RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 CEP162Q5TB80 1403 aa17.2■□□□□ 0.34
CALCOCO2-228ENST00000576582 TNRQ92752 1358 aa17.19■□□□□ 0.34
CALCOCO2-228ENST00000576582 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
CALCOCO2-228ENST00000576582 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
CALCOCO2-228ENST00000576582 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
CALCOCO2-228ENST00000576582 THEMISQ8N1K5 641 aaPredicted RBP17.19■□□□□ 0.34
CALCOCO2-228ENST00000576582 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
CALCOCO2-228ENST00000576582 CPS1P31327 1500 aa17.16■□□□□ 0.34
CALCOCO2-228ENST00000576582 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
CALCOCO2-228ENST00000576582 HSPA1LP34931 641 aa17.16■□□□□ 0.34
CALCOCO2-228ENST00000576582 SHANK2Q9UPX8 1470 aa17.16■□□□□ 0.34
CALCOCO2-228ENST00000576582 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
CALCOCO2-228ENST00000576582 PZPP20742 1482 aa17.15■□□□□ 0.34
CALCOCO2-228ENST00000576582 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
CALCOCO2-228ENST00000576582 MIA2Q96PC5 1412 aa17.14■□□□□ 0.33
CALCOCO2-228ENST00000576582 CCDC141Q6ZP82 1450 aa17.13■□□□□ 0.33
CALCOCO2-228ENST00000576582 TSPY4P0CV99 314 aa17.13■□□□□ 0.33
CALCOCO2-228ENST00000576582 TSPY10P0CW01 314 aa17.13■□□□□ 0.33
CALCOCO2-228ENST00000576582 NLRP1Q9C000 1473 aa17.12■□□□□ 0.33
CALCOCO2-228ENST00000576582 KDM5DQ9BY66 1539 aa17.12■□□□□ 0.33
CALCOCO2-228ENST00000576582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.12■□□□□ 0.33
CALCOCO2-228ENST00000576582 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
CALCOCO2-228ENST00000576582 MED14O60244 1454 aa17.09■□□□□ 0.33
CALCOCO2-228ENST00000576582 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
CALCOCO2-228ENST00000576582 POLR1AO95602 1720 aaPredicted RBP17.09■□□□□ 0.33
CALCOCO2-228ENST00000576582 NPHP4O75161 1426 aaPredicted RBP17.08■□□□□ 0.32
CALCOCO2-228ENST00000576582 UGGT1Q9NYU2 1555 aa17.07■□□□□ 0.32
CALCOCO2-228ENST00000576582 CAMSAP2Q08AD1 1489 aa17.07■□□□□ 0.32
CALCOCO2-228ENST00000576582 ARHGEF5Q12774 1597 aa17.06■□□□□ 0.32
CALCOCO2-228ENST00000576582 DEPDC5O75140 1603 aa17.05■□□□□ 0.32
CALCOCO2-228ENST00000576582 VWDEQ8N2E2 1590 aa17.05■□□□□ 0.32
CALCOCO2-228ENST00000576582 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
CALCOCO2-228ENST00000576582 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
CALCOCO2-228ENST00000576582 LRRC9Q6ZRR7 1453 aa16.98■□□□□ 0.31
CALCOCO2-228ENST00000576582 MAST1Q9Y2H9 1570 aa16.98■□□□□ 0.31
CALCOCO2-228ENST00000576582 IQGAP1P46940 1657 aa16.97■□□□□ 0.31
CALCOCO2-228ENST00000576582 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
CALCOCO2-228ENST00000576582 ABCC3O15438 1527 aa16.97■□□□□ 0.31
CALCOCO2-228ENST00000576582 LRRC7Q96NW7 1537 aa16.97■□□□□ 0.31
CALCOCO2-228ENST00000576582 RNF17Q9BXT8 1623 aaKnown RBP16.97■□□□□ 0.31
CALCOCO2-228ENST00000576582 ALKQ9UM73 1620 aa16.96■□□□□ 0.31
CALCOCO2-228ENST00000576582 MAP3K1Q13233 1512 aa16.96■□□□□ 0.3
CALCOCO2-228ENST00000576582 ZC3H13Q5T200 1668 aaKnown RBP16.95■□□□□ 0.3
CALCOCO2-228ENST00000576582 ERVK-7P63135 1459 aa16.95■□□□□ 0.3
CALCOCO2-228ENST00000576582 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
CALCOCO2-228ENST00000576582 EIF2AK4Q9P2K8 1649 aaKnown RBP16.93■□□□□ 0.3
CALCOCO2-228ENST00000576582 EID1Q9Y6B2 187 aa16.93■□□□□ 0.3
CALCOCO2-228ENST00000576582 SCAF11Q99590 1463 aaKnown RBP16.92■□□□□ 0.3
CALCOCO2-228ENST00000576582 SYNMO15061 1565 aa16.91■□□□□ 0.3
CALCOCO2-228ENST00000576582 MYOM3Q5VTT5 1437 aa16.91■□□□□ 0.3
CALCOCO2-228ENST00000576582 LTKP29376 864 aa16.91■□□□□ 0.3
CALCOCO2-228ENST00000576582 ARHGAP31Q2M1Z3 1444 aa16.9■□□□□ 0.3
CALCOCO2-228ENST00000576582 MROH1Q8NDA8 1641 aa16.9■□□□□ 0.3
CALCOCO2-228ENST00000576582 STRCP1A6NGW2 1772 aa16.89■□□□□ 0.3
CALCOCO2-228ENST00000576582 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
CALCOCO2-228ENST00000576582 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
CALCOCO2-228ENST00000576582 ARHGAP23Q9P227 1491 aa16.88■□□□□ 0.29
CALCOCO2-228ENST00000576582 SLIT1O75093 1534 aa16.88■□□□□ 0.29
CALCOCO2-228ENST00000576582 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
CALCOCO2-228ENST00000576582 UBR1Q8IWV7 1749 aa16.87■□□□□ 0.29
CALCOCO2-228ENST00000576582 STAG3Q9UJ98 1225 aa16.85■□□□□ 0.29
CALCOCO2-228ENST00000576582 FAM135BQ49AJ0 1406 aa16.85■□□□□ 0.29
CALCOCO2-228ENST00000576582 CFAP65Q6ZU64 1925 aaKnown RBP16.84■□□□□ 0.29
CALCOCO2-228ENST00000576582 RRP7BPQ9NSQ0 103 aa16.84■□□□□ 0.29
CALCOCO2-228ENST00000576582 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
CALCOCO2-228ENST00000576582 KIF15Q9NS87 1388 aa16.84■□□□□ 0.29
CALCOCO2-228ENST00000576582 TMEM2Q9UHN6 1383 aa16.84■□□□□ 0.29
CALCOCO2-228ENST00000576582 ERBINQ96RT1 1412 aa16.84■□□□□ 0.29
CALCOCO2-228ENST00000576582 KCNA6P17658 529 aa16.83■□□□□ 0.28
CALCOCO2-228ENST00000576582 CEP152O94986 1710 aa16.82■□□□□ 0.28
CALCOCO2-228ENST00000576582 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
CALCOCO2-228ENST00000576582 KANK1Q14678 1352 aa16.82■□□□□ 0.28
CALCOCO2-228ENST00000576582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.282e-7■■□□□ 12.9
CALCOCO2-228ENST00000576582 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
CALCOCO2-228ENST00000576582 IDI1Q13907 227 aa16.8■□□□□ 0.28
CALCOCO2-228ENST00000576582 CROCC2H7BZ55 1655 aa16.8■□□□□ 0.28
CALCOCO2-228ENST00000576582 ABCC5O15440 1437 aa16.79■□□□□ 0.28
CALCOCO2-228ENST00000576582 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
CALCOCO2-228ENST00000576582 PROSER2Q86WR7 435 aaPredicted RBP16.78■□□□□ 0.28
CALCOCO2-228ENST00000576582 APLP2Q06481 763 aa16.76■□□□□ 0.27
CALCOCO2-228ENST00000576582 SLC26A8Q96RN1 970 aa16.76■□□□□ 0.27
CALCOCO2-228ENST00000576582 SLC52A1Q9NWF4 448 aa16.76■□□□□ 0.27
CALCOCO2-228ENST00000576582 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
CALCOCO2-228ENST00000576582 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
CALCOCO2-228ENST00000576582 XIRP1Q702N8 1843 aaKnown RBP16.75■□□□□ 0.27
CALCOCO2-228ENST00000576582 PIK3C2BO00750 1634 aa16.75■□□□□ 0.27
CALCOCO2-228ENST00000576582 PTPN23Q9H3S7 1636 aa16.75■□□□□ 0.27
CALCOCO2-228ENST00000576582 ANKRD30AQ9BXX3 1397 aa16.75■□□□□ 0.27
CALCOCO2-228ENST00000576582 DAPK1P53355 1430 aa16.74■□□□□ 0.27
CALCOCO2-228ENST00000576582 LMTK2Q8IWU2 1503 aa16.74■□□□□ 0.27
CALCOCO2-228ENST00000576582 TET3O43151 1660 aa16.72■□□□□ 0.27
CALCOCO2-228ENST00000576582 FGD6Q6ZV73 1430 aa16.72■□□□□ 0.27
CALCOCO2-228ENST00000576582 HDGFP51858 240 aaKnown RBP16.72■□□□□ 0.27
CALCOCO2-228ENST00000576582 POTEAQ6S8J7 498 aa16.72■□□□□ 0.27
CALCOCO2-228ENST00000576582 BCANQ96GW7 911 aa16.71■□□□□ 0.27
CALCOCO2-228ENST00000576582 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
CALCOCO2-228ENST00000576582 NOS1P29475 1434 aa16.7■□□□□ 0.26
CALCOCO2-228ENST00000576582 MSH6P52701 1360 aa16.7■□□□□ 0.26
CALCOCO2-228ENST00000576582 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
CALCOCO2-228ENST00000576582 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms