RNA–Protein interactions for RNA: ENST00000577543.5

TGIF1-222, Transcript of TGFB induced factor homeobox 1, human

TSL 3 BASIC

Gene TGIF1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-222	ENST00000577543	ZMYM3	Q14202	1370 aa		29.8	■■■□□ 2.36
TGIF1-222	ENST00000577543	NPAT	Q14207	1427 aa		29.79	■■■□□ 2.36
TGIF1-222	ENST00000577543	KIF15	Q9NS87	1388 aa		29.79	■■■□□ 2.36
TGIF1-222	ENST00000577543	MYO3A	Q8NEV4	1616 aa		29.79	■■■□□ 2.36
TGIF1-222	ENST00000577543	PPP6R1	Q9UPN7	881 aa		29.79	■■■□□ 2.36
TGIF1-222	ENST00000577543	MROH1	Q8NDA8	1641 aa		29.78	■■■□□ 2.36
TGIF1-222	ENST00000577543	HSPA2	P54652	639 aa		29.76	■■■□□ 2.35
TGIF1-222	ENST00000577543	CEP152	O94986	1710 aa		29.76	■■■□□ 2.35
TGIF1-222	ENST00000577543	ZNF142	P52746	1687 aa	Predicted RBP	29.76	■■■□□ 2.35
TGIF1-222	ENST00000577543	FAM50A	Q14320	339 aa	Known RBP	29.75	■■■□□ 2.35
TGIF1-222	ENST00000577543	ERBIN	Q96RT1	1412 aa		29.75	■■■□□ 2.35
TGIF1-222	ENST00000577543	DEPDC5	O75140	1603 aa		29.72	■■■□□ 2.35
TGIF1-222	ENST00000577543	ADGRL2	O95490	1459 aa		29.72	■■■□□ 2.35
TGIF1-222	ENST00000577543	PTPRK	Q15262	1439 aa		29.71	■■■□□ 2.35
TGIF1-222	ENST00000577543	ABCC3	O15438	1527 aa		29.71	■■■□□ 2.35
TGIF1-222	ENST00000577543	PRDM15	P57071	1507 aa	Predicted RBP	29.71	■■■□□ 2.35
TGIF1-222	ENST00000577543	ANKRD30A	Q9BXX3	1397 aa		29.71	■■■□□ 2.35
TGIF1-222	ENST00000577543	PPARGC1B	Q86YN6	1023 aa	Known RBP	29.69	■■■□□ 2.34
TGIF1-222	ENST00000577543	CAMSAP1	Q5T5Y3	1602 aa		29.69	■■■□□ 2.34
TGIF1-222	ENST00000577543	PZP	P20742	1482 aa		29.68	■■■□□ 2.34
TGIF1-222	ENST00000577543	STRC	Q7RTU9	1775 aa		29.67	■■■□□ 2.34
TGIF1-222	ENST00000577543	RRP7BP	Q9NSQ0	103 aa		29.67	■■■□□ 2.34
TGIF1-222	ENST00000577543	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	29.67	■■■□□ 2.34
TGIF1-222	ENST00000577543	WASHC2C	Q9Y4E1	1318 aa		29.67	■■■□□ 2.34
TGIF1-222	ENST00000577543	CHIC2	Q9UKJ5	165 aa		29.66	■■■□□ 2.34
TGIF1-222	ENST00000577543	NCOA1	Q15788	1441 aa		29.65	■■■□□ 2.34
TGIF1-222	ENST00000577543	CFAP65	Q6ZU64	1925 aa	Known RBP	29.6	■■■□□ 2.33
TGIF1-222	ENST00000577543	TNR	Q92752	1358 aa		29.54	■■■□□ 2.32
TGIF1-222	ENST00000577543	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.54	■■■□□ 2.32	3e-10	■■■■■ 42.9
TGIF1-222	ENST00000577543	SPATA31D1	Q6ZQQ2	1576 aa		29.54	■■■□□ 2.32
TGIF1-222	ENST00000577543	A2ML1	A8K2U0	1454 aa		29.53	■■■□□ 2.32
TGIF1-222	ENST00000577543	VWDE	Q8N2E2	1590 aa		29.52	■■■□□ 2.32
TGIF1-222	ENST00000577543	RRBP1	Q9P2E9	1410 aa	Known RBP	29.51	■■■□□ 2.31
TGIF1-222	ENST00000577543	ANKRD50	Q9ULJ7	1429 aa		29.51	■■■□□ 2.31
TGIF1-222	ENST00000577543	ERVK-7	P63135	1459 aa		29.5	■■■□□ 2.31
TGIF1-222	ENST00000577543	FBXO31	Q5XUX0	539 aa	Predicted RBP	29.5	■■■□□ 2.31
TGIF1-222	ENST00000577543	KANK1	Q14678	1352 aa		29.5	■■■□□ 2.31
TGIF1-222	ENST00000577543	ROCK1	Q13464	1354 aa		29.49	■■■□□ 2.31
TGIF1-222	ENST00000577543	POLR1A	O95602	1720 aa	Predicted RBP	29.48	■■■□□ 2.31
TGIF1-222	ENST00000577543	UNC13B	O14795	1591 aa		29.47	■■■□□ 2.31
TGIF1-222	ENST00000577543	LMTK2	Q8IWU2	1503 aa		29.47	■■■□□ 2.31
TGIF1-222	ENST00000577543	PLA2R1	Q13018	1463 aa		29.47	■■■□□ 2.31
TGIF1-222	ENST00000577543	NLRP1	Q9C000	1473 aa		29.47	■■■□□ 2.31
TGIF1-222	ENST00000577543	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	29.46	■■■□□ 2.31	6e-7	■■■■□ 22.8
TGIF1-222	ENST00000577543	EFCAB6	Q5THR3	1501 aa		29.45	■■■□□ 2.3
TGIF1-222	ENST00000577543	ARHGAP31	Q2M1Z3	1444 aa		29.44	■■■□□ 2.3
TGIF1-222	ENST00000577543	ITGAE	P38570	1179 aa		29.43	■■■□□ 2.3
TGIF1-222	ENST00000577543	TET3	O43151	1660 aa		29.4	■■■□□ 2.3
TGIF1-222	ENST00000577543	GCC2	Q8IWJ2	1684 aa		29.4	■■■□□ 2.3
TGIF1-222	ENST00000577543	UGGT1	Q9NYU2	1555 aa		29.4	■■■□□ 2.3
TGIF1-222	ENST00000577543	PTPRT	O14522	1441 aa		29.39	■■■□□ 2.3
TGIF1-222	ENST00000577543	DMRT2	Q9Y5R5	561 aa		29.39	■■■□□ 2.3
TGIF1-222	ENST00000577543	UBR1	Q8IWV7	1749 aa		29.37	■■■□□ 2.29
TGIF1-222	ENST00000577543	IQGAP3	Q86VI3	1631 aa		29.35	■■■□□ 2.29
TGIF1-222	ENST00000577543	NEURL4	Q96JN8	1562 aa		29.32	■■■□□ 2.28
TGIF1-222	ENST00000577543	PIK3C2B	O00750	1634 aa		29.31	■■■□□ 2.28
TGIF1-222	ENST00000577543	SYNM	O15061	1565 aa		29.31	■■■□□ 2.28
TGIF1-222	ENST00000577543	NCKAP5L	Q9HCH0	1330 aa		29.29	■■■□□ 2.28
TGIF1-222	ENST00000577543	PKD2	Q13563	968 aa		29.29	■■■□□ 2.28
TGIF1-222	ENST00000577543	RPRD2	Q5VT52	1461 aa	Known RBP	29.29	■■■□□ 2.28
TGIF1-222	ENST00000577543		E9PCH4	1651 aa		29.28	■■■□□ 2.28
TGIF1-222	ENST00000577543	KDM5A	P29375	1690 aa	Known RBP	29.28	■■■□□ 2.28
TGIF1-222	ENST00000577543	THEMIS	Q8N1K5	641 aa	Predicted RBP	29.23	■■■□□ 2.27
TGIF1-222	ENST00000577543	IQGAP1	P46940	1657 aa		29.22	■■■□□ 2.27
TGIF1-222	ENST00000577543	NOS1	P29475	1434 aa		29.22	■■■□□ 2.27
TGIF1-222	ENST00000577543	LTBP4	Q8N2S1	1624 aa		29.19	■■■□□ 2.26
TGIF1-222	ENST00000577543	ADGRB3	O60242	1522 aa		29.19	■■■□□ 2.26
TGIF1-222	ENST00000577543	NAIP	Q13075	1403 aa		29.19	■■■□□ 2.26
TGIF1-222	ENST00000577543	MYO5B	Q9ULV0	1848 aa		29.18	■■■□□ 2.26
TGIF1-222	ENST00000577543	ILDR1	Q86SU0	546 aa	Predicted RBP	29.18	■■■□□ 2.26
TGIF1-222	ENST00000577543	NUP155	O75694	1391 aa		29.16	■■■□□ 2.26
TGIF1-222	ENST00000577543	SLIT1	O75093	1534 aa		29.16	■■■□□ 2.26
TGIF1-222	ENST00000577543	HFM1	A2PYH4	1435 aa		29.16	■■■□□ 2.26
TGIF1-222	ENST00000577543	MED14	O60244	1454 aa		29.15	■■■□□ 2.26
TGIF1-222	ENST00000577543	ANKLE2	Q86XL3	938 aa		29.14	■■■□□ 2.26
TGIF1-222	ENST00000577543	SPHKAP	Q2M3C7	1700 aa		29.14	■■■□□ 2.25
TGIF1-222	ENST00000577543	ARHGAP23	Q9P227	1491 aa		29.13	■■■□□ 2.25
TGIF1-222	ENST00000577543	CERK	Q8TCT0	537 aa		29.13	■■■□□ 2.25
TGIF1-222	ENST00000577543	NPHP4	O75161	1426 aa	Predicted RBP	29.12	■■■□□ 2.25
TGIF1-222	ENST00000577543	SCAF11	Q99590	1463 aa	Known RBP	29.12	■■■□□ 2.25
TGIF1-222	ENST00000577543	FBXO41	Q8TF61	875 aa		29.09	■■■□□ 2.25
TGIF1-222	ENST00000577543	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	29.08	■■■□□ 2.25
TGIF1-222	ENST00000577543	STAG3	Q9UJ98	1225 aa		29.07	■■■□□ 2.24
TGIF1-222	ENST00000577543	IDI1	Q13907	227 aa		29.06	■■■□□ 2.24
TGIF1-222	ENST00000577543	TMEM131L	A2VDJ0	1609 aa		29.05	■■■□□ 2.24
TGIF1-222	ENST00000577543	TMEM2	Q9UHN6	1383 aa		29.04	■■■□□ 2.24
TGIF1-222	ENST00000577543	SLC52A1	Q9NWF4	448 aa		29.04	■■■□□ 2.24
TGIF1-222	ENST00000577543	IQSEC2	Q5JU85	1478 aa		29.03	■■■□□ 2.24
TGIF1-222	ENST00000577543	CPS1	P31327	1500 aa		28.99	■■■□□ 2.23
TGIF1-222	ENST00000577543	STRCP1	A6NGW2	1772 aa		28.98	■■■□□ 2.23
TGIF1-222	ENST00000577543	EID1	Q9Y6B2	187 aa		28.97	■■■□□ 2.23
TGIF1-222	ENST00000577543	LTK	P29376	864 aa		28.96	■■■□□ 2.23
TGIF1-222	ENST00000577543	TXNDC2	Q86VQ3	553 aa		28.96	■■■□□ 2.23
TGIF1-222	ENST00000577543	TRPM2	O94759	1503 aa		28.94	■■■□□ 2.22
TGIF1-222	ENST00000577543	CLTCL1	P53675	1640 aa		28.93	■■■□□ 2.22
TGIF1-222	ENST00000577543	KIF1B	O60333	1816 aa		28.91	■■■□□ 2.22
TGIF1-222	ENST00000577543	ZFYVE9	O95405	1425 aa		28.91	■■■□□ 2.22
TGIF1-222	ENST00000577543	TRIM52	Q96A61	297 aa		28.9	■■■□□ 2.22
TGIF1-222	ENST00000577543	RIMS2	Q9UQ26	1411 aa		28.88	■■■□□ 2.21
TGIF1-222	ENST00000577543	CHGA	P10645	457 aa	Known RBP	28.86	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms