RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 RNF17Q9BXT8 1623 aaKnown RBP12.74□□□□□ -0.37
PRPF8-213ENST00000576407 DEPDC5O75140 1603 aa12.73□□□□□ -0.37
PRPF8-213ENST00000576407 UNC13BO14795 1591 aa12.73□□□□□ -0.37
PRPF8-213ENST00000576407 MLECQ14165 292 aa12.72□□□□□ -0.37
PRPF8-213ENST00000576407 GGT6Q6P531 493 aa12.72□□□□□ -0.37
PRPF8-213ENST00000576407 MROH1Q8NDA8 1641 aa12.72□□□□□ -0.37
PRPF8-213ENST00000576407 HRCP23327 699 aa12.71□□□□□ -0.37
PRPF8-213ENST00000576407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.376e-9■□□□□ 9.4
PRPF8-213ENST00000576407 PRDM15P57071 1507 aaPredicted RBP12.71□□□□□ -0.38
PRPF8-213ENST00000576407 TRIM52Q96A61 297 aa12.7□□□□□ -0.38
PRPF8-213ENST00000576407 NUP155O75694 1391 aa12.69□□□□□ -0.38
PRPF8-213ENST00000576407 KANK1Q14678 1352 aa12.69□□□□□ -0.38
PRPF8-213ENST00000576407 ACIN1Q9UKV3 1341 aaKnown RBP12.68□□□□□ -0.38
PRPF8-213ENST00000576407 VWDEQ8N2E2 1590 aa12.68□□□□□ -0.38
PRPF8-213ENST00000576407 KDM5DQ9BY66 1539 aa12.67□□□□□ -0.38
PRPF8-213ENST00000576407 IQGAP3Q86VI3 1631 aa12.67□□□□□ -0.38
PRPF8-213ENST00000576407 PPP6R1Q9UPN7 881 aa12.67□□□□□ -0.38
PRPF8-213ENST00000576407 WASHC2CQ9Y4E1 1318 aa12.66□□□□□ -0.38
PRPF8-213ENST00000576407 ABCC3O15438 1527 aa12.66□□□□□ -0.38
PRPF8-213ENST00000576407 FAM135AQ9P2D6 1515 aa12.66□□□□□ -0.38
PRPF8-213ENST00000576407 PZPP20742 1482 aa12.65□□□□□ -0.38
PRPF8-213ENST00000576407 CEP152O94986 1710 aa12.65□□□□□ -0.38
PRPF8-213ENST00000576407 ADAMTSL3P82987 1691 aa12.65□□□□□ -0.38
PRPF8-213ENST00000576407 ZC3H13Q5T200 1668 aaKnown RBP12.65□□□□□ -0.38
PRPF8-213ENST00000576407 CLTCQ00610 1675 aaKnown RBP12.64□□□□□ -0.39
PRPF8-213ENST00000576407 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
PRPF8-213ENST00000576407 ESF1Q9H501 851 aaKnown RBP12.64□□□□□ -0.39
PRPF8-213ENST00000576407 FER1L4A9Z1Z3 1794 aa12.64□□□□□ -0.39
PRPF8-213ENST00000576407 MADDQ8WXG6 1647 aa12.63□□□□□ -0.39
PRPF8-213ENST00000576407 MPHOSPH9Q99550 1183 aa12.63□□□□□ -0.39
PRPF8-213ENST00000576407 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
PRPF8-213ENST00000576407 CAMSAP1Q5T5Y3 1602 aa12.62□□□□□ -0.39
PRPF8-213ENST00000576407 TET3O43151 1660 aa12.62□□□□□ -0.39
PRPF8-213ENST00000576407 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
PRPF8-213ENST00000576407 EFCAB6Q5THR3 1501 aa12.61□□□□□ -0.39
PRPF8-213ENST00000576407 MROH2AA6NES4 1674 aa12.61□□□□□ -0.39
PRPF8-213ENST00000576407 RIMS1Q86UR5 1692 aaKnown RBP12.61□□□□□ -0.39
PRPF8-213ENST00000576407 ZMYM3Q14202 1370 aa12.59□□□□□ -0.39
PRPF8-213ENST00000576407 E9PCH4 1651 aa12.59□□□□□ -0.39
PRPF8-213ENST00000576407 MYT1Q01538 1121 aa12.59□□□□□ -0.39
PRPF8-213ENST00000576407 PKD2Q13563 968 aa12.59□□□□□ -0.39
PRPF8-213ENST00000576407 NPATQ14207 1427 aa12.59□□□□□ -0.39
PRPF8-213ENST00000576407 ARHGAP31Q2M1Z3 1444 aa12.59□□□□□ -0.39
PRPF8-213ENST00000576407 DHX57Q6P158 1386 aaKnown RBP12.58□□□□□ -0.4
PRPF8-213ENST00000576407 KDM4FA0A1W2PPD8 638 aa12.58□□□□□ -0.4
PRPF8-213ENST00000576407 FOXD1Q16676 465 aa12.57□□□□□ -0.4
PRPF8-213ENST00000576407 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
PRPF8-213ENST00000576407 C3P01024 1663 aa12.57□□□□□ -0.4
PRPF8-213ENST00000576407 CEBPAP49715 358 aaPredicted RBP12.56□□□□□ -0.4
PRPF8-213ENST00000576407 PTPRMP28827 1452 aa12.55□□□□□ -0.4
PRPF8-213ENST00000576407 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
PRPF8-213ENST00000576407 PLPPR3Q6T4P5 718 aa12.54□□□□□ -0.4
PRPF8-213ENST00000576407 PREX1Q8TCU6 1659 aa12.54□□□□□ -0.4
PRPF8-213ENST00000576407 ERVK-7P63135 1459 aa12.53□□□□□ -0.4
PRPF8-213ENST00000576407 PTPRTO14522 1441 aa12.53□□□□□ -0.4
PRPF8-213ENST00000576407 NOS1P29475 1434 aa12.53□□□□□ -0.4
PRPF8-213ENST00000576407 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.4
PRPF8-213ENST00000576407 SPATA31D1Q6ZQQ2 1576 aa12.52□□□□□ -0.4
PRPF8-213ENST00000576407 SPHKAPQ2M3C7 1700 aa12.52□□□□□ -0.41
PRPF8-213ENST00000576407 PLA2R1Q13018 1463 aa12.52□□□□□ -0.41
PRPF8-213ENST00000576407 ANKRD30BQ9BXX2 1392 aa12.51□□□□□ -0.41
PRPF8-213ENST00000576407 SYNMO15061 1565 aa12.51□□□□□ -0.41
PRPF8-213ENST00000576407 CCER1Q8TC90 406 aaPredicted RBP12.5□□□□□ -0.41
PRPF8-213ENST00000576407 TRPM2O94759 1503 aa12.5□□□□□ -0.41
PRPF8-213ENST00000576407 TNRQ92752 1358 aa12.49□□□□□ -0.41
PRPF8-213ENST00000576407 UGGT1Q9NYU2 1555 aa12.48□□□□□ -0.41
PRPF8-213ENST00000576407 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
PRPF8-213ENST00000576407 PIK3C2BO00750 1634 aa12.47□□□□□ -0.41
PRPF8-213ENST00000576407 CLTCL1P53675 1640 aa12.47□□□□□ -0.41
PRPF8-213ENST00000576407 CCDC144AA2RUR9 1427 aa12.46□□□□□ -0.41
PRPF8-213ENST00000576407 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
PRPF8-213ENST00000576407 MYO3AQ8NEV4 1616 aa12.45□□□□□ -0.42
PRPF8-213ENST00000576407 CLSPNQ9HAW4 1339 aa12.45□□□□□ -0.42
PRPF8-213ENST00000576407 IDI1Q13907 227 aa12.45□□□□□ -0.42
PRPF8-213ENST00000576407 SIN3AQ96ST3 1273 aa12.45□□□□□ -0.42
PRPF8-213ENST00000576407 NLRP1Q9C000 1473 aa12.45□□□□□ -0.42
PRPF8-213ENST00000576407 SETD1BQ9UPS6 1966 aaKnown RBP12.42□□□□□ -0.42
PRPF8-213ENST00000576407 NEUROD1Q13562 356 aa12.42□□□□□ -0.42
PRPF8-213ENST00000576407 A2ML1A8K2U0 1454 aa12.41□□□□□ -0.42
PRPF8-213ENST00000576407 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
PRPF8-213ENST00000576407 UHRF1BP1Q6BDS2 1440 aa12.41□□□□□ -0.42
PRPF8-213ENST00000576407 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
PRPF8-213ENST00000576407 KIF1BO60333 1816 aa12.41□□□□□ -0.42
PRPF8-213ENST00000576407 ADGRB3O60242 1522 aa12.41□□□□□ -0.42
PRPF8-213ENST00000576407 TMEM131LA2VDJ0 1609 aa12.4□□□□□ -0.42
PRPF8-213ENST00000576407 SPATA31E1Q6ZUB1 1445 aa12.4□□□□□ -0.42
PRPF8-213ENST00000576407 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
PRPF8-213ENST00000576407 ZNF142P52746 1687 aaPredicted RBP12.4□□□□□ -0.42
PRPF8-213ENST00000576407 UBR1Q8IWV7 1749 aa12.4□□□□□ -0.43
PRPF8-213ENST00000576407 KDM5AP29375 1690 aaKnown RBP12.39□□□□□ -0.43
PRPF8-213ENST00000576407 RGL3Q3MIN7 710 aa12.38□□□□□ -0.43
PRPF8-213ENST00000576407 MYO5BQ9ULV0 1848 aa12.38□□□□□ -0.43
PRPF8-213ENST00000576407 NEURL4Q96JN8 1562 aa12.38□□□□□ -0.43
PRPF8-213ENST00000576407 LMTK3Q96Q04 1460 aa12.36□□□□□ -0.43
PRPF8-213ENST00000576407 ZNF326Q5BKZ1 582 aaKnown RBP12.36□□□□□ -0.43
PRPF8-213ENST00000576407 THEMISQ8N1K5 641 aaPredicted RBP12.36□□□□□ -0.43
PRPF8-213ENST00000576407 TONSLQ96HA7 1378 aa12.34□□□□□ -0.43
PRPF8-213ENST00000576407 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
PRPF8-213ENST00000576407 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
PRPF8-213ENST00000576407 SLIT1O75093 1534 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms