RNA–Protein interactions for RNA: ENST00000575637.1

CHRNE-203, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 3

Gene CHRNE, Length 557 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-203ENST00000575637 NCOA1Q15788 1441 aa27.05■■□□□ 1.92
CHRNE-203ENST00000575637 ADGRL2O95490 1459 aa27.03■■□□□ 1.92
CHRNE-203ENST00000575637 PTPRKQ15262 1439 aa27.03■■□□□ 1.92
CHRNE-203ENST00000575637 EIF2AK4Q9P2K8 1649 aaKnown RBP27.02■■□□□ 1.92
CHRNE-203ENST00000575637 ERBINQ96RT1 1412 aa27.02■■□□□ 1.92
CHRNE-203ENST00000575637 WASHC2CQ9Y4E1 1318 aa27.01■■□□□ 1.91
CHRNE-203ENST00000575637 HSPA2P54652 639 aa27.01■■□□□ 1.91
CHRNE-203ENST00000575637 RNF17Q9BXT8 1623 aaKnown RBP27.01■■□□□ 1.91
CHRNE-203ENST00000575637 KDM5DQ9BY66 1539 aa27■■□□□ 1.91
CHRNE-203ENST00000575637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27■■□□□ 1.91
CHRNE-203ENST00000575637 FAM135AQ9P2D6 1515 aa27■■□□□ 1.91
CHRNE-203ENST00000575637 NPATQ14207 1427 aa26.99■■□□□ 1.91
CHRNE-203ENST00000575637 UHRF1BP1Q6BDS2 1440 aa26.98■■□□□ 1.91
CHRNE-203ENST00000575637 PREX1Q8TCU6 1659 aa26.97■■□□□ 1.91
CHRNE-203ENST00000575637 MROH1Q8NDA8 1641 aa26.96■■□□□ 1.91
CHRNE-203ENST00000575637 SETD1BQ9UPS6 1966 aaKnown RBP26.96■■□□□ 1.91
CHRNE-203ENST00000575637 RRBP1Q9P2E9 1410 aaKnown RBP26.96■■□□□ 1.91
CHRNE-203ENST00000575637 ITGAEP38570 1179 aa26.94■■□□□ 1.9
CHRNE-203ENST00000575637 ABCC3O15438 1527 aa26.93■■□□□ 1.9
CHRNE-203ENST00000575637 PZPP20742 1482 aa26.9■■□□□ 1.9
CHRNE-203ENST00000575637 ROCK1Q13464 1354 aa26.9■■□□□ 1.9
CHRNE-203ENST00000575637 FBXO31Q5XUX0 539 aaPredicted RBP26.9■■□□□ 1.9
CHRNE-203ENST00000575637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.89■■□□□ 1.9
CHRNE-203ENST00000575637 PRDM15P57071 1507 aaPredicted RBP26.89■■□□□ 1.89
CHRNE-203ENST00000575637 ANKRD50Q9ULJ7 1429 aa26.89■■□□□ 1.89
CHRNE-203ENST00000575637 DEPDC5O75140 1603 aa26.86■■□□□ 1.89
CHRNE-203ENST00000575637 ZC3H13Q5T200 1668 aaKnown RBP26.85■■□□□ 1.89
CHRNE-203ENST00000575637 KANK1Q14678 1352 aa26.83■■□□□ 1.88
CHRNE-203ENST00000575637 TNRQ92752 1358 aa26.83■■□□□ 1.88
CHRNE-203ENST00000575637 CEP152O94986 1710 aa26.81■■□□□ 1.88
CHRNE-203ENST00000575637 MYO3AQ8NEV4 1616 aa26.8■■□□□ 1.88
CHRNE-203ENST00000575637 VWDEQ8N2E2 1590 aa26.78■■□□□ 1.88
CHRNE-203ENST00000575637 CAMSAP1Q5T5Y3 1602 aa26.78■■□□□ 1.88
CHRNE-203ENST00000575637 CEP170BQ9Y4F5 1589 aaPredicted RBP26.76■■□□□ 1.87
CHRNE-203ENST00000575637 ARHGAP31Q2M1Z3 1444 aa26.76■■□□□ 1.87
CHRNE-203ENST00000575637 LMTK2Q8IWU2 1503 aa26.75■■□□□ 1.87
CHRNE-203ENST00000575637 ERVK-7P63135 1459 aa26.75■■□□□ 1.87
CHRNE-203ENST00000575637 SPATA31D1Q6ZQQ2 1576 aa26.74■■□□□ 1.87
CHRNE-203ENST00000575637 A2ML1A8K2U0 1454 aa26.74■■□□□ 1.87
CHRNE-203ENST00000575637 ZNF142P52746 1687 aaPredicted RBP26.73■■□□□ 1.87
CHRNE-203ENST00000575637 NLRP1Q9C000 1473 aa26.69■■□□□ 1.86
CHRNE-203ENST00000575637 STRCQ7RTU9 1775 aa26.69■■□□□ 1.86
CHRNE-203ENST00000575637 UNC13BO14795 1591 aa26.68■■□□□ 1.86
CHRNE-203ENST00000575637 EFCAB6Q5THR3 1501 aa26.66■■□□□ 1.86
CHRNE-203ENST00000575637 NAIPQ13075 1403 aa26.65■■□□□ 1.86
CHRNE-203ENST00000575637 PLA2R1Q13018 1463 aa26.64■■□□□ 1.86
CHRNE-203ENST00000575637 DMRT2Q9Y5R5 561 aa26.64■■□□□ 1.86
CHRNE-203ENST00000575637 CFAP65Q6ZU64 1925 aaKnown RBP26.63■■□□□ 1.85
CHRNE-203ENST00000575637 NCKAP5LQ9HCH0 1330 aa26.63■■□□□ 1.85
CHRNE-203ENST00000575637 NUP155O75694 1391 aa26.62■■□□□ 1.85
CHRNE-203ENST00000575637 UGGT1Q9NYU2 1555 aa26.6■■□□□ 1.85
CHRNE-203ENST00000575637 HFM1A2PYH4 1435 aa26.6■■□□□ 1.85
CHRNE-203ENST00000575637 PTPRTO14522 1441 aa26.59■■□□□ 1.85
CHRNE-203ENST00000575637 NOS1P29475 1434 aa26.59■■□□□ 1.85
CHRNE-203ENST00000575637 PKD2Q13563 968 aa26.59■■□□□ 1.85
CHRNE-203ENST00000575637 THEMISQ8N1K5 641 aaPredicted RBP26.59■■□□□ 1.85
CHRNE-203ENST00000575637 TET3O43151 1660 aa26.58■■□□□ 1.85
CHRNE-203ENST00000575637 RPRD2Q5VT52 1461 aaKnown RBP26.57■■□□□ 1.84
CHRNE-203ENST00000575637 IQGAP3Q86VI3 1631 aa26.57■■□□□ 1.84
CHRNE-203ENST00000575637 GCC2Q8IWJ2 1684 aa26.56■■□□□ 1.84
CHRNE-203ENST00000575637 SYNMO15061 1565 aa26.54■■□□□ 1.84
CHRNE-203ENST00000575637 IDI1Q13907 227 aa26.53■■□□□ 1.84
CHRNE-203ENST00000575637 ANKLE2Q86XL3 938 aa26.5■■□□□ 1.83
CHRNE-203ENST00000575637 UBR1Q8IWV7 1749 aa26.48■■□□□ 1.83
CHRNE-203ENST00000575637 SLC52A1Q9NWF4 448 aa26.48■■□□□ 1.83
CHRNE-203ENST00000575637 E9PCH4 1651 aa26.47■■□□□ 1.83
CHRNE-203ENST00000575637 PIK3C2BO00750 1634 aa26.47■■□□□ 1.83
CHRNE-203ENST00000575637 NEURL4Q96JN8 1562 aa26.46■■□□□ 1.83
CHRNE-203ENST00000575637 STAG3Q9UJ98 1225 aa26.45■■□□□ 1.82
CHRNE-203ENST00000575637 TRIM52Q96A61 297 aa26.44■■□□□ 1.82
CHRNE-203ENST00000575637 POLR1AO95602 1720 aaPredicted RBP26.42■■□□□ 1.82
CHRNE-203ENST00000575637 ARHGAP23Q9P227 1491 aa26.42■■□□□ 1.82
CHRNE-203ENST00000575637 SLIT1O75093 1534 aa26.41■■□□□ 1.82
CHRNE-203ENST00000575637 MED14O60244 1454 aa26.41■■□□□ 1.82
CHRNE-203ENST00000575637 NPHP4O75161 1426 aaPredicted RBP26.4■■□□□ 1.82
CHRNE-203ENST00000575637 TMEM2Q9UHN6 1383 aa26.4■■□□□ 1.82
CHRNE-203ENST00000575637 ADGRB3O60242 1522 aa26.39■■□□□ 1.82
CHRNE-203ENST00000575637 LTKP29376 864 aa26.39■■□□□ 1.82
CHRNE-203ENST00000575637 TXNDC2Q86VQ3 553 aa26.38■■□□□ 1.81
CHRNE-203ENST00000575637 CERKQ8TCT0 537 aa26.38■■□□□ 1.81
CHRNE-203ENST00000575637 ZNF335Q9H4Z2 1342 aaPredicted RBP26.38■■□□□ 1.81
CHRNE-203ENST00000575637 KDM5AP29375 1690 aaKnown RBP26.38■■□□□ 1.81
CHRNE-203ENST00000575637 SCAF11Q99590 1463 aaKnown RBP26.37■■□□□ 1.81
CHRNE-203ENST00000575637 SLC4A1APQ9BWU0 796 aaKnown RBP26.35■■□□□ 1.81
CHRNE-203ENST00000575637 EID1Q9Y6B2 187 aa26.35■■□□□ 1.81
CHRNE-203ENST00000575637 LTBP4Q8N2S1 1624 aa26.35■■□□□ 1.81
CHRNE-203ENST00000575637 SETD5Q9C0A6 1442 aa26.34■■□□□ 1.81
CHRNE-203ENST00000575637 CHGAP10645 457 aaKnown RBP26.32■■□□□ 1.8
CHRNE-203ENST00000575637 ILDR1Q86SU0 546 aaPredicted RBP26.32■■□□□ 1.8
CHRNE-203ENST00000575637 TMEM131LA2VDJ0 1609 aa26.31■■□□□ 1.8
CHRNE-203ENST00000575637 IQGAP1P46940 1657 aa26.3■■□□□ 1.8
CHRNE-203ENST00000575637 SPHKAPQ2M3C7 1700 aa26.28■■□□□ 1.8
CHRNE-203ENST00000575637 FBXO41Q8TF61 875 aa26.27■■□□□ 1.8
CHRNE-203ENST00000575637 ZFYVE9O95405 1425 aa26.26■■□□□ 1.79
CHRNE-203ENST00000575637 RAB3GAP2Q9H2M9 1393 aa26.26■■□□□ 1.79
CHRNE-203ENST00000575637 TRPM2O94759 1503 aa26.25■■□□□ 1.79
CHRNE-203ENST00000575637 RIMS2Q9UQ26 1411 aa26.25■■□□□ 1.79
CHRNE-203ENST00000575637 MPHOSPH9Q99550 1183 aa26.25■■□□□ 1.79
CHRNE-203ENST00000575637 MYO5BQ9ULV0 1848 aa26.23■■□□□ 1.79
CHRNE-203ENST00000575637 FOXD1Q16676 465 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms