RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 CHIC2Q9UKJ5 165 aa40.7■■■■■ 4.11
PPP4R1-204ENST00000577393 DUOX2Q9NRD8 1548 aa40.69■■■■■ 4.1
PPP4R1-204ENST00000577393 UHRF1BP1Q6BDS2 1440 aa40.67■■■■■ 4.1
PPP4R1-204ENST00000577393 NPATQ14207 1427 aa40.65■■■■■ 4.1
PPP4R1-204ENST00000577393 WASHC2CQ9Y4E1 1318 aa40.64■■■■■ 4.1
PPP4R1-204ENST00000577393 EIF2AK4Q9P2K8 1649 aaKnown RBP40.64■■■■■ 4.1
PPP4R1-204ENST00000577393 ANKRD30AQ9BXX3 1397 aa40.62■■■■■ 4.09
PPP4R1-204ENST00000577393 KDM5DQ9BY66 1539 aa40.62■■■■■ 4.09
PPP4R1-204ENST00000577393 RNF17Q9BXT8 1623 aaKnown RBP40.61■■■■■ 4.09
PPP4R1-204ENST00000577393 FAM135AQ9P2D6 1515 aa40.61■■■■■ 4.09
PPP4R1-204ENST00000577393 PTPRKQ15262 1439 aa40.6■■■■■ 4.09
PPP4R1-204ENST00000577393 NCOA1Q15788 1441 aa40.58■■■■■ 4.09
PPP4R1-204ENST00000577393 ERBINQ96RT1 1412 aa40.57■■■■■ 4.08
PPP4R1-204ENST00000577393 ADGRL2O95490 1459 aa40.53■■■■■ 4.08
PPP4R1-204ENST00000577393 MROH1Q8NDA8 1641 aa40.51■■■■■ 4.08
PPP4R1-204ENST00000577393 ABCC3O15438 1527 aa40.47■■■■■ 4.07
PPP4R1-204ENST00000577393 FBXO31Q5XUX0 539 aaPredicted RBP40.47■■■■■ 4.07
PPP4R1-204ENST00000577393 PZPP20742 1482 aa40.46■■■■■ 4.07
PPP4R1-204ENST00000577393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.44■■■■■ 4.061e-18■■■■□ 20.3
PPP4R1-204ENST00000577393 ZC3H13Q5T200 1668 aaKnown RBP40.42■■■■■ 4.06
PPP4R1-204ENST00000577393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.4■■■■■ 4.063e-6■■■□□ 16
PPP4R1-204ENST00000577393 MYO3AQ8NEV4 1616 aa40.4■■■■■ 4.06
PPP4R1-204ENST00000577393 PRDM15P57071 1507 aaPredicted RBP40.39■■■■■ 4.06
PPP4R1-204ENST00000577393 TNRQ92752 1358 aa40.37■■■■■ 4.05
PPP4R1-204ENST00000577393 ITGAEP38570 1179 aa40.37■■■■■ 4.05
PPP4R1-204ENST00000577393 DEPDC5O75140 1603 aa40.36■■■■■ 4.05
PPP4R1-204ENST00000577393 CEP152O94986 1710 aa40.36■■■■■ 4.05
PPP4R1-204ENST00000577393 RRBP1Q9P2E9 1410 aaKnown RBP40.33■■■■■ 4.05
PPP4R1-204ENST00000577393 ANKRD50Q9ULJ7 1429 aa40.33■■■■■ 4.05
PPP4R1-204ENST00000577393 ROCK1Q13464 1354 aa40.33■■■■■ 4.05
PPP4R1-204ENST00000577393 STRCQ7RTU9 1775 aa40.33■■■■■ 4.05
PPP4R1-204ENST00000577393 CEP170BQ9Y4F5 1589 aaPredicted RBP40.32■■■■■ 4.05
PPP4R1-204ENST00000577393 KANK1Q14678 1352 aa40.32■■■■■ 4.04
PPP4R1-204ENST00000577393 ZNF142P52746 1687 aaPredicted RBP40.31■■■■■ 4.04
PPP4R1-204ENST00000577393 CAMSAP1Q5T5Y3 1602 aa40.3■■■■■ 4.04
PPP4R1-204ENST00000577393 A2ML1A8K2U0 1454 aa40.27■■■■■ 4.04
PPP4R1-204ENST00000577393 DMRT2Q9Y5R5 561 aa40.24■■■■■ 4.03
PPP4R1-204ENST00000577393 VWDEQ8N2E2 1590 aa40.23■■■■■ 4.03
PPP4R1-204ENST00000577393 ERVK-7P63135 1459 aa40.22■■■■■ 4.03
PPP4R1-204ENST00000577393 ARHGAP31Q2M1Z3 1444 aa40.22■■■■■ 4.03
PPP4R1-204ENST00000577393 SPATA31D1Q6ZQQ2 1576 aa40.22■■■■■ 4.03
PPP4R1-204ENST00000577393 CFAP65Q6ZU64 1925 aaKnown RBP40.19■■■■■ 4.02
PPP4R1-204ENST00000577393 NLRP1Q9C000 1473 aa40.19■■■■■ 4.02
PPP4R1-204ENST00000577393 LMTK2Q8IWU2 1503 aa40.18■■■■■ 4.02
PPP4R1-204ENST00000577393 PLA2R1Q13018 1463 aa40.15■■■■■ 4.02
PPP4R1-204ENST00000577393 NCKAP5LQ9HCH0 1330 aa40.15■■■■■ 4.02
PPP4R1-204ENST00000577393 PTPRTO14522 1441 aa40.14■■■■■ 4.02
PPP4R1-204ENST00000577393 PKD2Q13563 968 aa40.09■■■■■ 4.01
PPP4R1-204ENST00000577393 UGGT1Q9NYU2 1555 aa40.06■■■■■ 4
PPP4R1-204ENST00000577393 THEMISQ8N1K5 641 aaPredicted RBP40.06■■■■■ 4
PPP4R1-204ENST00000577393 UNC13BO14795 1591 aa40.06■■■■■ 4
PPP4R1-204ENST00000577393 EFCAB6Q5THR3 1501 aa40.04■■■■■ 4
PPP4R1-204ENST00000577393 TET3O43151 1660 aa39.96■■■■□ 3.99
PPP4R1-204ENST00000577393 NOS1P29475 1434 aa39.94■■■■□ 3.98
PPP4R1-204ENST00000577393 ANKLE2Q86XL3 938 aa39.94■■■■□ 3.98
PPP4R1-204ENST00000577393 NUP155O75694 1391 aa39.94■■■■□ 3.98
PPP4R1-204ENST00000577393 ILDR1Q86SU0 546 aaPredicted RBP39.93■■■■□ 3.98
PPP4R1-204ENST00000577393 RPRD2Q5VT52 1461 aaKnown RBP39.93■■■■□ 3.98
PPP4R1-204ENST00000577393 NAIPQ13075 1403 aa39.92■■■■□ 3.98
PPP4R1-204ENST00000577393 IQGAP3Q86VI3 1631 aa39.9■■■■□ 3.98
PPP4R1-204ENST00000577393 SYNMO15061 1565 aa39.89■■■■□ 3.98
PPP4R1-204ENST00000577393 UBR1Q8IWV7 1749 aa39.89■■■■□ 3.98
PPP4R1-204ENST00000577393 CERKQ8TCT0 537 aa39.89■■■■□ 3.98
PPP4R1-204ENST00000577393 IDI1Q13907 227 aa39.88■■■■□ 3.97
PPP4R1-204ENST00000577393 GCC2Q8IWJ2 1684 aa39.88■■■■□ 3.97
PPP4R1-204ENST00000577393 POLR1AO95602 1720 aaPredicted RBP39.88■■■■□ 3.97
PPP4R1-204ENST00000577393 NEURL4Q96JN8 1562 aa39.86■■■■□ 3.97
PPP4R1-204ENST00000577393 PIK3C2BO00750 1634 aa39.85■■■■□ 3.97
PPP4R1-204ENST00000577393 HFM1A2PYH4 1435 aa39.83■■■■□ 3.97
PPP4R1-204ENST00000577393 SLC52A1Q9NWF4 448 aa39.82■■■■□ 3.97
PPP4R1-204ENST00000577393 STAG3Q9UJ98 1225 aa39.82■■■■□ 3.97
PPP4R1-204ENST00000577393 E9PCH4 1651 aa39.8■■■■□ 3.96
PPP4R1-204ENST00000577393 FBXO41Q8TF61 875 aa39.79■■■■□ 3.96
PPP4R1-204ENST00000577393 LTBP4Q8N2S1 1624 aa39.77■■■■□ 3.96
PPP4R1-204ENST00000577393 MED14O60244 1454 aa39.77■■■■□ 3.96
PPP4R1-204ENST00000577393 ZNF335Q9H4Z2 1342 aaPredicted RBP39.77■■■■□ 3.96
PPP4R1-204ENST00000577393 NPHP4O75161 1426 aaPredicted RBP39.76■■■■□ 3.96
PPP4R1-204ENST00000577393 ARHGAP23Q9P227 1491 aa39.75■■■■□ 3.95
PPP4R1-204ENST00000577393 SLIT1O75093 1534 aa39.75■■■■□ 3.95
PPP4R1-204ENST00000577393 LTKP29376 864 aa39.72■■■■□ 3.95
PPP4R1-204ENST00000577393 TXNDC2Q86VQ3 553 aa39.72■■■■□ 3.95
PPP4R1-204ENST00000577393 KDM5AP29375 1690 aaKnown RBP39.72■■■■□ 3.95
PPP4R1-204ENST00000577393 TMEM2Q9UHN6 1383 aa39.72■■■■□ 3.95
PPP4R1-204ENST00000577393 SCAF11Q99590 1463 aaKnown RBP39.69■■■■□ 3.94
PPP4R1-204ENST00000577393 ADGRB3O60242 1522 aa39.69■■■■□ 3.94
PPP4R1-204ENST00000577393 EID1Q9Y6B2 187 aa39.68■■■■□ 3.94
PPP4R1-204ENST00000577393 TRIM52Q96A61 297 aa39.66■■■■□ 3.94
PPP4R1-204ENST00000577393 IQGAP1P46940 1657 aa39.66■■■■□ 3.94
PPP4R1-204ENST00000577393 CHGAP10645 457 aaKnown RBP39.57■■■■□ 3.93
PPP4R1-204ENST00000577393 TMEM131LA2VDJ0 1609 aa39.56■■■■□ 3.92
PPP4R1-204ENST00000577393 MYO5BQ9ULV0 1848 aa39.54■■■■□ 3.92
PPP4R1-204ENST00000577393 IQSEC2Q5JU85 1478 aa39.52■■■■□ 3.92
PPP4R1-204ENST00000577393 SPHKAPQ2M3C7 1700 aa39.51■■■■□ 3.92
PPP4R1-204ENST00000577393 SLC4A1APQ9BWU0 796 aaKnown RBP39.51■■■■□ 3.92
PPP4R1-204ENST00000577393 ZFYVE9O95405 1425 aa39.48■■■■□ 3.91
PPP4R1-204ENST00000577393 RIMS2Q9UQ26 1411 aa39.47■■■■□ 3.91
PPP4R1-204ENST00000577393 CPS1P31327 1500 aa39.46■■■■□ 3.91
PPP4R1-204ENST00000577393 HDGFP51858 240 aaKnown RBP39.44■■■■□ 3.9
PPP4R1-204ENST00000577393 SETD5Q9C0A6 1442 aa39.43■■■■□ 3.9
PPP4R1-204ENST00000577393 TRPM2O94759 1503 aa39.4■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms