RNA–Protein interactions for RNA: ENST00000576069.5

SPNS3-206, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-206ENST00000576069 CEBPAP49715 358 aaPredicted RBP29.53■■■□□ 2.32
SPNS3-206ENST00000576069 PLPPR3Q6T4P5 718 aa29.53■■■□□ 2.32
SPNS3-206ENST00000576069 ROCK1Q13464 1354 aa29.52■■■□□ 2.32
SPNS3-206ENST00000576069 ITGAEP38570 1179 aa29.52■■■□□ 2.32
SPNS3-206ENST00000576069 ZMYM3Q14202 1370 aa29.52■■■□□ 2.32
SPNS3-206ENST00000576069 FAM135AQ9P2D6 1515 aa29.49■■■□□ 2.31
SPNS3-206ENST00000576069 WASHC2CQ9Y4E1 1318 aa29.48■■■□□ 2.31
SPNS3-206ENST00000576069 RNF17Q9BXT8 1623 aaKnown RBP29.47■■■□□ 2.31
SPNS3-206ENST00000576069 MROH2AA6NES4 1674 aa29.47■■■□□ 2.31
SPNS3-206ENST00000576069 CLTCQ00610 1675 aaKnown RBP29.44■■■□□ 2.3
SPNS3-206ENST00000576069 KDM5DQ9BY66 1539 aa29.43■■■□□ 2.3
SPNS3-206ENST00000576069 ANKRD50Q9ULJ7 1429 aa29.43■■■□□ 2.3
SPNS3-206ENST00000576069 C3P01024 1663 aa29.43■■■□□ 2.3
SPNS3-206ENST00000576069 MROH1Q8NDA8 1641 aa29.38■■■□□ 2.29
SPNS3-206ENST00000576069 NPATQ14207 1427 aa29.38■■■□□ 2.29
SPNS3-206ENST00000576069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.36■■■□□ 2.29
SPNS3-206ENST00000576069 KANK1Q14678 1352 aa29.36■■■□□ 2.29
SPNS3-206ENST00000576069 ABCC3O15438 1527 aa29.35■■■□□ 2.29
SPNS3-206ENST00000576069 PRDM15P57071 1507 aaPredicted RBP29.35■■■□□ 2.29
SPNS3-206ENST00000576069 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
SPNS3-206ENST00000576069 SETD1BQ9UPS6 1966 aaKnown RBP29.33■■■□□ 2.29
SPNS3-206ENST00000576069 ZC3H13Q5T200 1668 aaKnown RBP29.32■■■□□ 2.28
SPNS3-206ENST00000576069 LMTK3Q96Q04 1460 aa29.32■■■□□ 2.28
SPNS3-206ENST00000576069 PZPP20742 1482 aa29.3■■■□□ 2.28
SPNS3-206ENST00000576069 UHRF1BP1Q6BDS2 1440 aa29.29■■■□□ 2.28
SPNS3-206ENST00000576069 FBXO31Q5XUX0 539 aaPredicted RBP29.27■■■□□ 2.28
SPNS3-206ENST00000576069 PREX1Q8TCU6 1659 aa29.27■■■□□ 2.28
SPNS3-206ENST00000576069 VWDEQ8N2E2 1590 aa29.26■■■□□ 2.27
SPNS3-206ENST00000576069 ARHGAP31Q2M1Z3 1444 aa29.25■■■□□ 2.27
SPNS3-206ENST00000576069 LMTK2Q8IWU2 1503 aa29.25■■■□□ 2.27
SPNS3-206ENST00000576069 NAIPQ13075 1403 aa29.24■■■□□ 2.27
SPNS3-206ENST00000576069 HFM1A2PYH4 1435 aa29.21■■■□□ 2.27
SPNS3-206ENST00000576069 CEP152O94986 1710 aa29.21■■■□□ 2.27
SPNS3-206ENST00000576069 HSPA2P54652 639 aa29.2■■■□□ 2.26
SPNS3-206ENST00000576069 TNRQ92752 1358 aa29.2■■■□□ 2.26
SPNS3-206ENST00000576069 CAMSAP1Q5T5Y3 1602 aa29.2■■■□□ 2.26
SPNS3-206ENST00000576069 UNC13BO14795 1591 aa29.18■■■□□ 2.26
SPNS3-206ENST00000576069 NUP155O75694 1391 aa29.14■■■□□ 2.26
SPNS3-206ENST00000576069 ERVK-7P63135 1459 aa29.14■■■□□ 2.26
SPNS3-206ENST00000576069 SPATA31D1Q6ZQQ2 1576 aa29.13■■■□□ 2.25
SPNS3-206ENST00000576069 GCC2Q8IWJ2 1684 aa29.12■■■□□ 2.25
SPNS3-206ENST00000576069 MYO3AQ8NEV4 1616 aa29.11■■■□□ 2.25
SPNS3-206ENST00000576069 EFCAB6Q5THR3 1501 aa29.1■■■□□ 2.25
SPNS3-206ENST00000576069 A2ML1A8K2U0 1454 aa29.1■■■□□ 2.25
SPNS3-206ENST00000576069 NLRP1Q9C000 1473 aa29.1■■■□□ 2.25
SPNS3-206ENST00000576069 RPRD2Q5VT52 1461 aaKnown RBP29.08■■■□□ 2.25
SPNS3-206ENST00000576069 IQGAP3Q86VI3 1631 aa29.07■■■□□ 2.24
SPNS3-206ENST00000576069 CEP170BQ9Y4F5 1589 aaPredicted RBP29.07■■■□□ 2.24
SPNS3-206ENST00000576069 TET3O43151 1660 aa29.05■■■□□ 2.24
SPNS3-206ENST00000576069 ZNF142P52746 1687 aaPredicted RBP29.05■■■□□ 2.24
SPNS3-206ENST00000576069 NOS1P29475 1434 aa29.03■■■□□ 2.24
SPNS3-206ENST00000576069 THEMISQ8N1K5 641 aaPredicted RBP29.01■■■□□ 2.23
SPNS3-206ENST00000576069 ACIN1Q9UKV3 1341 aaKnown RBP29■■■□□ 2.23
SPNS3-206ENST00000576069 TRIM52Q96A61 297 aa29■■■□□ 2.23
SPNS3-206ENST00000576069 CFAP65Q6ZU64 1925 aaKnown RBP29■■■□□ 2.23
SPNS3-206ENST00000576069 SETD5Q9C0A6 1442 aa28.98■■■□□ 2.23
SPNS3-206ENST00000576069 SLC52A1Q9NWF4 448 aa28.98■■■□□ 2.23
SPNS3-206ENST00000576069 DMRT2Q9Y5R5 561 aa28.98■■■□□ 2.23
SPNS3-206ENST00000576069 PLA2R1Q13018 1463 aa28.97■■■□□ 2.23
SPNS3-206ENST00000576069 UGGT1Q9NYU2 1555 aa28.96■■■□□ 2.23
SPNS3-206ENST00000576069 PKD2Q13563 968 aa28.95■■■□□ 2.22
SPNS3-206ENST00000576069 IDI1Q13907 227 aa28.95■■■□□ 2.22
SPNS3-206ENST00000576069 E9PCH4 1651 aa28.93■■■□□ 2.22
SPNS3-206ENST00000576069 SYNMO15061 1565 aa28.92■■■□□ 2.22
SPNS3-206ENST00000576069 STRCQ7RTU9 1775 aa28.92■■■□□ 2.22
SPNS3-206ENST00000576069 SLC4A1APQ9BWU0 796 aaKnown RBP28.9■■■□□ 2.22
SPNS3-206ENST00000576069 NCKAP5LQ9HCH0 1330 aa28.89■■■□□ 2.21
SPNS3-206ENST00000576069 ANKLE2Q86XL3 938 aa28.88■■■□□ 2.21
SPNS3-206ENST00000576069 PTPRTO14522 1441 aa28.87■■■□□ 2.21
SPNS3-206ENST00000576069 STAG3Q9UJ98 1225 aa28.87■■■□□ 2.21
SPNS3-206ENST00000576069 HRCP23327 699 aa28.86■■■□□ 2.21
SPNS3-206ENST00000576069 RAB3GAP2Q9H2M9 1393 aa28.86■■■□□ 2.21
SPNS3-206ENST00000576069 UBR1Q8IWV7 1749 aa28.84■■■□□ 2.21
SPNS3-206ENST00000576069 PIK3C2BO00750 1634 aa28.83■■■□□ 2.21
SPNS3-206ENST00000576069 MPHOSPH9Q99550 1183 aa28.82■■■□□ 2.2
SPNS3-206ENST00000576069 KDM5AP29375 1690 aaKnown RBP28.81■■■□□ 2.2
SPNS3-206ENST00000576069 SLIT1O75093 1534 aa28.78■■■□□ 2.2
SPNS3-206ENST00000576069 ARHGAP23Q9P227 1491 aa28.78■■■□□ 2.2
SPNS3-206ENST00000576069 TMEM2Q9UHN6 1383 aa28.77■■■□□ 2.2
SPNS3-206ENST00000576069 ADGRB3O60242 1522 aa28.77■■■□□ 2.2
SPNS3-206ENST00000576069 EID1Q9Y6B2 187 aa28.76■■■□□ 2.19
SPNS3-206ENST00000576069 TXNDC2Q86VQ3 553 aa28.75■■■□□ 2.19
SPNS3-206ENST00000576069 MED14O60244 1454 aa28.74■■■□□ 2.19
SPNS3-206ENST00000576069 SPHKAPQ2M3C7 1700 aa28.74■■■□□ 2.19
SPNS3-206ENST00000576069 LTKP29376 864 aa28.73■■■□□ 2.19
SPNS3-206ENST00000576069 CHGAP10645 457 aaKnown RBP28.72■■■□□ 2.19
SPNS3-206ENST00000576069 TRPM2O94759 1503 aa28.71■■■□□ 2.19
SPNS3-206ENST00000576069 POLR1AO95602 1720 aaPredicted RBP28.71■■■□□ 2.19
SPNS3-206ENST00000576069 SCAF11Q99590 1463 aaKnown RBP28.71■■■□□ 2.19
SPNS3-206ENST00000576069 NEURL4Q96JN8 1562 aa28.71■■■□□ 2.19
SPNS3-206ENST00000576069 TMEM131LA2VDJ0 1609 aa28.7■■■□□ 2.19
SPNS3-206ENST00000576069 HDGFP51858 240 aaKnown RBP28.7■■■□□ 2.18
SPNS3-206ENST00000576069 TRIM26Q12899 539 aaPredicted RBP28.7■■■□□ 2.18
SPNS3-206ENST00000576069 NPHP4O75161 1426 aaPredicted RBP28.69■■■□□ 2.18
SPNS3-206ENST00000576069 FOXD1Q16676 465 aa28.69■■■□□ 2.18
SPNS3-206ENST00000576069 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.64■■■□□ 2.18
SPNS3-206ENST00000576069 ZFYVE9O95405 1425 aa28.63■■■□□ 2.17
SPNS3-206ENST00000576069 CLTCL1P53675 1640 aa28.62■■■□□ 2.17
SPNS3-206ENST00000576069 RIMS2Q9UQ26 1411 aa28.62■■■□□ 2.17
SPNS3-206ENST00000576069 IQGAP1P46940 1657 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms