RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 ZC3H13Q5T200 1668 aaKnown RBP10.43□□□□□ -0.74
SNX11-204ENST00000577310 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
SNX11-204ENST00000577310 SPATA31A6Q5VVP1 1343 aa10.42□□□□□ -0.74
SNX11-204ENST00000577310 TNRQ92752 1358 aa10.41□□□□□ -0.74
SNX11-204ENST00000577310 MEX3CQ5U5Q3 659 aaKnown RBP10.41□□□□□ -0.74
SNX11-204ENST00000577310 FAM135AQ9P2D6 1515 aa10.41□□□□□ -0.74
SNX11-204ENST00000577310 LRP5O75197 1615 aa10.4□□□□□ -0.74
SNX11-204ENST00000577310 PLXNC1O60486 1568 aa10.4□□□□□ -0.74
SNX11-204ENST00000577310 UGGT1Q9NYU2 1555 aa10.4□□□□□ -0.74
SNX11-204ENST00000577310 LRRC9Q6ZRR7 1453 aa10.4□□□□□ -0.74
SNX11-204ENST00000577310 LRP6O75581 1613 aa10.4□□□□□ -0.75
SNX11-204ENST00000577310 KIF14Q15058 1648 aa10.4□□□□□ -0.75
SNX11-204ENST00000577310 GGT6Q6P531 493 aa10.39□□□□□ -0.75
SNX11-204ENST00000577310 NLRP1Q9C000 1473 aa10.38□□□□□ -0.75
SNX11-204ENST00000577310 FGD6Q6ZV73 1430 aa10.37□□□□□ -0.75
SNX11-204ENST00000577310 SAMD9LQ8IVG5 1584 aa10.37□□□□□ -0.75
SNX11-204ENST00000577310 CDK11AQ9UQ88 783 aaPredicted RBP10.37□□□□□ -0.75
SNX11-204ENST00000577310 ATAD2Q6PL18 1390 aa10.37□□□□□ -0.75
SNX11-204ENST00000577310 COL16A1Q07092 1604 aaPredicted RBP10.36□□□□□ -0.75
SNX11-204ENST00000577310 SHPRHQ149N8 1683 aa10.36□□□□□ -0.75
SNX11-204ENST00000577310 ATP7AQ04656 1500 aa10.36□□□□□ -0.75
SNX11-204ENST00000577310 PREX2Q70Z35 1606 aa10.36□□□□□ -0.75
SNX11-204ENST00000577310 A2MP01023 1474 aa10.36□□□□□ -0.75
SNX11-204ENST00000577310 RGS12O14924 1447 aa10.35□□□□□ -0.75
SNX11-204ENST00000577310 NUTM2BA6NNL0 878 aaPredicted RBP10.35□□□□□ -0.75
SNX11-204ENST00000577310 NUTM2EB1AL46 878 aaPredicted RBP10.35□□□□□ -0.75
SNX11-204ENST00000577310 NUTM2DQ5VT03 806 aaPredicted RBP10.35□□□□□ -0.75
SNX11-204ENST00000577310 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
SNX11-204ENST00000577310 NUTM2AQ8IVF1 878 aaPredicted RBP10.35□□□□□ -0.75
SNX11-204ENST00000577310 PZPP20742 1482 aa10.35□□□□□ -0.75
SNX11-204ENST00000577310 RBM6P78332 1123 aaKnown RBP10.34□□□□□ -0.75
SNX11-204ENST00000577310 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
SNX11-204ENST00000577310 SPAG9O60271 1321 aaKnown RBP10.33□□□□□ -0.76
SNX11-204ENST00000577310 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
SNX11-204ENST00000577310 ADGBQ8N7X0 1667 aa10.32□□□□□ -0.76
SNX11-204ENST00000577310 TMEM94Q12767 1356 aa10.32□□□□□ -0.76
SNX11-204ENST00000577310 TROQ12816 1431 aaPredicted RBP10.32□□□□□ -0.76
SNX11-204ENST00000577310 SLAIN2Q9P270 581 aa10.31□□□□□ -0.76
SNX11-204ENST00000577310 CLIP1P30622 1438 aa10.31□□□□□ -0.76
SNX11-204ENST00000577310 AFF2P51816 1311 aa10.31□□□□□ -0.76
SNX11-204ENST00000577310 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
SNX11-204ENST00000577310 INO80Q9ULG1 1556 aaPredicted RBP10.3□□□□□ -0.76
SNX11-204ENST00000577310 YY1P25490 414 aa10.29□□□□□ -0.76
SNX11-204ENST00000577310 QTRT2Q9H974 415 aaKnown RBP10.29□□□□□ -0.76
SNX11-204ENST00000577310 CDC42BPAQ5VT25 1732 aa10.29□□□□□ -0.76
SNX11-204ENST00000577310 CEP350Q5VT06 3117 aa10.28□□□□□ -0.76
SNX11-204ENST00000577310 NGLY1Q96IV0 654 aa10.28□□□□□ -0.76
SNX11-204ENST00000577310 SCAF11Q99590 1463 aaKnown RBP10.28□□□□□ -0.76
SNX11-204ENST00000577310 ABCC3O15438 1527 aa10.27□□□□□ -0.77
SNX11-204ENST00000577310 UBR1Q8IWV7 1749 aa10.27□□□□□ -0.77
SNX11-204ENST00000577310 NHSL1Q5SYE7 1610 aa10.26□□□□□ -0.77
SNX11-204ENST00000577310 TIAM1Q13009 1591 aa10.26□□□□□ -0.77
SNX11-204ENST00000577310 NWD1Q149M9 1564 aa10.26□□□□□ -0.77
SNX11-204ENST00000577310 MSH6P52701 1360 aa10.26□□□□□ -0.77
SNX11-204ENST00000577310 KCNA6P17658 529 aa10.25□□□□□ -0.77
SNX11-204ENST00000577310 RANGAP1P46060 587 aaPredicted RBP10.25□□□□□ -0.77
SNX11-204ENST00000577310 PROSER2Q86WR7 435 aaPredicted RBP10.25□□□□□ -0.77
SNX11-204ENST00000577310 AHDC1Q5TGY3 1603 aaPredicted RBP10.25□□□□□ -0.77
SNX11-204ENST00000577310 PRDM15P57071 1507 aaPredicted RBP10.24□□□□□ -0.77
SNX11-204ENST00000577310 SYCP2Q9BX26 1530 aa10.24□□□□□ -0.77
SNX11-204ENST00000577310 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
SNX11-204ENST00000577310 CFAP65Q6ZU64 1925 aaKnown RBP10.23□□□□□ -0.77
SNX11-204ENST00000577310 ARHGAP23Q9P227 1491 aa10.23□□□□□ -0.77
SNX11-204ENST00000577310 SLIT1O75093 1534 aa10.23□□□□□ -0.77
SNX11-204ENST00000577310 LTKP29376 864 aa10.22□□□□□ -0.77
SNX11-204ENST00000577310 HNRNPMP52272 730 aaKnown RBP eCLIP10.22□□□□□ -0.77
SNX11-204ENST00000577310 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
SNX11-204ENST00000577310 WASHC2CQ9Y4E1 1318 aa10.22□□□□□ -0.77
SNX11-204ENST00000577310 KIAA1107Q9UPP5 1409 aa10.22□□□□□ -0.77
SNX11-204ENST00000577310 DIP2AQ14689 1571 aa10.22□□□□□ -0.77
SNX11-204ENST00000577310 KDM5AP29375 1690 aaKnown RBP10.22□□□□□ -0.77
SNX11-204ENST00000577310 NKTRP30414 1462 aaKnown RBP10.21□□□□□ -0.78
SNX11-204ENST00000577310 LRRIQ1Q96JM4 1722 aa10.21□□□□□ -0.78
SNX11-204ENST00000577310 EID1Q9Y6B2 187 aa10.2□□□□□ -0.78
SNX11-204ENST00000577310 PLEKHH2Q8IVE3 1493 aa10.19□□□□□ -0.78
SNX11-204ENST00000577310 FMN1Q68DA7 1419 aa10.19□□□□□ -0.78
SNX11-204ENST00000577310 DHX29Q7Z478 1369 aaKnown RBP10.19□□□□□ -0.78
SNX11-204ENST00000577310 ZNF777Q9ULD5 760 aaPredicted RBP10.19□□□□□ -0.78
SNX11-204ENST00000577310 NCOA2Q15596 1464 aa10.18□□□□□ -0.78
SNX11-204ENST00000577310 SENP3-EIF4A1A0A087X0R7 540 aa10.18□□□□□ -0.78
SNX11-204ENST00000577310 C8orf37Q96NL8 207 aa10.18□□□□□ -0.78
SNX11-204ENST00000577310 KIF3BO15066 747 aa10.17□□□□□ -0.78
SNX11-204ENST00000577310 HRCP23327 699 aa10.17□□□□□ -0.78
SNX11-204ENST00000577310 BLMP54132 1417 aaPredicted RBP10.16□□□□□ -0.78
SNX11-204ENST00000577310 UTRNP46939 3433 aa10.16□□□□□ -0.78
SNX11-204ENST00000577310 RTEL1-TNFRSF6BF6WH68 1400 aa10.16□□□□□ -0.78
SNX11-204ENST00000577310 TET3O43151 1660 aa10.15□□□□□ -0.78
SNX11-204ENST00000577310 CHD2O14647 1828 aaKnown RBP10.15□□□□□ -0.78
SNX11-204ENST00000577310 TRPC5Q9UL62 973 aaPredicted RBP10.15□□□□□ -0.78
SNX11-204ENST00000577310 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
SNX11-204ENST00000577310 ERVK-7P63135 1459 aa10.14□□□□□ -0.79
SNX11-204ENST00000577310 BCL9LQ86UU0 1499 aa10.14□□□□□ -0.79
SNX11-204ENST00000577310 SETD5Q9C0A6 1442 aa10.14□□□□□ -0.79
SNX11-204ENST00000577310 NCOA3Q9Y6Q9 1424 aa10.14□□□□□ -0.79
SNX11-204ENST00000577310 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.13□□□□□ -0.79
SNX11-204ENST00000577310 GPATCH8Q9UKJ3 1502 aaKnown RBP10.12□□□□□ -0.79
SNX11-204ENST00000577310 DEFB132Q7Z7B7 95 aa10.12□□□□□ -0.79
SNX11-204ENST00000577310 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
SNX11-204ENST00000577310 MROH1Q8NDA8 1641 aa10.11□□□□□ -0.79
SNX11-204ENST00000577310 CAMSAP2Q08AD1 1489 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms