RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 MROH1Q8NDA8 1641 aa20.43■□□□□ 0.86
NDE1-209ENST00000574109 RRP7BPQ9NSQ0 103 aa20.43■□□□□ 0.86
NDE1-209ENST00000574109 ARID4BQ4LE39 1312 aaPredicted RBP20.42■□□□□ 0.86
NDE1-209ENST00000574109 KDM5DQ9BY66 1539 aa20.42■□□□□ 0.86
NDE1-209ENST00000574109 MADDQ8WXG6 1647 aa20.42■□□□□ 0.86
NDE1-209ENST00000574109 ACIN1Q9UKV3 1341 aaKnown RBP20.41■□□□□ 0.86
NDE1-209ENST00000574109 TRIM26Q12899 539 aaPredicted RBP20.4■□□□□ 0.86
NDE1-209ENST00000574109 CNTLNQ9NXG0 1405 aa20.4■□□□□ 0.86
NDE1-209ENST00000574109 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
NDE1-209ENST00000574109 IQGAP3Q86VI3 1631 aa20.38■□□□□ 0.85
NDE1-209ENST00000574109 CEP152O94986 1710 aa20.38■□□□□ 0.85
NDE1-209ENST00000574109 RIMS1Q86UR5 1692 aaKnown RBP20.38■□□□□ 0.85
NDE1-209ENST00000574109 VWDEQ8N2E2 1590 aa20.38■□□□□ 0.85
NDE1-209ENST00000574109 CLTCQ00610 1675 aaKnown RBP20.37■□□□□ 0.85
NDE1-209ENST00000574109 KIF3BO15066 747 aa20.36■□□□□ 0.85
NDE1-209ENST00000574109 KANK1Q14678 1352 aa20.35■□□□□ 0.85
NDE1-209ENST00000574109 CAMSAP1Q5T5Y3 1602 aa20.35■□□□□ 0.85
NDE1-209ENST00000574109 LMTK2Q8IWU2 1503 aa20.34■□□□□ 0.85
NDE1-209ENST00000574109 TET3O43151 1660 aa20.34■□□□□ 0.85
NDE1-209ENST00000574109 SETD5Q9C0A6 1442 aa20.34■□□□□ 0.85
NDE1-209ENST00000574109 ABCC3O15438 1527 aa20.33■□□□□ 0.85
NDE1-209ENST00000574109 C3P01024 1663 aa20.3■□□□□ 0.84
NDE1-209ENST00000574109 EFCAB6Q5THR3 1501 aa20.3■□□□□ 0.84
NDE1-209ENST00000574109 ESF1Q9H501 851 aaKnown RBP20.29■□□□□ 0.84
NDE1-209ENST00000574109 GGT6Q6P531 493 aa20.27■□□□□ 0.84
NDE1-209ENST00000574109 MLECQ14165 292 aa20.26■□□□□ 0.83
NDE1-209ENST00000574109 RPRD2Q5VT52 1461 aaKnown RBP20.25■□□□□ 0.83
NDE1-209ENST00000574109 RAB3GAP2Q9H2M9 1393 aa20.25■□□□□ 0.83
NDE1-209ENST00000574109 PZPP20742 1482 aa20.24■□□□□ 0.83
NDE1-209ENST00000574109 ARHGAP31Q2M1Z3 1444 aa20.24■□□□□ 0.83
NDE1-209ENST00000574109 WASHC2CQ9Y4E1 1318 aa20.24■□□□□ 0.83
NDE1-209ENST00000574109 PTPRMP28827 1452 aa20.24■□□□□ 0.83
NDE1-209ENST00000574109 HRCP23327 699 aa20.23■□□□□ 0.83
NDE1-209ENST00000574109 E9PCH4 1651 aa20.22■□□□□ 0.83
NDE1-209ENST00000574109 PREX1Q8TCU6 1659 aa20.22■□□□□ 0.83
NDE1-209ENST00000574109 SETD1BQ9UPS6 1966 aaKnown RBP20.21■□□□□ 0.83
NDE1-209ENST00000574109 NUP155O75694 1391 aa20.21■□□□□ 0.83
NDE1-209ENST00000574109 NPATQ14207 1427 aa20.19■□□□□ 0.82
NDE1-209ENST00000574109 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
NDE1-209ENST00000574109 SPATA31D1Q6ZQQ2 1576 aa20.18■□□□□ 0.82
NDE1-209ENST00000574109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.17■□□□□ 0.825e-12■□□□□ 9.3
NDE1-209ENST00000574109 KDM4FA0A1W2PPD8 638 aa20.16■□□□□ 0.82
NDE1-209ENST00000574109 ZMYM3Q14202 1370 aa20.16■□□□□ 0.82
NDE1-209ENST00000574109 ZNF142P52746 1687 aaPredicted RBP20.15■□□□□ 0.82
NDE1-209ENST00000574109 CFAP65Q6ZU64 1925 aaKnown RBP20.14■□□□□ 0.81
NDE1-209ENST00000574109 MYO3AQ8NEV4 1616 aa20.14■□□□□ 0.81
NDE1-209ENST00000574109 ERVK-7P63135 1459 aa20.14■□□□□ 0.81
NDE1-209ENST00000574109 TRIM52Q96A61 297 aa20.12■□□□□ 0.81
NDE1-209ENST00000574109 KDM5AP29375 1690 aaKnown RBP20.11■□□□□ 0.81
NDE1-209ENST00000574109 TRPM2O94759 1503 aa20.09■□□□□ 0.81
NDE1-209ENST00000574109 NLRP1Q9C000 1473 aa20.08■□□□□ 0.81
NDE1-209ENST00000574109 PIK3C2BO00750 1634 aa20.08■□□□□ 0.8
NDE1-209ENST00000574109 NOS1P29475 1434 aa20.08■□□□□ 0.8
NDE1-209ENST00000574109 SYNMO15061 1565 aa20.08■□□□□ 0.8
NDE1-209ENST00000574109 SLC4A1APQ9BWU0 796 aaKnown RBP20.07■□□□□ 0.8
NDE1-209ENST00000574109 TNRQ92752 1358 aa20.06■□□□□ 0.8
NDE1-209ENST00000574109 PCGF6Q9BYE7 350 aa20.05■□□□□ 0.8
NDE1-209ENST00000574109 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
NDE1-209ENST00000574109 UHRF1BP1Q6BDS2 1440 aa20.04■□□□□ 0.8
NDE1-209ENST00000574109 PTPRTO14522 1441 aa20.03■□□□□ 0.8
NDE1-209ENST00000574109 KIF1BO60333 1816 aa20.03■□□□□ 0.8
NDE1-209ENST00000574109 MPHOSPH9Q99550 1183 aa20.01■□□□□ 0.79
NDE1-209ENST00000574109 A2ML1A8K2U0 1454 aa20■□□□□ 0.79
NDE1-209ENST00000574109 ADGRB3O60242 1522 aa20■□□□□ 0.79
NDE1-209ENST00000574109 UBR1Q8IWV7 1749 aa19.99■□□□□ 0.79
NDE1-209ENST00000574109 PKD2Q13563 968 aa19.99■□□□□ 0.79
NDE1-209ENST00000574109 CLTCL1P53675 1640 aa19.98■□□□□ 0.79
NDE1-209ENST00000574109 CEBPAP49715 358 aaPredicted RBP19.98■□□□□ 0.79
NDE1-209ENST00000574109 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
NDE1-209ENST00000574109 SLC52A1Q9NWF4 448 aa19.96■□□□□ 0.79
NDE1-209ENST00000574109 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
NDE1-209ENST00000574109 MYO5BQ9ULV0 1848 aa19.95■□□□□ 0.78
NDE1-209ENST00000574109 CCDC144AA2RUR9 1427 aa19.94■□□□□ 0.78
NDE1-209ENST00000574109 LMTK3Q96Q04 1460 aa19.94■□□□□ 0.78
NDE1-209ENST00000574109 FBXO31Q5XUX0 539 aaPredicted RBP19.94■□□□□ 0.78
NDE1-209ENST00000574109 TMEM131LA2VDJ0 1609 aa19.93■□□□□ 0.78
NDE1-209ENST00000574109 POLR1AO95602 1720 aaPredicted RBP19.93■□□□□ 0.78
NDE1-209ENST00000574109 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
NDE1-209ENST00000574109 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
NDE1-209ENST00000574109 DHX57Q6P158 1386 aaKnown RBP19.92■□□□□ 0.78
NDE1-209ENST00000574109 PLA2R1Q13018 1463 aa19.92■□□□□ 0.78
NDE1-209ENST00000574109 ANKRD30BQ9BXX2 1392 aa19.89■□□□□ 0.77
NDE1-209ENST00000574109 SLIT1O75093 1534 aa19.86■□□□□ 0.77
NDE1-209ENST00000574109 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
NDE1-209ENST00000574109 CLSPNQ9HAW4 1339 aa19.84■□□□□ 0.77
NDE1-209ENST00000574109 PPLO60437 1756 aa19.83■□□□□ 0.77
NDE1-209ENST00000574109 IDI1Q13907 227 aa19.83■□□□□ 0.77
NDE1-209ENST00000574109 FOXD1Q16676 465 aa19.83■□□□□ 0.77
NDE1-209ENST00000574109 ARHGAP23Q9P227 1491 aa19.83■□□□□ 0.76
NDE1-209ENST00000574109 THEMISQ8N1K5 641 aaPredicted RBP19.81■□□□□ 0.76
NDE1-209ENST00000574109 STAG3Q9UJ98 1225 aa19.81■□□□□ 0.76
NDE1-209ENST00000574109 SPATA31E1Q6ZUB1 1445 aa19.79■□□□□ 0.76
NDE1-209ENST00000574109 NEXMIFQ5QGS0 1516 aa19.78■□□□□ 0.76
NDE1-209ENST00000574109 TMEM2Q9UHN6 1383 aa19.78■□□□□ 0.76
NDE1-209ENST00000574109 SCAF11Q99590 1463 aaKnown RBP19.77■□□□□ 0.76
NDE1-209ENST00000574109 STRCQ7RTU9 1775 aa19.77■□□□□ 0.76
NDE1-209ENST00000574109 ZFYVE9O95405 1425 aa19.76■□□□□ 0.75
NDE1-209ENST00000574109 IQGAP1P46940 1657 aa19.76■□□□□ 0.75
NDE1-209ENST00000574109 RIMS2Q9UQ26 1411 aa19.74■□□□□ 0.75
NDE1-209ENST00000574109 RPGRIP1LQ68CZ1 1315 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms