RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
LITAF-212ENST00000573332 FAM135AQ9P2D6 1515 aa26.14■■□□□ 1.78
LITAF-212ENST00000573332 FER1L4A9Z1Z3 1794 aa26.14■■□□□ 1.78
LITAF-212ENST00000573332 RNF17Q9BXT8 1623 aaKnown RBP26.14■■□□□ 1.77
LITAF-212ENST00000573332 RIMS1Q86UR5 1692 aaKnown RBP26.12■■□□□ 1.77
LITAF-212ENST00000573332 MROH1Q8NDA8 1641 aa26.08■■□□□ 1.77
LITAF-212ENST00000573332 KDM5DQ9BY66 1539 aa26.07■■□□□ 1.76
LITAF-212ENST00000573332 WASHC2CQ9Y4E1 1318 aa26.07■■□□□ 1.76
LITAF-212ENST00000573332 ZMYM3Q14202 1370 aa26.07■■□□□ 1.76
LITAF-212ENST00000573332 HFM1A2PYH4 1435 aa26.05■■□□□ 1.76
LITAF-212ENST00000573332 NAIPQ13075 1403 aa26.05■■□□□ 1.76
LITAF-212ENST00000573332 PRDM15P57071 1507 aaPredicted RBP26.05■■□□□ 1.76
LITAF-212ENST00000573332 DEPDC5O75140 1603 aa26.05■■□□□ 1.76
LITAF-212ENST00000573332 MROH2AA6NES4 1674 aa26.05■■□□□ 1.76
LITAF-212ENST00000573332 CEBPAP49715 358 aaPredicted RBP26.03■■□□□ 1.76
LITAF-212ENST00000573332 CLTCQ00610 1675 aaKnown RBP26.01■■□□□ 1.75
LITAF-212ENST00000573332 KANK1Q14678 1352 aa26.01■■□□□ 1.75
LITAF-212ENST00000573332 ABCC3O15438 1527 aa26■■□□□ 1.75
LITAF-212ENST00000573332 VWDEQ8N2E2 1590 aa25.99■■□□□ 1.75
LITAF-212ENST00000573332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.99■■□□□ 1.75
LITAF-212ENST00000573332 ZC3H13Q5T200 1668 aaKnown RBP25.99■■□□□ 1.75
LITAF-212ENST00000573332 C3P01024 1663 aa25.97■■□□□ 1.75
LITAF-212ENST00000573332 LMTK2Q8IWU2 1503 aa25.96■■□□□ 1.75
LITAF-212ENST00000573332 GCC2Q8IWJ2 1684 aa25.96■■□□□ 1.75
LITAF-212ENST00000573332 NPATQ14207 1427 aa25.96■■□□□ 1.75
LITAF-212ENST00000573332 UNC13BO14795 1591 aa25.95■■□□□ 1.75
LITAF-212ENST00000573332 PZPP20742 1482 aa25.94■■□□□ 1.74
LITAF-212ENST00000573332 PLPPR3Q6T4P5 718 aa25.94■■□□□ 1.74
LITAF-212ENST00000573332 ARHGAP31Q2M1Z3 1444 aa25.94■■□□□ 1.74
LITAF-212ENST00000573332 NUP155O75694 1391 aa25.89■■□□□ 1.74
LITAF-212ENST00000573332 CEP152O94986 1710 aa25.88■■□□□ 1.73
LITAF-212ENST00000573332 FBXO31Q5XUX0 539 aaPredicted RBP25.87■■□□□ 1.73
LITAF-212ENST00000573332 CAMSAP1Q5T5Y3 1602 aa25.87■■□□□ 1.73
LITAF-212ENST00000573332 SETD5Q9C0A6 1442 aa25.87■■□□□ 1.73
LITAF-212ENST00000573332 ACIN1Q9UKV3 1341 aaKnown RBP25.87■■□□□ 1.73
LITAF-212ENST00000573332 SETD1BQ9UPS6 1966 aaKnown RBP25.84■■□□□ 1.73
LITAF-212ENST00000573332 IQGAP3Q86VI3 1631 aa25.84■■□□□ 1.73
LITAF-212ENST00000573332 EFCAB6Q5THR3 1501 aa25.83■■□□□ 1.72
LITAF-212ENST00000573332 TNRQ92752 1358 aa25.82■■□□□ 1.72
LITAF-212ENST00000573332 UHRF1BP1Q6BDS2 1440 aa25.81■■□□□ 1.72
LITAF-212ENST00000573332 RPRD2Q5VT52 1461 aaKnown RBP25.81■■□□□ 1.72
LITAF-212ENST00000573332 LMTK3Q96Q04 1460 aa25.81■■□□□ 1.72
LITAF-212ENST00000573332 SPATA31D1Q6ZQQ2 1576 aa25.81■■□□□ 1.72
LITAF-212ENST00000573332 ERVK-7P63135 1459 aa25.8■■□□□ 1.72
LITAF-212ENST00000573332 TET3O43151 1660 aa25.8■■□□□ 1.72
LITAF-212ENST00000573332 PREX1Q8TCU6 1659 aa25.78■■□□□ 1.72
LITAF-212ENST00000573332 HRCP23327 699 aa25.78■■□□□ 1.72
LITAF-212ENST00000573332 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
LITAF-212ENST00000573332 TRIM52Q96A61 297 aa25.77■■□□□ 1.72
LITAF-212ENST00000573332 RAB3GAP2Q9H2M9 1393 aa25.76■■□□□ 1.71
LITAF-212ENST00000573332 NOS1P29475 1434 aa25.75■■□□□ 1.71
LITAF-212ENST00000573332 NLRP1Q9C000 1473 aa25.74■■□□□ 1.71
LITAF-212ENST00000573332 MYO3AQ8NEV4 1616 aa25.71■■□□□ 1.71
LITAF-212ENST00000573332 A2ML1A8K2U0 1454 aa25.71■■□□□ 1.71
LITAF-212ENST00000573332 SLC4A1APQ9BWU0 796 aaKnown RBP25.69■■□□□ 1.7
LITAF-212ENST00000573332 E9PCH4 1651 aa25.68■■□□□ 1.7
LITAF-212ENST00000573332 CEP170BQ9Y4F5 1589 aaPredicted RBP25.68■■□□□ 1.7
LITAF-212ENST00000573332 SLC52A1Q9NWF4 448 aa25.67■■□□□ 1.7
LITAF-212ENST00000573332 ZNF142P52746 1687 aaPredicted RBP25.67■■□□□ 1.7
LITAF-212ENST00000573332 HSPA2P54652 639 aa25.66■■□□□ 1.7
LITAF-212ENST00000573332 PKD2Q13563 968 aa25.65■■□□□ 1.7
LITAF-212ENST00000573332 MPHOSPH9Q99550 1183 aa25.65■■□□□ 1.7
LITAF-212ENST00000573332 SYNMO15061 1565 aa25.65■■□□□ 1.7
LITAF-212ENST00000573332 PTPRTO14522 1441 aa25.64■■□□□ 1.7
LITAF-212ENST00000573332 IDI1Q13907 227 aa25.63■■□□□ 1.69
LITAF-212ENST00000573332 THEMISQ8N1K5 641 aaPredicted RBP25.61■■□□□ 1.69
LITAF-212ENST00000573332 CFAP65Q6ZU64 1925 aaKnown RBP25.61■■□□□ 1.69
LITAF-212ENST00000573332 UGGT1Q9NYU2 1555 aa25.6■■□□□ 1.69
LITAF-212ENST00000573332 PLA2R1Q13018 1463 aa25.58■■□□□ 1.69
LITAF-212ENST00000573332 PIK3C2BO00750 1634 aa25.55■■□□□ 1.68
LITAF-212ENST00000573332 TRPM2O94759 1503 aa25.53■■□□□ 1.68
LITAF-212ENST00000573332 KDM5AP29375 1690 aaKnown RBP25.52■■□□□ 1.68
LITAF-212ENST00000573332 SPHKAPQ2M3C7 1700 aa25.51■■□□□ 1.68
LITAF-212ENST00000573332 STAG3Q9UJ98 1225 aa25.51■■□□□ 1.67
LITAF-212ENST00000573332 UBR1Q8IWV7 1749 aa25.51■■□□□ 1.67
LITAF-212ENST00000573332 FOXD1Q16676 465 aa25.5■■□□□ 1.67
LITAF-212ENST00000573332 ADGRB3O60242 1522 aa25.49■■□□□ 1.67
LITAF-212ENST00000573332 ARHGAP23Q9P227 1491 aa25.47■■□□□ 1.67
LITAF-212ENST00000573332 ANKLE2Q86XL3 938 aa25.47■■□□□ 1.67
LITAF-212ENST00000573332 DMRT2Q9Y5R5 561 aa25.47■■□□□ 1.67
LITAF-212ENST00000573332 SLIT1O75093 1534 aa25.47■■□□□ 1.67
LITAF-212ENST00000573332 TMEM2Q9UHN6 1383 aa25.46■■□□□ 1.67
LITAF-212ENST00000573332 STRCQ7RTU9 1775 aa25.45■■□□□ 1.66
LITAF-212ENST00000573332 TMEM131LA2VDJ0 1609 aa25.45■■□□□ 1.66
LITAF-212ENST00000573332 NCKAP5LQ9HCH0 1330 aa25.44■■□□□ 1.66
LITAF-212ENST00000573332 CLTCL1P53675 1640 aa25.42■■□□□ 1.66
LITAF-212ENST00000573332 CHGAP10645 457 aaKnown RBP25.41■■□□□ 1.66
LITAF-212ENST00000573332 CCDC144AA2RUR9 1427 aa25.4■■□□□ 1.66
LITAF-212ENST00000573332 EID1Q9Y6B2 187 aa25.4■■□□□ 1.66
LITAF-212ENST00000573332 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
LITAF-212ENST00000573332 MED14O60244 1454 aa25.4■■□□□ 1.66
LITAF-212ENST00000573332 LTKP29376 864 aa25.39■■□□□ 1.66
LITAF-212ENST00000573332 TXNDC2Q86VQ3 553 aa25.39■■□□□ 1.66
LITAF-212ENST00000573332 HDGFP51858 240 aaKnown RBP25.38■■□□□ 1.65
LITAF-212ENST00000573332 SCAF11Q99590 1463 aaKnown RBP25.38■■□□□ 1.65
LITAF-212ENST00000573332 ZFYVE9O95405 1425 aa25.37■■□□□ 1.65
LITAF-212ENST00000573332 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
LITAF-212ENST00000573332 NEURL4Q96JN8 1562 aa25.35■■□□□ 1.65
LITAF-212ENST00000573332 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.35■■□□□ 1.65
LITAF-212ENST00000573332 RIMS2Q9UQ26 1411 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms