RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 DHX57Q6P158 1386 aaKnown RBP24.23■■□□□ 1.47
ERCC4-208ENST00000576348 EIF2AK4Q9P2K8 1649 aaKnown RBP24.21■■□□□ 1.47
ERCC4-208ENST00000576348 GGT6Q6P531 493 aa24.21■■□□□ 1.47
ERCC4-208ENST00000576348 MPHOSPH9Q99550 1183 aa24.21■■□□□ 1.47
ERCC4-208ENST00000576348 ARID4BQ4LE39 1312 aaPredicted RBP24.2■■□□□ 1.46
ERCC4-208ENST00000576348 UNC13BO14795 1591 aa24.17■■□□□ 1.46
ERCC4-208ENST00000576348 REREQ9P2R6 1566 aa24.17■■□□□ 1.46
ERCC4-208ENST00000576348 KDM5DQ9BY66 1539 aa24.15■■□□□ 1.46
ERCC4-208ENST00000576348 AGLP35573 1532 aa24.14■■□□□ 1.45
ERCC4-208ENST00000576348 PZPP20742 1482 aa24.13■■□□□ 1.45
ERCC4-208ENST00000576348 FAM135AQ9P2D6 1515 aa24.12■■□□□ 1.45
ERCC4-208ENST00000576348 PKD2Q13563 968 aa24.12■■□□□ 1.45
ERCC4-208ENST00000576348 MLECQ14165 292 aa24.12■■□□□ 1.45
ERCC4-208ENST00000576348 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
ERCC4-208ENST00000576348 WASHC2CQ9Y4E1 1318 aa24.1■■□□□ 1.45
ERCC4-208ENST00000576348 RNF17Q9BXT8 1623 aaKnown RBP24.1■■□□□ 1.45
ERCC4-208ENST00000576348 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
ERCC4-208ENST00000576348 ESF1Q9H501 851 aaKnown RBP24.09■■□□□ 1.45
ERCC4-208ENST00000576348 DEPDC5O75140 1603 aa24.09■■□□□ 1.45
ERCC4-208ENST00000576348 BCORL1Q5H9F3 1711 aa24.08■■□□□ 1.45
ERCC4-208ENST00000576348 IQGAP3Q86VI3 1631 aa24.06■■□□□ 1.44
ERCC4-208ENST00000576348 FOXD1Q16676 465 aa24.06■■□□□ 1.44
ERCC4-208ENST00000576348 PPP6R1Q9UPN7 881 aa24.06■■□□□ 1.44
ERCC4-208ENST00000576348 MROH1Q8NDA8 1641 aa24.04■■□□□ 1.44
ERCC4-208ENST00000576348 VWDEQ8N2E2 1590 aa24.01■■□□□ 1.43
ERCC4-208ENST00000576348 ZEB1P37275 1124 aaPredicted RBP24■■□□□ 1.43
ERCC4-208ENST00000576348 ABCC3O15438 1527 aa24■■□□□ 1.43
ERCC4-208ENST00000576348 LMTK2Q8IWU2 1503 aa23.99■■□□□ 1.43
ERCC4-208ENST00000576348 NEUROD1Q13562 356 aa23.97■■□□□ 1.43
ERCC4-208ENST00000576348 TET3O43151 1660 aa23.96■■□□□ 1.43
ERCC4-208ENST00000576348 ANKRD30BQ9BXX2 1392 aa23.95■■□□□ 1.42
ERCC4-208ENST00000576348 SIGLEC1Q9BZZ2 1709 aa23.95■■□□□ 1.42
ERCC4-208ENST00000576348 EFCAB6Q5THR3 1501 aa23.94■■□□□ 1.42
ERCC4-208ENST00000576348 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
ERCC4-208ENST00000576348 ZC3H13Q5T200 1668 aaKnown RBP23.92■■□□□ 1.42
ERCC4-208ENST00000576348 CNTLNQ9NXG0 1405 aa23.92■■□□□ 1.42
ERCC4-208ENST00000576348 CEP152O94986 1710 aa23.9■■□□□ 1.42
ERCC4-208ENST00000576348 RPRD2Q5VT52 1461 aaKnown RBP23.89■■□□□ 1.42
ERCC4-208ENST00000576348 NPATQ14207 1427 aa23.88■■□□□ 1.41
ERCC4-208ENST00000576348 CCDC144AA2RUR9 1427 aa23.87■■□□□ 1.41
ERCC4-208ENST00000576348 ARHGAP31Q2M1Z3 1444 aa23.87■■□□□ 1.41
ERCC4-208ENST00000576348 CAMSAP1Q5T5Y3 1602 aa23.87■■□□□ 1.41
ERCC4-208ENST00000576348 E9PCH4 1651 aa23.86■■□□□ 1.41
ERCC4-208ENST00000576348 TONSLQ96HA7 1378 aa23.85■■□□□ 1.41
ERCC4-208ENST00000576348 CLTCQ00610 1675 aaKnown RBP23.83■■□□□ 1.41
ERCC4-208ENST00000576348 ZMYM3Q14202 1370 aa23.83■■□□□ 1.41
ERCC4-208ENST00000576348 PTPRTO14522 1441 aa23.83■■□□□ 1.4
ERCC4-208ENST00000576348 PLA2R1Q13018 1463 aa23.81■■□□□ 1.4
ERCC4-208ENST00000576348 TRPM2O94759 1503 aa23.79■■□□□ 1.4
ERCC4-208ENST00000576348 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
ERCC4-208ENST00000576348 TIMELESSQ9UNS1 1208 aa23.79■■□□□ 1.4
ERCC4-208ENST00000576348 FBXO31Q5XUX0 539 aaPredicted RBP23.78■■□□□ 1.4
ERCC4-208ENST00000576348 NOS1P29475 1434 aa23.76■■□□□ 1.39
ERCC4-208ENST00000576348 ERVK-7P63135 1459 aa23.75■■□□□ 1.39
ERCC4-208ENST00000576348 SPHKAPQ2M3C7 1700 aa23.75■■□□□ 1.39
ERCC4-208ENST00000576348 FER1L4A9Z1Z3 1794 aa23.74■■□□□ 1.39
ERCC4-208ENST00000576348 CHGAP10645 457 aaKnown RBP23.74■■□□□ 1.39
ERCC4-208ENST00000576348 SLC52A1Q9NWF4 448 aa23.74■■□□□ 1.39
ERCC4-208ENST00000576348 CEBPAP49715 358 aaPredicted RBP23.72■■□□□ 1.39
ERCC4-208ENST00000576348 MADDQ8WXG6 1647 aa23.72■■□□□ 1.39
ERCC4-208ENST00000576348 MROH2AA6NES4 1674 aa23.72■■□□□ 1.39
ERCC4-208ENST00000576348 TNRQ92752 1358 aa23.7■■□□□ 1.38
ERCC4-208ENST00000576348 RGL3Q3MIN7 710 aa23.7■■□□□ 1.38
ERCC4-208ENST00000576348 STAG3Q9UJ98 1225 aa23.69■■□□□ 1.38
ERCC4-208ENST00000576348 ADAMTSL3P82987 1691 aa23.68■■□□□ 1.38
ERCC4-208ENST00000576348 PREX1Q8TCU6 1659 aa23.68■■□□□ 1.38
ERCC4-208ENST00000576348 L3MBTL2Q969R5 705 aa23.68■■□□□ 1.38
ERCC4-208ENST00000576348 CLTCL1P53675 1640 aa23.68■■□□□ 1.38
ERCC4-208ENST00000576348 UGGT1Q9NYU2 1555 aa23.68■■□□□ 1.38
ERCC4-208ENST00000576348 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
ERCC4-208ENST00000576348 RIMS1Q86UR5 1692 aaKnown RBP23.67■■□□□ 1.38
ERCC4-208ENST00000576348 SYNMO15061 1565 aa23.66■■□□□ 1.38
ERCC4-208ENST00000576348 SPATA31D1Q6ZQQ2 1576 aa23.66■■□□□ 1.38
ERCC4-208ENST00000576348 IDI1Q13907 227 aa23.66■■□□□ 1.38
ERCC4-208ENST00000576348 DCAF11Q8TEB1 546 aa23.62■■□□□ 1.37
ERCC4-208ENST00000576348 SPATA31E1Q6ZUB1 1445 aa23.61■■□□□ 1.37
ERCC4-208ENST00000576348 KDM2AQ9Y2K7 1162 aa23.61■■□□□ 1.37
ERCC4-208ENST00000576348 CFAP65Q6ZU64 1925 aaKnown RBP23.61■■□□□ 1.37
ERCC4-208ENST00000576348 PPP1R15AO75807 674 aaPredicted RBP23.6■■□□□ 1.37
ERCC4-208ENST00000576348 C3P01024 1663 aa23.6■■□□□ 1.37
ERCC4-208ENST00000576348 PTPRMP28827 1452 aa23.58■■□□□ 1.37
ERCC4-208ENST00000576348 PIK3C2BO00750 1634 aa23.57■■□□□ 1.36
ERCC4-208ENST00000576348 NLRP1Q9C000 1473 aa23.56■■□□□ 1.36
ERCC4-208ENST00000576348 ADGRB3O60242 1522 aa23.56■■□□□ 1.36
ERCC4-208ENST00000576348 RPGRIP1LQ68CZ1 1315 aa23.56■■□□□ 1.36
ERCC4-208ENST00000576348 NEURL4Q96JN8 1562 aa23.54■■□□□ 1.36
ERCC4-208ENST00000576348 STAC3Q96MF2 364 aa23.54■■□□□ 1.36
ERCC4-208ENST00000576348 KIF1BO60333 1816 aa23.54■■□□□ 1.36
ERCC4-208ENST00000576348 KDM4FA0A1W2PPD8 638 aa23.51■■□□□ 1.35
ERCC4-208ENST00000576348 HDGFP51858 240 aaKnown RBP23.48■■□□□ 1.35
ERCC4-208ENST00000576348 A2ML1A8K2U0 1454 aa23.48■■□□□ 1.35
ERCC4-208ENST00000576348 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
ERCC4-208ENST00000576348 TMEM131LA2VDJ0 1609 aa23.46■■□□□ 1.35
ERCC4-208ENST00000576348 THEMISQ8N1K5 641 aaPredicted RBP23.46■■□□□ 1.35
ERCC4-208ENST00000576348 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.45■■□□□ 1.34
ERCC4-208ENST00000576348 NBPF8Q3BBV2 869 aa23.44■■□□□ 1.34
ERCC4-208ENST00000576348 NUTM2DQ5VT03 806 aaPredicted RBP23.44■■□□□ 1.34
ERCC4-208ENST00000576348 MYO3AQ8NEV4 1616 aa23.44■■□□□ 1.34
ERCC4-208ENST00000576348 MYOM2P54296 1465 aa23.43■■□□□ 1.34
ERCC4-208ENST00000576348 UHRF1BP1Q6BDS2 1440 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms