENST00000577779 SYNMO15061 1565 aa23.1■■□□□ 1.29
PPP4R1-206ENST00000577779 ZNF644Q9H582 1327 aaPredicted RBP23.09■■□□□ 1.29
PPP4R1-206ENST00000577779 RTEL1-TNFRSF6BF6WH68 1400 aa23.09■■□□□ 1.29
PPP4R1-206ENST00000577779 MBD5Q9P267 1494 aa23.07■■□□□ 1.28
PPP4R1-206ENST00000577779 MTUS2Q5JR59 1369 aa23.03■■□□□ 1.28
PPP4R1-206ENST00000577779 TIAM1Q13009 1591 aa23.01■■□□□ 1.27
PPP4R1-206ENST00000577779 POTEAQ6S8J7 498 aa23■■□□□ 1.27
PPP4R1-206ENST00000577779 ZC3H13Q5T200 1668 aaKnown RBP22.97■■□□□ 1.27
PPP4R1-206ENST00000577779 CCDC141Q6ZP82 1450 aa22.96■■□□□ 1.27
PPP4R1-206ENST00000577779 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
PPP4R1-206ENST00000577779 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
PPP4R1-206ENST00000577779 SCAF11Q99590 1463 aaKnown RBP22.9■■□□□ 1.26
PPP4R1-206ENST00000577779 EHBP1L1Q8N3D4 1523 aa22.89■■□□□ 1.26
PPP4R1-206ENST00000577779 SETD1AO15047 1707 aaKnown RBP22.88■■□□□ 1.25
PPP4R1-206ENST00000577779 ABCC3O15438 1527 aa22.88■■□□□ 1.25
PPP4R1-206ENST00000577779 ERVK-7P63135 1459 aa22.88■■□□□ 1.25
PPP4R1-206ENST00000577779 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
PPP4R1-206ENST00000577779 CAMSAP2Q08AD1 1489 aa22.87■■□□□ 1.25
PPP4R1-206ENST00000577779 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
PPP4R1-206ENST00000577779 CEP162Q5TB80 1403 aa22.86■■□□□ 1.25
PPP4R1-206ENST00000577779 LTKP29376 864 aa22.84■■□□□ 1.25
PPP4R1-206ENST00000577779 TXNDC2Q86VQ3 553 aa22.84■■□□□ 1.25
PPP4R1-206ENST00000577779 CFAP65Q6ZU64 1925 aaKnown RBP22.83■■□□□ 1.25
PPP4R1-206ENST00000577779 ROBO1Q9Y6N7 1651 aa22.82■■□□□ 1.24
PPP4R1-206ENST00000577779 NCOA2Q15596 1464 aa22.82■■□□□ 1.24
PPP4R1-206ENST00000577779 TSPY4P0CV99 314 aa22.82■■□□□ 1.24
PPP4R1-206ENST00000577779 TSPY10P0CW01 314 aa22.82■■□□□ 1.24
PPP4R1-206ENST00000577779 ARHGAP23Q9P227 1491 aa22.81■■□□□ 1.24
PPP4R1-206ENST00000577779 SLIT1O75093 1534 aa22.81■■□□□ 1.24
PPP4R1-206ENST00000577779 FOXD1Q16676 465 aa22.8■■□□□ 1.24
PPP4R1-206ENST00000577779 EID1Q9Y6B2 187 aa22.8■■□□□ 1.24
PPP4R1-206ENST00000577779 SRCAPQ6ZRS2 3230 aa22.8■■□□□ 1.24
PPP4R1-206ENST00000577779 TMEM94Q12767 1356 aa22.79■■□□□ 1.24
PPP4R1-206ENST00000577779 ARHGEF5Q12774 1597 aa22.79■■□□□ 1.24
PPP4R1-206ENST00000577779 CEP152O94986 1710 aa22.77■■□□□ 1.23
PPP4R1-206ENST00000577779 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
PPP4R1-206ENST00000577779 MROH1Q8NDA8 1641 aa22.74■■□□□ 1.23
PPP4R1-206ENST00000577779 LRRC9Q6ZRR7 1453 aa22.73■■□□□ 1.23
PPP4R1-206ENST00000577779 PROSER2Q86WR7 435 aaPredicted RBP22.72■■□□□ 1.23
PPP4R1-206ENST00000577779 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
PPP4R1-206ENST00000577779 KCNA6P17658 529 aa22.7■■□□□ 1.22
PPP4R1-206ENST00000577779 UPF1Q92900 1129 aaKnown RBP eCLIP22.7■■□□□ 1.22
PPP4R1-206ENST00000577779 RBM33Q96EV2 1170 aaKnown RBP22.7■■□□□ 1.22
PPP4R1-206ENST00000577779 JCADQ9P266 1359 aa22.7■■□□□ 1.22
PPP4R1-206ENST00000577779 PHLPP1O60346 1717 aa22.7■■□□□ 1.22
PPP4R1-206ENST00000577779 TMEM2Q9UHN6 1383 aa22.69■■□□□ 1.22
PPP4R1-206ENST00000577779 MAST1Q9Y2H9 1570 aa22.68■■□□□ 1.22
PPP4R1-206ENST00000577779 PIK3C2BO00750 1634 aa22.68■■□□□ 1.22
PPP4R1-206ENST00000577779 STAG3Q9UJ98 1225 aa22.67■■□□□ 1.22
PPP4R1-206ENST00000577779 ARHGAP31Q2M1Z3 1444 aa22.65■■□□□ 1.22
PPP4R1-206ENST00000577779 SLC26A8Q96RN1 970 aa22.65■■□□□ 1.22
PPP4R1-206ENST00000577779 PRDM15P57071 1507 aaPredicted RBP22.65■■□□□ 1.22
PPP4R1-206ENST00000577779 MSH6P52701 1360 aa22.64■■□□□ 1.22
PPP4R1-206ENST00000577779 TRIM52Q96A61 297 aa22.64■■□□□ 1.21
PPP4R1-206ENST00000577779 SLAIN2Q9P270 581 aa22.64■■□□□ 1.21
PPP4R1-206ENST00000577779 NKTRP30414 1462 aaKnown RBP22.62■■□□□ 1.21
PPP4R1-206ENST00000577779 MEX3CQ5U5Q3 659 aaKnown RBP22.61■■□□□ 1.21
PPP4R1-206ENST00000577779 ZNF772Q68DY9 489 aaPredicted RBP22.61■■□□□ 1.21
PPP4R1-206ENST00000577779 TET3O43151 1660 aa22.61■■□□□ 1.21
PPP4R1-206ENST00000577779 EFCAB6Q5THR3 1501 aa22.61■■□□□ 1.21
PPP4R1-206ENST00000577779 DUOX2Q9NRD8 1548 aa22.6■■□□□ 1.21
PPP4R1-206ENST00000577779 LRP6O75581 1613 aa22.59■■□□□ 1.21
PPP4R1-206ENST00000577779 NWD1Q149M9 1564 aa22.59■■□□□ 1.21
PPP4R1-206ENST00000577779 KDM5AP29375 1690 aaKnown RBP22.58■■□□□ 1.21
PPP4R1-206ENST00000577779 COL16A1Q07092 1604 aaPredicted RBP22.58■■□□□ 1.21
PPP4R1-206ENST00000577779 SPATA31A6Q5VVP1 1343 aa22.57■■□□□ 1.2
PPP4R1-206ENST00000577779 BCANQ96GW7 911 aa22.55■■□□□ 1.2
PPP4R1-206ENST00000577779 IDI1Q13907 227 aa22.54■■□□□ 1.2
PPP4R1-206ENST00000577779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.54■■□□□ 1.22e-6■■□□□ 14.2
PPP4R1-206ENST00000577779 FGD6Q6ZV73 1430 aa22.54■■□□□ 1.2
PPP4R1-206ENST00000577779 RXRBP28702 533 aa22.53■■□□□ 1.2
PPP4R1-206ENST00000577779 KIF15Q9NS87 1388 aa22.51■■□□□ 1.19
PPP4R1-206ENST00000577779 ERBINQ96RT1 1412 aa22.5■■□□□ 1.19
PPP4R1-206ENST00000577779 KANK1Q14678 1352 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms