RNA–Protein interactions for RNA: ENST00000573924.1

RPA1-205, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-205ENST00000573924 ATP7AQ04656 1500 aa11.64□□□□□ -0.55
RPA1-205ENST00000573924 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
RPA1-205ENST00000573924 NCKAP5LQ9HCH0 1330 aa11.63□□□□□ -0.55
RPA1-205ENST00000573924 HNRNPMP52272 730 aaKnown RBP eCLIP11.63□□□□□ -0.55
RPA1-205ENST00000573924 SYCP2Q9BX26 1530 aa11.63□□□□□ -0.55
RPA1-205ENST00000573924 ZNF335Q9H4Z2 1342 aaPredicted RBP11.62□□□□□ -0.55
RPA1-205ENST00000573924 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
RPA1-205ENST00000573924 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
RPA1-205ENST00000573924 LRRIQ1Q96JM4 1722 aa11.62□□□□□ -0.55
RPA1-205ENST00000573924 CEP170BQ9Y4F5 1589 aaPredicted RBP11.62□□□□□ -0.55
RPA1-205ENST00000573924 GPATCH8Q9UKJ3 1502 aaKnown RBP11.61□□□□□ -0.55
RPA1-205ENST00000573924 MYO3AQ8NEV4 1616 aa11.61□□□□□ -0.55
RPA1-205ENST00000573924 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
RPA1-205ENST00000573924 CLTCQ00610 1675 aaKnown RBP11.61□□□□□ -0.55
RPA1-205ENST00000573924 ADGBQ8N7X0 1667 aa11.6□□□□□ -0.55
RPA1-205ENST00000573924 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
RPA1-205ENST00000573924 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
RPA1-205ENST00000573924 PTPRKQ15262 1439 aa11.6□□□□□ -0.55
RPA1-205ENST00000573924 PLXNC1O60486 1568 aa11.59□□□□□ -0.55
RPA1-205ENST00000573924 A2ML1A8K2U0 1454 aa11.59□□□□□ -0.55
RPA1-205ENST00000573924 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
RPA1-205ENST00000573924 CPS1P31327 1500 aa11.59□□□□□ -0.55
RPA1-205ENST00000573924 FAM135AQ9P2D6 1515 aa11.59□□□□□ -0.55
RPA1-205ENST00000573924 INO80Q9ULG1 1556 aaPredicted RBP11.58□□□□□ -0.55
RPA1-205ENST00000573924 THEMISQ8N1K5 641 aaPredicted RBP11.58□□□□□ -0.56
RPA1-205ENST00000573924 RTEL1-TNFRSF6BF6WH68 1400 aa11.58□□□□□ -0.56
RPA1-205ENST00000573924 APLP2Q06481 763 aa11.57□□□□□ -0.56
RPA1-205ENST00000573924 ANKLE2Q86XL3 938 aa11.57□□□□□ -0.56
RPA1-205ENST00000573924 DHX29Q7Z478 1369 aaKnown RBP11.55□□□□□ -0.56
RPA1-205ENST00000573924 TNRQ92752 1358 aa11.55□□□□□ -0.56
RPA1-205ENST00000573924 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
RPA1-205ENST00000573924 WASHC2CQ9Y4E1 1318 aa11.55□□□□□ -0.56
RPA1-205ENST00000573924 PIP4K2BP78356 416 aa11.54□□□□□ -0.56
RPA1-205ENST00000573924 SHANK2Q9UPX8 1470 aa11.53□□□□□ -0.56
RPA1-205ENST00000573924 KIF3BO15066 747 aa11.53□□□□□ -0.56
RPA1-205ENST00000573924 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
RPA1-205ENST00000573924 POLR1AO95602 1720 aaPredicted RBP11.52□□□□□ -0.56
RPA1-205ENST00000573924 NLRP1Q9C000 1473 aa11.52□□□□□ -0.56
RPA1-205ENST00000573924 KDM5DQ9BY66 1539 aa11.52□□□□□ -0.57
RPA1-205ENST00000573924 TSPY4P0CV99 314 aa11.52□□□□□ -0.57
RPA1-205ENST00000573924 TSPY10P0CW01 314 aa11.52□□□□□ -0.57
RPA1-205ENST00000573924 HSPA1LP34931 641 aa11.52□□□□□ -0.57
RPA1-205ENST00000573924 PZPP20742 1482 aa11.51□□□□□ -0.57
RPA1-205ENST00000573924 EHBP1L1Q8N3D4 1523 aa11.51□□□□□ -0.57
RPA1-205ENST00000573924 CCDC141Q6ZP82 1450 aa11.5□□□□□ -0.57
RPA1-205ENST00000573924 FBXO3Q9UK99 471 aa11.49□□□□□ -0.57
RPA1-205ENST00000573924 CEP162Q5TB80 1403 aa11.49□□□□□ -0.57
RPA1-205ENST00000573924 MIA2Q96PC5 1412 aa11.49□□□□□ -0.57
RPA1-205ENST00000573924 MED1Q15648 1581 aaPredicted RBP11.49□□□□□ -0.57
RPA1-205ENST00000573924 NPHP4O75161 1426 aaPredicted RBP11.48□□□□□ -0.57
RPA1-205ENST00000573924 MBD5Q9P267 1494 aa11.48□□□□□ -0.57
RPA1-205ENST00000573924 UGGT1Q9NYU2 1555 aa11.48□□□□□ -0.57
RPA1-205ENST00000573924 DEPDC5O75140 1603 aa11.47□□□□□ -0.57
RPA1-205ENST00000573924 MED14O60244 1454 aa11.47□□□□□ -0.57
RPA1-205ENST00000573924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.47□□□□□ -0.57
RPA1-205ENST00000573924 TIAM1Q13009 1591 aa11.46□□□□□ -0.57
RPA1-205ENST00000573924 ZNF644Q9H582 1327 aaPredicted RBP11.46□□□□□ -0.57
RPA1-205ENST00000573924 FBXO31Q5XUX0 539 aaPredicted RBP11.46□□□□□ -0.57
RPA1-205ENST00000573924 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
RPA1-205ENST00000573924 NEURL4Q96JN8 1562 aa11.45□□□□□ -0.58
RPA1-205ENST00000573924 SYNMO15061 1565 aa11.43□□□□□ -0.58
RPA1-205ENST00000573924 CAMSAP2Q08AD1 1489 aa11.43□□□□□ -0.58
RPA1-205ENST00000573924 IQGAP1P46940 1657 aa11.43□□□□□ -0.58
RPA1-205ENST00000573924 ZC3H13Q5T200 1668 aaKnown RBP11.43□□□□□ -0.58
RPA1-205ENST00000573924 EID1Q9Y6B2 187 aa11.42□□□□□ -0.58
RPA1-205ENST00000573924 VWDEQ8N2E2 1590 aa11.41□□□□□ -0.58
RPA1-205ENST00000573924 RNF17Q9BXT8 1623 aaKnown RBP11.41□□□□□ -0.58
RPA1-205ENST00000573924 ARHGEF5Q12774 1597 aa11.41□□□□□ -0.58
RPA1-205ENST00000573924 NCOA2Q15596 1464 aa11.4□□□□□ -0.58
RPA1-205ENST00000573924 EIF2AK4Q9P2K8 1649 aaKnown RBP11.38□□□□□ -0.59
RPA1-205ENST00000573924 LRRC7Q96NW7 1537 aa11.38□□□□□ -0.59
RPA1-205ENST00000573924 STAG3Q9UJ98 1225 aa11.37□□□□□ -0.59
RPA1-205ENST00000573924 SCAF11Q99590 1463 aaKnown RBP11.37□□□□□ -0.59
RPA1-205ENST00000573924 ABCC3O15438 1527 aa11.36□□□□□ -0.59
RPA1-205ENST00000573924 TXNDC2Q86VQ3 553 aa11.36□□□□□ -0.59
RPA1-205ENST00000573924 ERVK-7P63135 1459 aa11.36□□□□□ -0.59
RPA1-205ENST00000573924 KANK1Q14678 1352 aa11.35□□□□□ -0.59
RPA1-205ENST00000573924 MAST1Q9Y2H9 1570 aa11.35□□□□□ -0.59
RPA1-205ENST00000573924 DUOX2Q9NRD8 1548 aa11.34□□□□□ -0.59
RPA1-205ENST00000573924 MYOM3Q5VTT5 1437 aa11.34□□□□□ -0.59
RPA1-205ENST00000573924 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
RPA1-205ENST00000573924 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
RPA1-205ENST00000573924 ARHGAP31Q2M1Z3 1444 aa11.33□□□□□ -0.6
RPA1-205ENST00000573924 FAM135BQ49AJ0 1406 aa11.33□□□□□ -0.6
RPA1-205ENST00000573924 SLIT1O75093 1534 aa11.32□□□□□ -0.6
RPA1-205ENST00000573924 HDGFP51858 240 aaKnown RBP11.31□□□□□ -0.6
RPA1-205ENST00000573924 UBR1Q8IWV7 1749 aa11.31□□□□□ -0.6
RPA1-205ENST00000573924 LRRC9Q6ZRR7 1453 aa11.31□□□□□ -0.6
RPA1-205ENST00000573924 ARHGAP23Q9P227 1491 aa11.31□□□□□ -0.6
RPA1-205ENST00000573924 ERBINQ96RT1 1412 aa11.3□□□□□ -0.6
RPA1-205ENST00000573924 ALKQ9UM73 1620 aa11.3□□□□□ -0.6
RPA1-205ENST00000573924 KCNA6P17658 529 aa11.29□□□□□ -0.6
RPA1-205ENST00000573924 TMEM2Q9UHN6 1383 aa11.28□□□□□ -0.6
RPA1-205ENST00000573924 KDM5AP29375 1690 aaKnown RBP11.28□□□□□ -0.6
RPA1-205ENST00000573924 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
RPA1-205ENST00000573924 PROM2Q8N271 834 aa11.28□□□□□ -0.6
RPA1-205ENST00000573924 BCANQ96GW7 911 aa11.28□□□□□ -0.6
RPA1-205ENST00000573924 MAP3K1Q13233 1512 aa11.28□□□□□ -0.6
RPA1-205ENST00000573924 MSH6P52701 1360 aa11.28□□□□□ -0.6
RPA1-205ENST00000573924 KIF15Q9NS87 1388 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms