RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 KIF15Q9NS87 1388 aa23.55■■□□□ 1.36
POLR2A-208ENST00000576952 RRP7BPQ9NSQ0 103 aa23.55■■□□□ 1.36
POLR2A-208ENST00000576952 CEP152O94986 1710 aa23.55■■□□□ 1.36
POLR2A-208ENST00000576952 CFAP65Q6ZU64 1925 aaKnown RBP23.54■■□□□ 1.36
POLR2A-208ENST00000576952 MROH1Q8NDA8 1641 aa23.54■■□□□ 1.36
POLR2A-208ENST00000576952 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
POLR2A-208ENST00000576952 KDM5DQ9BY66 1539 aa23.53■■□□□ 1.36
POLR2A-208ENST00000576952 ANKRD30AQ9BXX3 1397 aa23.51■■□□□ 1.35
POLR2A-208ENST00000576952 ZC3H13Q5T200 1668 aaKnown RBP23.51■■□□□ 1.35
POLR2A-208ENST00000576952 NCOA1Q15788 1441 aa23.5■■□□□ 1.35
POLR2A-208ENST00000576952 ADGRL2O95490 1459 aa23.5■■□□□ 1.35
POLR2A-208ENST00000576952 FAM135AQ9P2D6 1515 aa23.5■■□□□ 1.35
POLR2A-208ENST00000576952 HSPA2P54652 639 aa23.49■■□□□ 1.35
POLR2A-208ENST00000576952 PTPRKQ15262 1439 aa23.49■■□□□ 1.35
POLR2A-208ENST00000576952 ERBINQ96RT1 1412 aa23.49■■□□□ 1.35
POLR2A-208ENST00000576952 DEPDC5O75140 1603 aa23.48■■□□□ 1.35
POLR2A-208ENST00000576952 UHRF1BP1Q6BDS2 1440 aa23.47■■□□□ 1.35
POLR2A-208ENST00000576952 NPATQ14207 1427 aa23.46■■□□□ 1.35
POLR2A-208ENST00000576952 WASHC2CQ9Y4E1 1318 aa23.46■■□□□ 1.35
POLR2A-208ENST00000576952 MYO3AQ8NEV4 1616 aa23.45■■□□□ 1.34
POLR2A-208ENST00000576952 ABCC3O15438 1527 aa23.45■■□□□ 1.34
POLR2A-208ENST00000576952 CAMSAP1Q5T5Y3 1602 aa23.44■■□□□ 1.34
POLR2A-208ENST00000576952 PRDM15P57071 1507 aaPredicted RBP23.44■■□□□ 1.34
POLR2A-208ENST00000576952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.42■■□□□ 1.34
POLR2A-208ENST00000576952 ITGAEP38570 1179 aa23.42■■□□□ 1.34
POLR2A-208ENST00000576952 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
POLR2A-208ENST00000576952 ZNF142P52746 1687 aaPredicted RBP23.41■■□□□ 1.34
POLR2A-208ENST00000576952 STRCQ7RTU9 1775 aa23.41■■□□□ 1.34
POLR2A-208ENST00000576952 PZPP20742 1482 aa23.41■■□□□ 1.34
POLR2A-208ENST00000576952 FBXO31Q5XUX0 539 aaPredicted RBP23.38■■□□□ 1.33
POLR2A-208ENST00000576952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.37■■□□□ 1.333e-7■■□□□ 13.1
POLR2A-208ENST00000576952 CEP170BQ9Y4F5 1589 aaPredicted RBP23.36■■□□□ 1.33
POLR2A-208ENST00000576952 ANKRD50Q9ULJ7 1429 aa23.36■■□□□ 1.33
POLR2A-208ENST00000576952 ROCK1Q13464 1354 aa23.35■■□□□ 1.33
POLR2A-208ENST00000576952 VWDEQ8N2E2 1590 aa23.34■■□□□ 1.33
POLR2A-208ENST00000576952 TNRQ92752 1358 aa23.31■■□□□ 1.32
POLR2A-208ENST00000576952 UNC13BO14795 1591 aa23.31■■□□□ 1.32
POLR2A-208ENST00000576952 SPATA31D1Q6ZQQ2 1576 aa23.31■■□□□ 1.32
POLR2A-208ENST00000576952 KANK1Q14678 1352 aa23.3■■□□□ 1.32
POLR2A-208ENST00000576952 A2ML1A8K2U0 1454 aa23.28■■□□□ 1.32
POLR2A-208ENST00000576952 ERVK-7P63135 1459 aa23.28■■□□□ 1.32
POLR2A-208ENST00000576952 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
POLR2A-208ENST00000576952 GCC2Q8IWJ2 1684 aa23.27■■□□□ 1.32
POLR2A-208ENST00000576952 ARHGAP31Q2M1Z3 1444 aa23.25■■□□□ 1.31
POLR2A-208ENST00000576952 TET3O43151 1660 aa23.25■■□□□ 1.31
POLR2A-208ENST00000576952 EFCAB6Q5THR3 1501 aa23.24■■□□□ 1.31
POLR2A-208ENST00000576952 POLR1AO95602 1720 aaPredicted RBP23.22■■□□□ 1.31
POLR2A-208ENST00000576952 NLRP1Q9C000 1473 aa23.22■■□□□ 1.31
POLR2A-208ENST00000576952 IQGAP3Q86VI3 1631 aa23.22■■□□□ 1.31
POLR2A-208ENST00000576952 UBR1Q8IWV7 1749 aa23.2■■□□□ 1.3
POLR2A-208ENST00000576952 UGGT1Q9NYU2 1555 aa23.19■■□□□ 1.3
POLR2A-208ENST00000576952 E9PCH4 1651 aa23.19■■□□□ 1.3
POLR2A-208ENST00000576952 PLA2R1Q13018 1463 aa23.18■■□□□ 1.3
POLR2A-208ENST00000576952 NAIPQ13075 1403 aa23.16■■□□□ 1.3
POLR2A-208ENST00000576952 PIK3C2BO00750 1634 aa23.16■■□□□ 1.3
POLR2A-208ENST00000576952 SYNMO15061 1565 aa23.16■■□□□ 1.3
POLR2A-208ENST00000576952 NCKAP5LQ9HCH0 1330 aa23.15■■□□□ 1.3
POLR2A-208ENST00000576952 DMRT2Q9Y5R5 561 aa23.14■■□□□ 1.29
POLR2A-208ENST00000576952 MYO5BQ9ULV0 1848 aa23.14■■□□□ 1.29
POLR2A-208ENST00000576952 PTPRTO14522 1441 aa23.13■■□□□ 1.29
POLR2A-208ENST00000576952 NUP155O75694 1391 aa23.12■■□□□ 1.29
POLR2A-208ENST00000576952 RPRD2Q5VT52 1461 aaKnown RBP23.11■■□□□ 1.29
POLR2A-208ENST00000576952 NEURL4Q96JN8 1562 aa23.1■■□□□ 1.29
POLR2A-208ENST00000576952 HFM1A2PYH4 1435 aa23.1■■□□□ 1.29
POLR2A-208ENST00000576952 NOS1P29475 1434 aa23.1■■□□□ 1.29
POLR2A-208ENST00000576952 THEMISQ8N1K5 641 aaPredicted RBP23.09■■□□□ 1.29
POLR2A-208ENST00000576952 KDM5AP29375 1690 aaKnown RBP23.09■■□□□ 1.29
POLR2A-208ENST00000576952 PKD2Q13563 968 aa23.08■■□□□ 1.29
POLR2A-208ENST00000576952 SPHKAPQ2M3C7 1700 aa23.05■■□□□ 1.28
POLR2A-208ENST00000576952 IDI1Q13907 227 aa23.04■■□□□ 1.28
POLR2A-208ENST00000576952 IQGAP1P46940 1657 aa23.03■■□□□ 1.28
POLR2A-208ENST00000576952 ANKLE2Q86XL3 938 aa23.01■■□□□ 1.27
POLR2A-208ENST00000576952 ADGRB3O60242 1522 aa23.01■■□□□ 1.27
POLR2A-208ENST00000576952 SLIT1O75093 1534 aa23■■□□□ 1.27
POLR2A-208ENST00000576952 ARHGAP23Q9P227 1491 aa22.99■■□□□ 1.27
POLR2A-208ENST00000576952 STAG3Q9UJ98 1225 aa22.99■■□□□ 1.27
POLR2A-208ENST00000576952 TMEM131LA2VDJ0 1609 aa22.98■■□□□ 1.27
POLR2A-208ENST00000576952 LTBP4Q8N2S1 1624 aa22.98■■□□□ 1.27
POLR2A-208ENST00000576952 SLC52A1Q9NWF4 448 aa22.98■■□□□ 1.27
POLR2A-208ENST00000576952 MED14O60244 1454 aa22.98■■□□□ 1.27
POLR2A-208ENST00000576952 TRIM52Q96A61 297 aa22.97■■□□□ 1.27
POLR2A-208ENST00000576952 NPHP4O75161 1426 aaPredicted RBP22.96■■□□□ 1.27
POLR2A-208ENST00000576952 SCAF11Q99590 1463 aaKnown RBP22.95■■□□□ 1.26
POLR2A-208ENST00000576952 CERKQ8TCT0 537 aa22.94■■□□□ 1.26
POLR2A-208ENST00000576952 TMEM2Q9UHN6 1383 aa22.93■■□□□ 1.26
POLR2A-208ENST00000576952 ZNF335Q9H4Z2 1342 aaPredicted RBP22.93■■□□□ 1.26
POLR2A-208ENST00000576952 LTKP29376 864 aa22.93■■□□□ 1.26
POLR2A-208ENST00000576952 TXNDC2Q86VQ3 553 aa22.92■■□□□ 1.26
POLR2A-208ENST00000576952 ILDR1Q86SU0 546 aaPredicted RBP22.91■■□□□ 1.26
POLR2A-208ENST00000576952 KIF1BO60333 1816 aa22.91■■□□□ 1.26
POLR2A-208ENST00000576952 STRCP1A6NGW2 1772 aa22.91■■□□□ 1.26
POLR2A-208ENST00000576952 CLTCL1P53675 1640 aa22.9■■□□□ 1.26
POLR2A-208ENST00000576952 SETD5Q9C0A6 1442 aa22.89■■□□□ 1.25
POLR2A-208ENST00000576952 EID1Q9Y6B2 187 aa22.88■■□□□ 1.25
POLR2A-208ENST00000576952 CHGAP10645 457 aaKnown RBP22.87■■□□□ 1.25
POLR2A-208ENST00000576952 SLC4A1APQ9BWU0 796 aaKnown RBP22.87■■□□□ 1.25
POLR2A-208ENST00000576952 TRPM2O94759 1503 aa22.87■■□□□ 1.25
POLR2A-208ENST00000576952 ZFYVE9O95405 1425 aa22.84■■□□□ 1.25
POLR2A-208ENST00000576952 FBXO41Q8TF61 875 aa22.84■■□□□ 1.25
POLR2A-208ENST00000576952 RIMS2Q9UQ26 1411 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms