RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 CROCC2H7BZ55 1655 aa18.67■□□□□ 0.58
USP43-206ENST00000575346 EIF2AK4Q9P2K8 1649 aaKnown RBP18.67■□□□□ 0.58
USP43-206ENST00000575346 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
USP43-206ENST00000575346 KDM5DQ9BY66 1539 aa18.65■□□□□ 0.58
USP43-206ENST00000575346 RNF17Q9BXT8 1623 aaKnown RBP18.65■□□□□ 0.58
USP43-206ENST00000575346 DAPK1P53355 1430 aa18.65■□□□□ 0.58
USP43-206ENST00000575346 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.57
USP43-206ENST00000575346 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
USP43-206ENST00000575346 ZNF142P52746 1687 aaPredicted RBP18.61■□□□□ 0.57
USP43-206ENST00000575346 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
USP43-206ENST00000575346 PZPP20742 1482 aa18.6■□□□□ 0.57
USP43-206ENST00000575346 WASHC2CQ9Y4E1 1318 aa18.6■□□□□ 0.57
USP43-206ENST00000575346 KIF15Q9NS87 1388 aa18.59■□□□□ 0.57
USP43-206ENST00000575346 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
USP43-206ENST00000575346 ZC3H13Q5T200 1668 aaKnown RBP18.59■□□□□ 0.57
USP43-206ENST00000575346 MROH1Q8NDA8 1641 aa18.59■□□□□ 0.57
USP43-206ENST00000575346 ERBINQ96RT1 1412 aa18.58■□□□□ 0.57
USP43-206ENST00000575346 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
USP43-206ENST00000575346 CEP170BQ9Y4F5 1589 aaPredicted RBP18.57■□□□□ 0.56
USP43-206ENST00000575346 ABCC3O15438 1527 aa18.56■□□□□ 0.56
USP43-206ENST00000575346 PTPRTO14522 1441 aa18.56■□□□□ 0.56
USP43-206ENST00000575346 ADGRL2O95490 1459 aa18.55■□□□□ 0.56
USP43-206ENST00000575346 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
USP43-206ENST00000575346 PLA2R1Q13018 1463 aa18.54■□□□□ 0.56
USP43-206ENST00000575346 CAMSAP1Q5T5Y3 1602 aa18.54■□□□□ 0.56
USP43-206ENST00000575346 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
USP43-206ENST00000575346 PRDM15P57071 1507 aaPredicted RBP18.54■□□□□ 0.56
USP43-206ENST00000575346 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
USP43-206ENST00000575346 TNRQ92752 1358 aa18.53■□□□□ 0.56
USP43-206ENST00000575346 DEPDC5O75140 1603 aa18.52■□□□□ 0.56
USP43-206ENST00000575346 FBXO31Q5XUX0 539 aaPredicted RBP18.52■□□□□ 0.56
USP43-206ENST00000575346 SPATA31D1Q6ZQQ2 1576 aa18.5■□□□□ 0.55
USP43-206ENST00000575346 CEP152O94986 1710 aa18.49■□□□□ 0.55
USP43-206ENST00000575346 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
USP43-206ENST00000575346 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
USP43-206ENST00000575346 NLRP1Q9C000 1473 aa18.49■□□□□ 0.55
USP43-206ENST00000575346 ARHGAP31Q2M1Z3 1444 aa18.49■□□□□ 0.55
USP43-206ENST00000575346 PKD2Q13563 968 aa18.48■□□□□ 0.55
USP43-206ENST00000575346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.47■□□□□ 0.55
USP43-206ENST00000575346 VWDEQ8N2E2 1590 aa18.46■□□□□ 0.55
USP43-206ENST00000575346 ERVK-7P63135 1459 aa18.46■□□□□ 0.54
USP43-206ENST00000575346 LMTK2Q8IWU2 1503 aa18.45■□□□□ 0.54
USP43-206ENST00000575346 KANK1Q14678 1352 aa18.43■□□□□ 0.54
USP43-206ENST00000575346 NCKAP5LQ9HCH0 1330 aa18.43■□□□□ 0.54
USP43-206ENST00000575346 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
USP43-206ENST00000575346 ANKRD50Q9ULJ7 1429 aa18.42■□□□□ 0.54
USP43-206ENST00000575346 UGGT1Q9NYU2 1555 aa18.42■□□□□ 0.54
USP43-206ENST00000575346 THEMISQ8N1K5 641 aaPredicted RBP18.4■□□□□ 0.54
USP43-206ENST00000575346 LTBP4Q8N2S1 1624 aa18.4■□□□□ 0.54
USP43-206ENST00000575346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.53
USP43-206ENST00000575346 POLR1AO95602 1720 aaPredicted RBP18.39■□□□□ 0.53
USP43-206ENST00000575346 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
USP43-206ENST00000575346 NEURL4Q96JN8 1562 aa18.37■□□□□ 0.53
USP43-206ENST00000575346 CFAP65Q6ZU64 1925 aaKnown RBP18.37■□□□□ 0.53
USP43-206ENST00000575346 RRBP1Q9P2E9 1410 aaKnown RBP18.36■□□□□ 0.53
USP43-206ENST00000575346 EFCAB6Q5THR3 1501 aa18.35■□□□□ 0.53
USP43-206ENST00000575346 MED14O60244 1454 aa18.35■□□□□ 0.53
USP43-206ENST00000575346 ANKLE2Q86XL3 938 aa18.35■□□□□ 0.53
USP43-206ENST00000575346 UBR1Q8IWV7 1749 aa18.35■□□□□ 0.53
USP43-206ENST00000575346 UNC13BO14795 1591 aa18.34■□□□□ 0.53
USP43-206ENST00000575346 IQSEC2Q5JU85 1478 aa18.34■□□□□ 0.53
USP43-206ENST00000575346 DISP3Q9P2K9 1392 aa18.34■□□□□ 0.53
USP43-206ENST00000575346 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
USP43-206ENST00000575346 RPRD2Q5VT52 1461 aaKnown RBP18.33■□□□□ 0.52
USP43-206ENST00000575346 NOS1P29475 1434 aa18.32■□□□□ 0.52
USP43-206ENST00000575346 KDM5AP29375 1690 aaKnown RBP18.31■□□□□ 0.52
USP43-206ENST00000575346 TET3O43151 1660 aa18.31■□□□□ 0.52
USP43-206ENST00000575346 ZNF335Q9H4Z2 1342 aaPredicted RBP18.3■□□□□ 0.52
USP43-206ENST00000575346 SLIT1O75093 1534 aa18.3■□□□□ 0.52
USP43-206ENST00000575346 ARHGAP23Q9P227 1491 aa18.3■□□□□ 0.52
USP43-206ENST00000575346 SYNMO15061 1565 aa18.3■□□□□ 0.52
USP43-206ENST00000575346 PIK3C2BO00750 1634 aa18.29■□□□□ 0.52
USP43-206ENST00000575346 NPHP4O75161 1426 aaPredicted RBP18.28■□□□□ 0.52
USP43-206ENST00000575346 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
USP43-206ENST00000575346 IQGAP3Q86VI3 1631 aa18.27■□□□□ 0.51
USP43-206ENST00000575346 IQGAP1P46940 1657 aa18.26■□□□□ 0.51
USP43-206ENST00000575346 ITGAEP38570 1179 aa18.26■□□□□ 0.51
USP43-206ENST00000575346 IDI1Q13907 227 aa18.26■□□□□ 0.51
USP43-206ENST00000575346 SLC52A1Q9NWF4 448 aa18.25■□□□□ 0.51
USP43-206ENST00000575346 SOCS7O14512 581 aa18.24■□□□□ 0.51
USP43-206ENST00000575346 SCAF11Q99590 1463 aaKnown RBP18.24■□□□□ 0.51
USP43-206ENST00000575346 TMEM2Q9UHN6 1383 aa18.23■□□□□ 0.51
USP43-206ENST00000575346 CPS1P31327 1500 aa18.23■□□□□ 0.51
USP43-206ENST00000575346 LTKP29376 864 aa18.22■□□□□ 0.51
USP43-206ENST00000575346 E9PCH4 1651 aa18.22■□□□□ 0.51
USP43-206ENST00000575346 ADGRB3O60242 1522 aa18.21■□□□□ 0.51
USP43-206ENST00000575346 NUP155O75694 1391 aa18.2■□□□□ 0.5
USP43-206ENST00000575346 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
USP43-206ENST00000575346 TXNDC2Q86VQ3 553 aa18.2■□□□□ 0.5
USP43-206ENST00000575346 NAIPQ13075 1403 aa18.19■□□□□ 0.5
USP43-206ENST00000575346 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
USP43-206ENST00000575346 EID1Q9Y6B2 187 aa18.19■□□□□ 0.5
USP43-206ENST00000575346 HFM1A2PYH4 1435 aa18.15■□□□□ 0.5
USP43-206ENST00000575346 TMEM131LA2VDJ0 1609 aa18.15■□□□□ 0.5
USP43-206ENST00000575346 STRCP1A6NGW2 1772 aa18.14■□□□□ 0.49
USP43-206ENST00000575346 ZFYVE9O95405 1425 aa18.12■□□□□ 0.49
USP43-206ENST00000575346 MYO5BQ9ULV0 1848 aa18.11■□□□□ 0.49
USP43-206ENST00000575346 LRRC7Q96NW7 1537 aa18.09■□□□□ 0.49
USP43-206ENST00000575346 SPHKAPQ2M3C7 1700 aa18.09■□□□□ 0.49
USP43-206ENST00000575346 HDGFP51858 240 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms