RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 KIF3BO15066 747 aa19.47■□□□□ 0.71
CSNK1D-206ENST00000577578 DNMT1P26358 1616 aaKnown RBP19.47■□□□□ 0.71
CSNK1D-206ENST00000577578 ABCC5O15440 1437 aa19.46■□□□□ 0.71
CSNK1D-206ENST00000577578 ZNF142P52746 1687 aaPredicted RBP19.46■□□□□ 0.71
CSNK1D-206ENST00000577578 MYO3AQ8NEV4 1616 aa19.45■□□□□ 0.7
CSNK1D-206ENST00000577578 DUOX2Q9NRD8 1548 aa19.43■□□□□ 0.7
CSNK1D-206ENST00000577578 DAPK1P53355 1430 aa19.42■□□□□ 0.7
CSNK1D-206ENST00000577578 ILDR1Q86SU0 546 aaPredicted RBP19.42■□□□□ 0.7
CSNK1D-206ENST00000577578 MROH1Q8NDA8 1641 aa19.42■□□□□ 0.7
CSNK1D-206ENST00000577578 ZC3H13Q5T200 1668 aaKnown RBP19.42■□□□□ 0.7
CSNK1D-206ENST00000577578 PZPP20742 1482 aa19.41■□□□□ 0.7
CSNK1D-206ENST00000577578 CEP170BQ9Y4F5 1589 aaPredicted RBP19.4■□□□□ 0.7
CSNK1D-206ENST00000577578 NCOA1Q15788 1441 aa19.4■□□□□ 0.7
CSNK1D-206ENST00000577578 ABCC3O15438 1527 aa19.38■□□□□ 0.69
CSNK1D-206ENST00000577578 KIF15Q9NS87 1388 aa19.38■□□□□ 0.69
CSNK1D-206ENST00000577578 WASHC2CQ9Y4E1 1318 aa19.38■□□□□ 0.69
CSNK1D-206ENST00000577578 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
CSNK1D-206ENST00000577578 CAMSAP1Q5T5Y3 1602 aa19.37■□□□□ 0.69
CSNK1D-206ENST00000577578 PTPRTO14522 1441 aa19.37■□□□□ 0.69
CSNK1D-206ENST00000577578 ERBINQ96RT1 1412 aa19.37■□□□□ 0.69
CSNK1D-206ENST00000577578 PRDM15P57071 1507 aaPredicted RBP19.35■□□□□ 0.69
CSNK1D-206ENST00000577578 PLA2R1Q13018 1463 aa19.35■□□□□ 0.69
CSNK1D-206ENST00000577578 DEPDC5O75140 1603 aa19.35■□□□□ 0.69
CSNK1D-206ENST00000577578 A2ML1A8K2U0 1454 aa19.34■□□□□ 0.69
CSNK1D-206ENST00000577578 ADGRL2O95490 1459 aa19.34■□□□□ 0.69
CSNK1D-206ENST00000577578 TNRQ92752 1358 aa19.32■□□□□ 0.68
CSNK1D-206ENST00000577578 CEP152O94986 1710 aa19.32■□□□□ 0.68
CSNK1D-206ENST00000577578 FBXO31Q5XUX0 539 aaPredicted RBP19.32■□□□□ 0.68
CSNK1D-206ENST00000577578 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
CSNK1D-206ENST00000577578 SPATA31D1Q6ZQQ2 1576 aa19.31■□□□□ 0.68
CSNK1D-206ENST00000577578 FBXO41Q8TF61 875 aa19.3■□□□□ 0.68
CSNK1D-206ENST00000577578 RRP7BPQ9NSQ0 103 aa19.3■□□□□ 0.68
CSNK1D-206ENST00000577578 NLRP1Q9C000 1473 aa19.28■□□□□ 0.68
CSNK1D-206ENST00000577578 ARHGAP31Q2M1Z3 1444 aa19.26■□□□□ 0.67
CSNK1D-206ENST00000577578 PKD2Q13563 968 aa19.26■□□□□ 0.67
CSNK1D-206ENST00000577578 ERVK-7P63135 1459 aa19.26■□□□□ 0.67
CSNK1D-206ENST00000577578 VWDEQ8N2E2 1590 aa19.26■□□□□ 0.67
CSNK1D-206ENST00000577578 FAM50AQ14320 339 aaKnown RBP19.25■□□□□ 0.67
CSNK1D-206ENST00000577578 CERKQ8TCT0 537 aa19.25■□□□□ 0.67
CSNK1D-206ENST00000577578 CHIC2Q9UKJ5 165 aa19.25■□□□□ 0.67
CSNK1D-206ENST00000577578 POLR1AO95602 1720 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-206ENST00000577578 LTBP4Q8N2S1 1624 aa19.24■□□□□ 0.67
CSNK1D-206ENST00000577578 LMTK2Q8IWU2 1503 aa19.24■□□□□ 0.67
CSNK1D-206ENST00000577578 CFAP65Q6ZU64 1925 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-206ENST00000577578 UGGT1Q9NYU2 1555 aa19.22■□□□□ 0.67
CSNK1D-206ENST00000577578 NCKAP5LQ9HCH0 1330 aa19.22■□□□□ 0.67
CSNK1D-206ENST00000577578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.21■□□□□ 0.674e-6■■■■□ 23.1
CSNK1D-206ENST00000577578 NEURL4Q96JN8 1562 aa19.21■□□□□ 0.67
CSNK1D-206ENST00000577578 KANK1Q14678 1352 aa19.19■□□□□ 0.66
CSNK1D-206ENST00000577578 ANKRD50Q9ULJ7 1429 aa19.19■□□□□ 0.66
CSNK1D-206ENST00000577578 ROCK1Q13464 1354 aa19.19■□□□□ 0.66
CSNK1D-206ENST00000577578 UBR1Q8IWV7 1749 aa19.17■□□□□ 0.66
CSNK1D-206ENST00000577578 THEMISQ8N1K5 641 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-206ENST00000577578 EFCAB6Q5THR3 1501 aa19.16■□□□□ 0.66
CSNK1D-206ENST00000577578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.66
CSNK1D-206ENST00000577578 MED14O60244 1454 aa19.16■□□□□ 0.66
CSNK1D-206ENST00000577578 IQSEC2Q5JU85 1478 aa19.16■□□□□ 0.66
CSNK1D-206ENST00000577578 UNC13BO14795 1591 aa19.15■□□□□ 0.66
CSNK1D-206ENST00000577578 KDM5AP29375 1690 aaKnown RBP19.13■□□□□ 0.65
CSNK1D-206ENST00000577578 RPRD2Q5VT52 1461 aaKnown RBP19.11■□□□□ 0.65
CSNK1D-206ENST00000577578 NOS1P29475 1434 aa19.11■□□□□ 0.65
CSNK1D-206ENST00000577578 RRBP1Q9P2E9 1410 aaKnown RBP19.11■□□□□ 0.65
CSNK1D-206ENST00000577578 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
CSNK1D-206ENST00000577578 ANKLE2Q86XL3 938 aa19.11■□□□□ 0.65
CSNK1D-206ENST00000577578 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
CSNK1D-206ENST00000577578 TET3O43151 1660 aa19.11■□□□□ 0.65
CSNK1D-206ENST00000577578 SYNMO15061 1565 aa19.1■□□□□ 0.65
CSNK1D-206ENST00000577578 PIK3C2BO00750 1634 aa19.1■□□□□ 0.65
CSNK1D-206ENST00000577578 SLIT1O75093 1534 aa19.1■□□□□ 0.65
CSNK1D-206ENST00000577578 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
CSNK1D-206ENST00000577578 IQGAP1P46940 1657 aa19.08■□□□□ 0.65
CSNK1D-206ENST00000577578 GCC2Q8IWJ2 1684 aa19.08■□□□□ 0.65
CSNK1D-206ENST00000577578 NPHP4O75161 1426 aaPredicted RBP19.08■□□□□ 0.64
CSNK1D-206ENST00000577578 IQGAP3Q86VI3 1631 aa19.06■□□□□ 0.64
CSNK1D-206ENST00000577578 SCAF11Q99590 1463 aaKnown RBP19.04■□□□□ 0.64
CSNK1D-206ENST00000577578 CPS1P31327 1500 aa19.03■□□□□ 0.64
CSNK1D-206ENST00000577578 IDI1Q13907 227 aa19.02■□□□□ 0.64
CSNK1D-206ENST00000577578 E9PCH4 1651 aa19.01■□□□□ 0.63
CSNK1D-206ENST00000577578 ADGRB3O60242 1522 aa19.01■□□□□ 0.63
CSNK1D-206ENST00000577578 TMEM2Q9UHN6 1383 aa19.01■□□□□ 0.63
CSNK1D-206ENST00000577578 ITGAEP38570 1179 aa19■□□□□ 0.63
CSNK1D-206ENST00000577578 SLC52A1Q9NWF4 448 aa19■□□□□ 0.63
CSNK1D-206ENST00000577578 LTKP29376 864 aa18.99■□□□□ 0.63
CSNK1D-206ENST00000577578 STRCP1A6NGW2 1772 aa18.98■□□□□ 0.63
CSNK1D-206ENST00000577578 TXNDC2Q86VQ3 553 aa18.96■□□□□ 0.63
CSNK1D-206ENST00000577578 MYO5BQ9ULV0 1848 aa18.95■□□□□ 0.62
CSNK1D-206ENST00000577578 NUP155O75694 1391 aa18.95■□□□□ 0.62
CSNK1D-206ENST00000577578 NAIPQ13075 1403 aa18.95■□□□□ 0.62
CSNK1D-206ENST00000577578 TMEM131LA2VDJ0 1609 aa18.95■□□□□ 0.62
CSNK1D-206ENST00000577578 STAG3Q9UJ98 1225 aa18.94■□□□□ 0.62
CSNK1D-206ENST00000577578 EID1Q9Y6B2 187 aa18.94■□□□□ 0.62
CSNK1D-206ENST00000577578 HFM1A2PYH4 1435 aa18.91■□□□□ 0.62
CSNK1D-206ENST00000577578 ZFYVE9O95405 1425 aa18.91■□□□□ 0.62
CSNK1D-206ENST00000577578 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
CSNK1D-206ENST00000577578 SPHKAPQ2M3C7 1700 aa18.88■□□□□ 0.61
CSNK1D-206ENST00000577578 UBAP1LF5GYI3 381 aa18.88■□□□□ 0.61
CSNK1D-206ENST00000577578 ALKQ9UM73 1620 aa18.86■□□□□ 0.61
CSNK1D-206ENST00000577578 XIRP1Q702N8 1843 aaKnown RBP18.85■□□□□ 0.61
CSNK1D-206ENST00000577578 RIMS2Q9UQ26 1411 aa18.84■□□□□ 0.61
CSNK1D-206ENST00000577578 PLEKHG1Q9ULL1 1385 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms