RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 CAMSAP2Q08AD1 1489 aa22.38■■□□□ 1.17
CDC27-217ENST00000575483 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
CDC27-217ENST00000575483 CEP170BQ9Y4F5 1589 aaPredicted RBP22.36■■□□□ 1.17
CDC27-217ENST00000575483 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
CDC27-217ENST00000575483 ARHGEF5Q12774 1597 aa22.33■■□□□ 1.17
CDC27-217ENST00000575483 VPS8Q8N3P4 1428 aa22.32■■□□□ 1.16
CDC27-217ENST00000575483 GGT6Q6P531 493 aa22.32■■□□□ 1.16
CDC27-217ENST00000575483 PLA2R1Q13018 1463 aa22.32■■□□□ 1.16
CDC27-217ENST00000575483 TCOF1Q13428 1488 aaKnown RBP22.31■■□□□ 1.16
CDC27-217ENST00000575483 LRRC9Q6ZRR7 1453 aa22.3■■□□□ 1.16
CDC27-217ENST00000575483 FAM135AQ9P2D6 1515 aa22.3■■□□□ 1.16
CDC27-217ENST00000575483 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
CDC27-217ENST00000575483 DNMT1P26358 1616 aaKnown RBP22.27■■□□□ 1.16
CDC27-217ENST00000575483 MAP3K1Q13233 1512 aa22.26■■□□□ 1.15
CDC27-217ENST00000575483 KDM5DQ9BY66 1539 aa22.26■■□□□ 1.15
CDC27-217ENST00000575483 A2ML1A8K2U0 1454 aa22.25■■□□□ 1.15
CDC27-217ENST00000575483 MAST1Q9Y2H9 1570 aa22.25■■□□□ 1.15
CDC27-217ENST00000575483 LOC105371045A0A1W2PR82 267 aa22.24■■□□□ 1.15
CDC27-217ENST00000575483 RSPH4AQ5TD94 716 aa22.24■■□□□ 1.15
CDC27-217ENST00000575483 NCKAP5LQ9HCH0 1330 aa22.24■■□□□ 1.15
CDC27-217ENST00000575483 PZPP20742 1482 aa22.23■■□□□ 1.15
CDC27-217ENST00000575483 RNF17Q9BXT8 1623 aaKnown RBP22.22■■□□□ 1.15
CDC27-217ENST00000575483 KIF3BO15066 747 aa22.21■■□□□ 1.15
CDC27-217ENST00000575483 POLR1AO95602 1720 aaPredicted RBP22.2■■□□□ 1.14
CDC27-217ENST00000575483 PKD2Q13563 968 aa22.19■■□□□ 1.14
CDC27-217ENST00000575483 KANK4Q5T7N3 995 aaPredicted RBP22.19■■□□□ 1.14
CDC27-217ENST00000575483 NEURL4Q96JN8 1562 aa22.19■■□□□ 1.14
CDC27-217ENST00000575483 ZNF335Q9H4Z2 1342 aaPredicted RBP22.18■■□□□ 1.14
CDC27-217ENST00000575483 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
CDC27-217ENST00000575483 FBXO31Q5XUX0 539 aaPredicted RBP22.17■■□□□ 1.14
CDC27-217ENST00000575483 EIF2AK4Q9P2K8 1649 aaKnown RBP22.17■■□□□ 1.14
CDC27-217ENST00000575483 TNRQ92752 1358 aa22.16■■□□□ 1.14
CDC27-217ENST00000575483 MYOM3Q5VTT5 1437 aa22.15■■□□□ 1.14
CDC27-217ENST00000575483 MIA2Q96PC5 1412 aa22.15■■□□□ 1.14
CDC27-217ENST00000575483 ZC3H13Q5T200 1668 aaKnown RBP22.15■■□□□ 1.14
CDC27-217ENST00000575483 ABCC3O15438 1527 aa22.14■■□□□ 1.13
CDC27-217ENST00000575483 WASHC2CQ9Y4E1 1318 aa22.11■■□□□ 1.13
CDC27-217ENST00000575483 TSPY4P0CV99 314 aa22.11■■□□□ 1.13
CDC27-217ENST00000575483 TSPY10P0CW01 314 aa22.11■■□□□ 1.13
CDC27-217ENST00000575483 CROCC2H7BZ55 1655 aa22.11■■□□□ 1.13
CDC27-217ENST00000575483 NLRP1Q9C000 1473 aa22.1■■□□□ 1.13
CDC27-217ENST00000575483 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
CDC27-217ENST00000575483 CEP152O94986 1710 aa22.08■■□□□ 1.12
CDC27-217ENST00000575483 DEPDC5O75140 1603 aa22.07■■□□□ 1.12
CDC27-217ENST00000575483 UGGT1Q9NYU2 1555 aa22.06■■□□□ 1.12
CDC27-217ENST00000575483 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
CDC27-217ENST00000575483 VWDEQ8N2E2 1590 aa22.04■■□□□ 1.12
CDC27-217ENST00000575483 MED14O60244 1454 aa22.04■■□□□ 1.12
CDC27-217ENST00000575483 ERVK-7P63135 1459 aa22.04■■□□□ 1.12
CDC27-217ENST00000575483 SHANK2Q9UPX8 1470 aa22.04■■□□□ 1.12
CDC27-217ENST00000575483 PTPN23Q9H3S7 1636 aa22.03■■□□□ 1.12
CDC27-217ENST00000575483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
CDC27-217ENST00000575483 PRDM15P57071 1507 aaPredicted RBP22.03■■□□□ 1.12
CDC27-217ENST00000575483 ABCC5O15440 1437 aa22.02■■□□□ 1.12
CDC27-217ENST00000575483 CPS1P31327 1500 aa22.01■■□□□ 1.11
CDC27-217ENST00000575483 CFAP65Q6ZU64 1925 aaKnown RBP22■■□□□ 1.11
CDC27-217ENST00000575483 DISP3Q9P2K9 1392 aa21.99■■□□□ 1.11
CDC27-217ENST00000575483 IQGAP1P46940 1657 aa21.99■■□□□ 1.11
CDC27-217ENST00000575483 UBR1Q8IWV7 1749 aa21.99■■□□□ 1.11
CDC27-217ENST00000575483 UBAP1LF5GYI3 381 aa21.97■■□□□ 1.11
CDC27-217ENST00000575483 ILDR2Q71H61 639 aa21.97■■□□□ 1.11
CDC27-217ENST00000575483 THEMISQ8N1K5 641 aaPredicted RBP21.97■■□□□ 1.11
CDC27-217ENST00000575483 KIF15Q9NS87 1388 aa21.97■■□□□ 1.11
CDC27-217ENST00000575483 STRCP1A6NGW2 1772 aa21.97■■□□□ 1.11
CDC27-217ENST00000575483 NPHP4O75161 1426 aaPredicted RBP21.97■■□□□ 1.11
CDC27-217ENST00000575483 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
CDC27-217ENST00000575483 ANKLE2Q86XL3 938 aa21.96■■□□□ 1.11
CDC27-217ENST00000575483 DAPK1P53355 1430 aa21.96■■□□□ 1.11
CDC27-217ENST00000575483 FGD6Q6ZV73 1430 aa21.96■■□□□ 1.11
CDC27-217ENST00000575483 ARHGAP31Q2M1Z3 1444 aa21.95■■□□□ 1.1
CDC27-217ENST00000575483 ALKQ9UM73 1620 aa21.95■■□□□ 1.1
CDC27-217ENST00000575483 DCAF8L1A6NGE4 600 aa21.94■■□□□ 1.1
CDC27-217ENST00000575483 ARHGAP23Q9P227 1491 aa21.9■■□□□ 1.1
CDC27-217ENST00000575483 SLIT1O75093 1534 aa21.89■■□□□ 1.09
CDC27-217ENST00000575483 RRP7BPQ9NSQ0 103 aa21.88■■□□□ 1.09
CDC27-217ENST00000575483 LMTK2Q8IWU2 1503 aa21.88■■□□□ 1.09
CDC27-217ENST00000575483 PIK3C2BO00750 1634 aa21.87■■□□□ 1.09
CDC27-217ENST00000575483 SYNMO15061 1565 aa21.87■■□□□ 1.09
CDC27-217ENST00000575483 SCAF11Q99590 1463 aaKnown RBP21.85■■□□□ 1.09
CDC27-217ENST00000575483 KDM5AP29375 1690 aaKnown RBP21.85■■□□□ 1.09
CDC27-217ENST00000575483 ADGRL2O95490 1459 aa21.84■■□□□ 1.09
CDC27-217ENST00000575483 LRRC7Q96NW7 1537 aa21.84■■□□□ 1.09
CDC27-217ENST00000575483 SLC4A1APQ9BWU0 796 aaKnown RBP21.83■■□□□ 1.09
CDC27-217ENST00000575483 APLP2Q06481 763 aa21.82■■□□□ 1.08
CDC27-217ENST00000575483 ANKRD30AQ9BXX3 1397 aa21.81■■□□□ 1.08
CDC27-217ENST00000575483 EFCAB6Q5THR3 1501 aa21.8■■□□□ 1.08
CDC27-217ENST00000575483 XIRP1Q702N8 1843 aaKnown RBP21.8■■□□□ 1.08
CDC27-217ENST00000575483 SOCS7O14512 581 aa21.8■■□□□ 1.08
CDC27-217ENST00000575483 LTKP29376 864 aa21.8■■□□□ 1.08
CDC27-217ENST00000575483 TOM1O60784 492 aa21.79■■□□□ 1.08
CDC27-217ENST00000575483 HSPA1LP34931 641 aa21.79■■□□□ 1.08
CDC27-217ENST00000575483 NOS1P29475 1434 aa21.77■■□□□ 1.08
CDC27-217ENST00000575483 PIP4K2BP78356 416 aa21.76■■□□□ 1.07
CDC27-217ENST00000575483 MED1Q15648 1581 aaPredicted RBP21.76■■□□□ 1.07
CDC27-217ENST00000575483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.76■■□□□ 1.072e-6■■□□□ 14.1
CDC27-217ENST00000575483 CHIC2Q9UKJ5 165 aa21.76■■□□□ 1.07
CDC27-217ENST00000575483 KANK1Q14678 1352 aa21.75■■□□□ 1.07
CDC27-217ENST00000575483 TMEM2Q9UHN6 1383 aa21.75■■□□□ 1.07
CDC27-217ENST00000575483 TET3O43151 1660 aa21.72■■□□□ 1.07
CDC27-217ENST00000575483 TXNDC2Q86VQ3 553 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms