RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 CLTCQ00610 1675 aaKnown RBP15.09■□□□□ 0.01
NDE1-210ENST00000574163 KIF15Q9NS87 1388 aa15.09■□□□□ 0.01
NDE1-210ENST00000574163 KCNA4P22459 653 aa15.08■□□□□ 0
NDE1-210ENST00000574163 PREX1Q8TCU6 1659 aa15.08■□□□□ 0
NDE1-210ENST00000574163 ANKRD30AQ9BXX3 1397 aa15.07■□□□□ 0
NDE1-210ENST00000574163 SETD1BQ9UPS6 1966 aaKnown RBP15.07■□□□□ 0
NDE1-210ENST00000574163 RRBP1Q9P2E9 1410 aaKnown RBP15.07■□□□□ 0
NDE1-210ENST00000574163 DEPDC5O75140 1603 aa15.06■□□□□ 0
NDE1-210ENST00000574163 MROH1Q8NDA8 1641 aa15.06■□□□□ 0
NDE1-210ENST00000574163 PRDM15P57071 1507 aaPredicted RBP15.06■□□□□ 0
NDE1-210ENST00000574163 ESF1Q9H501 851 aaKnown RBP15.05■□□□□ -0
NDE1-210ENST00000574163 NCOA1Q15788 1441 aa15.05■□□□□ -0
NDE1-210ENST00000574163 LMTK3Q96Q04 1460 aa15.04■□□□□ -0
NDE1-210ENST00000574163 NPATQ14207 1427 aa15.04■□□□□ -0
NDE1-210ENST00000574163 FAM50AQ14320 339 aaKnown RBP15.04■□□□□ -0
NDE1-210ENST00000574163 ROCK1Q13464 1354 aa15.02■□□□□ -0
NDE1-210ENST00000574163 KIF3BO15066 747 aa15.02■□□□□ -0
NDE1-210ENST00000574163 ABCC3O15438 1527 aa15.02□□□□□ -0.01
NDE1-210ENST00000574163 GGT6Q6P531 493 aa15□□□□□ -0.01
NDE1-210ENST00000574163 PZPP20742 1482 aa15□□□□□ -0.01
NDE1-210ENST00000574163 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
NDE1-210ENST00000574163 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
NDE1-210ENST00000574163 CEP152O94986 1710 aa14.99□□□□□ -0.01
NDE1-210ENST00000574163 PTPRKQ15262 1439 aa14.99□□□□□ -0.01
NDE1-210ENST00000574163 UHRF1BP1Q6BDS2 1440 aa14.99□□□□□ -0.01
NDE1-210ENST00000574163 CAMSAP1Q5T5Y3 1602 aa14.99□□□□□ -0.01
NDE1-210ENST00000574163 ZMYM3Q14202 1370 aa14.98□□□□□ -0.01
NDE1-210ENST00000574163 VWDEQ8N2E2 1590 aa14.98□□□□□ -0.01
NDE1-210ENST00000574163 MYO3AQ8NEV4 1616 aa14.98□□□□□ -0.01
NDE1-210ENST00000574163 PPARGC1BQ86YN6 1023 aaKnown RBP14.97□□□□□ -0.01
NDE1-210ENST00000574163 RRP7BPQ9NSQ0 103 aa14.97□□□□□ -0.01
NDE1-210ENST00000574163 UNC13BO14795 1591 aa14.97□□□□□ -0.01
NDE1-210ENST00000574163 ANKRD50Q9ULJ7 1429 aa14.96□□□□□ -0.01
NDE1-210ENST00000574163 LMTK2Q8IWU2 1503 aa14.96□□□□□ -0.02
NDE1-210ENST00000574163 CEBPAP49715 358 aaPredicted RBP14.95□□□□□ -0.02
NDE1-210ENST00000574163 CHIC2Q9UKJ5 165 aa14.95□□□□□ -0.02
NDE1-210ENST00000574163 GCC2Q8IWJ2 1684 aa14.95□□□□□ -0.02
NDE1-210ENST00000574163 SPATA31D1Q6ZQQ2 1576 aa14.94□□□□□ -0.02
NDE1-210ENST00000574163 WASHC2CQ9Y4E1 1318 aa14.93□□□□□ -0.02
NDE1-210ENST00000574163 KANK1Q14678 1352 aa14.93□□□□□ -0.02
NDE1-210ENST00000574163 ARHGAP31Q2M1Z3 1444 aa14.92□□□□□ -0.02
NDE1-210ENST00000574163 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
NDE1-210ENST00000574163 EFCAB6Q5THR3 1501 aa14.92□□□□□ -0.02
NDE1-210ENST00000574163 ERVK-7P63135 1459 aa14.9□□□□□ -0.02
NDE1-210ENST00000574163 TET3O43151 1660 aa14.9□□□□□ -0.02
NDE1-210ENST00000574163 NLRP1Q9C000 1473 aa14.89□□□□□ -0.03
NDE1-210ENST00000574163 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
NDE1-210ENST00000574163 TNRQ92752 1358 aa14.89□□□□□ -0.03
NDE1-210ENST00000574163 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
NDE1-210ENST00000574163 MSH5O43196 834 aa14.88□□□□□ -0.03
NDE1-210ENST00000574163 RPRD2Q5VT52 1461 aaKnown RBP14.87□□□□□ -0.03
NDE1-210ENST00000574163 HFM1A2PYH4 1435 aa14.86□□□□□ -0.03
NDE1-210ENST00000574163 PLA2R1Q13018 1463 aa14.86□□□□□ -0.03
NDE1-210ENST00000574163 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
NDE1-210ENST00000574163 NAIPQ13075 1403 aa14.84□□□□□ -0.03
NDE1-210ENST00000574163 ITGAEP38570 1179 aa14.84□□□□□ -0.03
NDE1-210ENST00000574163 HSPA2P54652 639 aa14.83□□□□□ -0.04
NDE1-210ENST00000574163 KDM5AP29375 1690 aaKnown RBP14.83□□□□□ -0.04
NDE1-210ENST00000574163 CFAP65Q6ZU64 1925 aaKnown RBP14.82□□□□□ -0.04
NDE1-210ENST00000574163 POLR1AO95602 1720 aaPredicted RBP14.81□□□□□ -0.04
NDE1-210ENST00000574163 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
NDE1-210ENST00000574163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.042e-8■■□□□ 13.1
NDE1-210ENST00000574163 NOS1P29475 1434 aa14.81□□□□□ -0.04
NDE1-210ENST00000574163 SYNMO15061 1565 aa14.81□□□□□ -0.04
NDE1-210ENST00000574163 UGGT1Q9NYU2 1555 aa14.81□□□□□ -0.04
NDE1-210ENST00000574163 E9PCH4 1651 aa14.8□□□□□ -0.04
NDE1-210ENST00000574163 UBR1Q8IWV7 1749 aa14.8□□□□□ -0.04
NDE1-210ENST00000574163 PTPRTO14522 1441 aa14.78□□□□□ -0.04
NDE1-210ENST00000574163 PIK3C2BO00750 1634 aa14.77□□□□□ -0.05
NDE1-210ENST00000574163 NUP155O75694 1391 aa14.76□□□□□ -0.05
NDE1-210ENST00000574163 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
NDE1-210ENST00000574163 ADGRB3O60242 1522 aa14.75□□□□□ -0.05
NDE1-210ENST00000574163 SPHKAPQ2M3C7 1700 aa14.75□□□□□ -0.05
NDE1-210ENST00000574163 NEURL4Q96JN8 1562 aa14.74□□□□□ -0.05
NDE1-210ENST00000574163 SLIT1O75093 1534 aa14.73□□□□□ -0.05
NDE1-210ENST00000574163 PKD2Q13563 968 aa14.73□□□□□ -0.05
NDE1-210ENST00000574163 ARHGAP23Q9P227 1491 aa14.72□□□□□ -0.05
NDE1-210ENST00000574163 THEMISQ8N1K5 641 aaPredicted RBP14.72□□□□□ -0.05
NDE1-210ENST00000574163 ACIN1Q9UKV3 1341 aaKnown RBP14.71□□□□□ -0.05
NDE1-210ENST00000574163 MED14O60244 1454 aa14.7□□□□□ -0.06
NDE1-210ENST00000574163 IQGAP1P46940 1657 aa14.69□□□□□ -0.06
NDE1-210ENST00000574163 SLC52A1Q9NWF4 448 aa14.69□□□□□ -0.06
NDE1-210ENST00000574163 TRPM2O94759 1503 aa14.69□□□□□ -0.06
NDE1-210ENST00000574163 SCAF11Q99590 1463 aaKnown RBP14.69□□□□□ -0.06
NDE1-210ENST00000574163 TMEM131LA2VDJ0 1609 aa14.68□□□□□ -0.06
NDE1-210ENST00000574163 MYO5BQ9ULV0 1848 aa14.67□□□□□ -0.06
NDE1-210ENST00000574163 SETD5Q9C0A6 1442 aa14.66□□□□□ -0.06
NDE1-210ENST00000574163 TMEM2Q9UHN6 1383 aa14.65□□□□□ -0.06
NDE1-210ENST00000574163 IDI1Q13907 227 aa14.65□□□□□ -0.06
NDE1-210ENST00000574163 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
NDE1-210ENST00000574163 NPHP4O75161 1426 aaPredicted RBP14.65□□□□□ -0.06
NDE1-210ENST00000574163 NCKAP5LQ9HCH0 1330 aa14.65□□□□□ -0.06
NDE1-210ENST00000574163 CLTCL1P53675 1640 aa14.63□□□□□ -0.07
NDE1-210ENST00000574163 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
NDE1-210ENST00000574163 LTBP4Q8N2S1 1624 aa14.63□□□□□ -0.07
NDE1-210ENST00000574163 ZFYVE9O95405 1425 aa14.62□□□□□ -0.07
NDE1-210ENST00000574163 TRIM52Q96A61 297 aa14.61□□□□□ -0.07
NDE1-210ENST00000574163 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
NDE1-210ENST00000574163 IQSEC2Q5JU85 1478 aa14.61□□□□□ -0.07
NDE1-210ENST00000574163 KIF1BO60333 1816 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms