RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 RIMS1Q86UR5 1692 aaKnown RBP30.24■■■□□ 2.43
SUPT4H1-202ENST00000577396 ESF1Q9H501 851 aaKnown RBP30.23■■■□□ 2.43
SUPT4H1-202ENST00000577396 CNTLNQ9NXG0 1405 aa30.22■■■□□ 2.43
SUPT4H1-202ENST00000577396 MROH1Q8NDA8 1641 aa30.22■■■□□ 2.43
SUPT4H1-202ENST00000577396 NAIPQ13075 1403 aa30.22■■■□□ 2.43
SUPT4H1-202ENST00000577396 WASHC2CQ9Y4E1 1318 aa30.19■■■□□ 2.42
SUPT4H1-202ENST00000577396 AEBP2Q6ZN18 517 aaPredicted RBP30.19■■■□□ 2.42
SUPT4H1-202ENST00000577396 HFM1A2PYH4 1435 aa30.19■■■□□ 2.42
SUPT4H1-202ENST00000577396 CEBPAP49715 358 aaPredicted RBP30.18■■■□□ 2.42
SUPT4H1-202ENST00000577396 ZMYM3Q14202 1370 aa30.18■■■□□ 2.42
SUPT4H1-202ENST00000577396 DEPDC5O75140 1603 aa30.17■■■□□ 2.42
SUPT4H1-202ENST00000577396 FAM135AQ9P2D6 1515 aa30.16■■■□□ 2.42
SUPT4H1-202ENST00000577396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.15■■■□□ 2.425e-10■■■□□ 17.7
SUPT4H1-202ENST00000577396 PRDM15P57071 1507 aaPredicted RBP30.15■■■□□ 2.42
SUPT4H1-202ENST00000577396 CLTCQ00610 1675 aaKnown RBP30.15■■■□□ 2.42
SUPT4H1-202ENST00000577396 KDM5DQ9BY66 1539 aa30.14■■■□□ 2.42
SUPT4H1-202ENST00000577396 MROH2AA6NES4 1674 aa30.12■■■□□ 2.41
SUPT4H1-202ENST00000577396 ABCC3O15438 1527 aa30.11■■■□□ 2.41
SUPT4H1-202ENST00000577396 PLPPR3Q6T4P5 718 aa30.11■■■□□ 2.41
SUPT4H1-202ENST00000577396 VWDEQ8N2E2 1590 aa30.1■■■□□ 2.41
SUPT4H1-202ENST00000577396 C3P01024 1663 aa30.09■■■□□ 2.41
SUPT4H1-202ENST00000577396 GCC2Q8IWJ2 1684 aa30.09■■■□□ 2.41
SUPT4H1-202ENST00000577396 KANK1Q14678 1352 aa30.08■■■□□ 2.41
SUPT4H1-202ENST00000577396 UNC13BO14795 1591 aa30.05■■■□□ 2.4
SUPT4H1-202ENST00000577396 ZC3H13Q5T200 1668 aaKnown RBP30.05■■■□□ 2.4
SUPT4H1-202ENST00000577396 LMTK2Q8IWU2 1503 aa30.03■■■□□ 2.4
SUPT4H1-202ENST00000577396 CEP152O94986 1710 aa30.02■■■□□ 2.4
SUPT4H1-202ENST00000577396 NUP155O75694 1391 aa30■■■□□ 2.39
SUPT4H1-202ENST00000577396 FBXO31Q5XUX0 539 aaPredicted RBP30■■■□□ 2.39
SUPT4H1-202ENST00000577396 PZPP20742 1482 aa30■■■□□ 2.39
SUPT4H1-202ENST00000577396 ARHGAP31Q2M1Z3 1444 aa29.99■■■□□ 2.39
SUPT4H1-202ENST00000577396 SETD5Q9C0A6 1442 aa29.99■■■□□ 2.39
SUPT4H1-202ENST00000577396 NPATQ14207 1427 aa29.98■■■□□ 2.39
SUPT4H1-202ENST00000577396 SETD1BQ9UPS6 1966 aaKnown RBP29.97■■■□□ 2.39
SUPT4H1-202ENST00000577396 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
SUPT4H1-202ENST00000577396 TRIM26Q12899 539 aaPredicted RBP29.94■■■□□ 2.38
SUPT4H1-202ENST00000577396 IQGAP3Q86VI3 1631 aa29.93■■■□□ 2.38
SUPT4H1-202ENST00000577396 EFCAB6Q5THR3 1501 aa29.9■■■□□ 2.38
SUPT4H1-202ENST00000577396 RAB3GAP2Q9H2M9 1393 aa29.9■■■□□ 2.38
SUPT4H1-202ENST00000577396 TRIM52Q96A61 297 aa29.89■■■□□ 2.38
SUPT4H1-202ENST00000577396 TET3O43151 1660 aa29.88■■■□□ 2.37
SUPT4H1-202ENST00000577396 HRCP23327 699 aa29.86■■■□□ 2.37
SUPT4H1-202ENST00000577396 ERVK-7P63135 1459 aa29.86■■■□□ 2.37
SUPT4H1-202ENST00000577396 SPATA31D1Q6ZQQ2 1576 aa29.86■■■□□ 2.37
SUPT4H1-202ENST00000577396 TNRQ92752 1358 aa29.86■■■□□ 2.37
SUPT4H1-202ENST00000577396 CFAP65Q6ZU64 1925 aaKnown RBP29.86■■■□□ 2.37
SUPT4H1-202ENST00000577396 LMTK3Q96Q04 1460 aa29.85■■■□□ 2.37
SUPT4H1-202ENST00000577396 RPRD2Q5VT52 1461 aaKnown RBP29.84■■■□□ 2.37
SUPT4H1-202ENST00000577396 ACIN1Q9UKV3 1341 aaKnown RBP29.84■■■□□ 2.37
SUPT4H1-202ENST00000577396 UHRF1BP1Q6BDS2 1440 aa29.82■■■□□ 2.36
SUPT4H1-202ENST00000577396 PREX1Q8TCU6 1659 aa29.82■■■□□ 2.36
SUPT4H1-202ENST00000577396 NOS1P29475 1434 aa29.81■■■□□ 2.36
SUPT4H1-202ENST00000577396 E9PCH4 1651 aa29.79■■■□□ 2.36
SUPT4H1-202ENST00000577396 SLC4A1APQ9BWU0 796 aaKnown RBP29.78■■■□□ 2.36
SUPT4H1-202ENST00000577396 MPHOSPH9Q99550 1183 aa29.76■■■□□ 2.35
SUPT4H1-202ENST00000577396 PKD2Q13563 968 aa29.75■■■□□ 2.35
SUPT4H1-202ENST00000577396 MYO3AQ8NEV4 1616 aa29.75■■■□□ 2.35
SUPT4H1-202ENST00000577396 NLRP1Q9C000 1473 aa29.74■■■□□ 2.35
SUPT4H1-202ENST00000577396 HSPA2P54652 639 aa29.74■■■□□ 2.35
SUPT4H1-202ENST00000577396 SYNMO15061 1565 aa29.72■■■□□ 2.35
SUPT4H1-202ENST00000577396 IDI1Q13907 227 aa29.71■■■□□ 2.35
SUPT4H1-202ENST00000577396 A2ML1A8K2U0 1454 aa29.71■■■□□ 2.35
SUPT4H1-202ENST00000577396 CEP170BQ9Y4F5 1589 aaPredicted RBP29.7■■■□□ 2.35
SUPT4H1-202ENST00000577396 SLC52A1Q9NWF4 448 aa29.7■■■□□ 2.34
SUPT4H1-202ENST00000577396 PTPRTO14522 1441 aa29.7■■■□□ 2.34
SUPT4H1-202ENST00000577396 ZNF142P52746 1687 aaPredicted RBP29.68■■■□□ 2.34
SUPT4H1-202ENST00000577396 FOXD1Q16676 465 aa29.65■■■□□ 2.34
SUPT4H1-202ENST00000577396 PLA2R1Q13018 1463 aa29.65■■■□□ 2.34
SUPT4H1-202ENST00000577396 THEMISQ8N1K5 641 aaPredicted RBP29.61■■■□□ 2.33
SUPT4H1-202ENST00000577396 UGGT1Q9NYU2 1555 aa29.61■■■□□ 2.33
SUPT4H1-202ENST00000577396 PIK3C2BO00750 1634 aa29.59■■■□□ 2.33
SUPT4H1-202ENST00000577396 SPHKAPQ2M3C7 1700 aa29.58■■■□□ 2.33
SUPT4H1-202ENST00000577396 TRPM2O94759 1503 aa29.56■■■□□ 2.32
SUPT4H1-202ENST00000577396 UBR1Q8IWV7 1749 aa29.55■■■□□ 2.32
SUPT4H1-202ENST00000577396 PCGF6Q9BYE7 350 aa29.55■■■□□ 2.32
SUPT4H1-202ENST00000577396 STAG3Q9UJ98 1225 aa29.53■■■□□ 2.32
SUPT4H1-202ENST00000577396 KDM5AP29375 1690 aaKnown RBP29.52■■■□□ 2.32
SUPT4H1-202ENST00000577396 STRCQ7RTU9 1775 aa29.5■■■□□ 2.31
SUPT4H1-202ENST00000577396 ADGRB3O60242 1522 aa29.49■■■□□ 2.31
SUPT4H1-202ENST00000577396 NCKAP5LQ9HCH0 1330 aa29.48■■■□□ 2.31
SUPT4H1-202ENST00000577396 TMEM131LA2VDJ0 1609 aa29.48■■■□□ 2.31
SUPT4H1-202ENST00000577396 CLTCL1P53675 1640 aa29.48■■■□□ 2.31
SUPT4H1-202ENST00000577396 ARHGAP23Q9P227 1491 aa29.47■■■□□ 2.31
SUPT4H1-202ENST00000577396 TMEM2Q9UHN6 1383 aa29.47■■■□□ 2.31
SUPT4H1-202ENST00000577396 ANKRD30BQ9BXX2 1392 aa29.46■■■□□ 2.31
SUPT4H1-202ENST00000577396 CHGAP10645 457 aaKnown RBP29.45■■■□□ 2.31
SUPT4H1-202ENST00000577396 ANKLE2Q86XL3 938 aa29.45■■■□□ 2.31
SUPT4H1-202ENST00000577396 SLIT1O75093 1534 aa29.45■■■□□ 2.31
SUPT4H1-202ENST00000577396 LTKP29376 864 aa29.43■■■□□ 2.3
SUPT4H1-202ENST00000577396 CCDC144AA2RUR9 1427 aa29.41■■■□□ 2.3
SUPT4H1-202ENST00000577396 MYO5BQ9ULV0 1848 aa29.41■■■□□ 2.3
SUPT4H1-202ENST00000577396 TXNDC2Q86VQ3 553 aa29.41■■■□□ 2.3
SUPT4H1-202ENST00000577396 DMRT2Q9Y5R5 561 aa29.4■■■□□ 2.3
SUPT4H1-202ENST00000577396 ZFYVE9O95405 1425 aa29.37■■■□□ 2.29
SUPT4H1-202ENST00000577396 EID1Q9Y6B2 187 aa29.37■■■□□ 2.29
SUPT4H1-202ENST00000577396 DHX57Q6P158 1386 aaKnown RBP29.36■■■□□ 2.29
SUPT4H1-202ENST00000577396 MED14O60244 1454 aa29.36■■■□□ 2.29
SUPT4H1-202ENST00000577396 NEURL4Q96JN8 1562 aa29.36■■■□□ 2.29
SUPT4H1-202ENST00000577396 SCAF11Q99590 1463 aaKnown RBP29.35■■■□□ 2.29
SUPT4H1-202ENST00000577396 RIMS2Q9UQ26 1411 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms