RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 HSPA2P54652 639 aa15.11■□□□□ 0.01
NPLOC4-210ENST00000572824 ATP10AO60312 1499 aa15.11■□□□□ 0.01
NPLOC4-210ENST00000572824 ZNF518AQ6AHZ1 1483 aa15.11■□□□□ 0.01
NPLOC4-210ENST00000572824 EFCAB2Q5VUJ9 269 aa15.1■□□□□ 0.01
NPLOC4-210ENST00000572824 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
NPLOC4-210ENST00000572824 SYCP2Q9BX26 1530 aa15.09■□□□□ 0.01
NPLOC4-210ENST00000572824 CHADLQ6NUI6 762 aa15.08■□□□□ 0
NPLOC4-210ENST00000572824 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
NPLOC4-210ENST00000572824 CDK11AQ9UQ88 783 aaPredicted RBP15.07■□□□□ 0
NPLOC4-210ENST00000572824 CEBPAP49715 358 aaPredicted RBP15.06■□□□□ 0
NPLOC4-210ENST00000572824 NUBP1P53384 320 aa15.06■□□□□ 0
NPLOC4-210ENST00000572824 C3P01024 1663 aa15.06■□□□□ 0
NPLOC4-210ENST00000572824 GPATCH8Q9UKJ3 1502 aaKnown RBP15.05■□□□□ -0
NPLOC4-210ENST00000572824 PREX1Q8TCU6 1659 aa15.05■□□□□ -0
NPLOC4-210ENST00000572824 TIAM1Q13009 1591 aa15.03■□□□□ -0
NPLOC4-210ENST00000572824 REREQ9P2R6 1566 aa15.03■□□□□ -0
NPLOC4-210ENST00000572824 SUPT6HQ7KZ85 1726 aaKnown RBP15.03■□□□□ -0
NPLOC4-210ENST00000572824 MLH3Q9UHC1 1453 aa15.02■□□□□ -0
NPLOC4-210ENST00000572824 PRKAR2AP13861 404 aaKnown RBP15.01□□□□□ -0.01
NPLOC4-210ENST00000572824 ZNF777Q9ULD5 760 aaPredicted RBP15.01□□□□□ -0.01
NPLOC4-210ENST00000572824 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
NPLOC4-210ENST00000572824 INO80Q9ULG1 1556 aaPredicted RBP15.01□□□□□ -0.01
NPLOC4-210ENST00000572824 STRCQ7RTU9 1775 aa15.01□□□□□ -0.01
NPLOC4-210ENST00000572824 CEP162Q5TB80 1403 aa15□□□□□ -0.01
NPLOC4-210ENST00000572824 MYT1LQ9UL68 1186 aa15□□□□□ -0.01
NPLOC4-210ENST00000572824 ATP7AQ04656 1500 aa14.97□□□□□ -0.01
NPLOC4-210ENST00000572824 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.01
NPLOC4-210ENST00000572824 PIP4P2Q8N4L2 257 aa14.97□□□□□ -0.01
NPLOC4-210ENST00000572824 AGLP35573 1532 aa14.97□□□□□ -0.01
NPLOC4-210ENST00000572824 EHBP1L1Q8N3D4 1523 aa14.97□□□□□ -0.01
NPLOC4-210ENST00000572824 ZNF644Q9H582 1327 aaPredicted RBP14.96□□□□□ -0.01
NPLOC4-210ENST00000572824 PLXNC1O60486 1568 aa14.96□□□□□ -0.01
NPLOC4-210ENST00000572824 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
NPLOC4-210ENST00000572824 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
NPLOC4-210ENST00000572824 CLTCQ00610 1675 aaKnown RBP14.95□□□□□ -0.02
NPLOC4-210ENST00000572824 ADGBQ8N7X0 1667 aa14.94□□□□□ -0.02
NPLOC4-210ENST00000572824 GSE1Q14687 1217 aa14.94□□□□□ -0.02
NPLOC4-210ENST00000572824 RASEFQ8IZ41 740 aa14.93□□□□□ -0.02
NPLOC4-210ENST00000572824 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
NPLOC4-210ENST00000572824 CCNB3Q8WWL7 1395 aa14.93□□□□□ -0.02
NPLOC4-210ENST00000572824 LOC105371045A0A1W2PR82 267 aa14.92□□□□□ -0.02
NPLOC4-210ENST00000572824 DCAF8Q5TAQ9 597 aa14.91□□□□□ -0.02
NPLOC4-210ENST00000572824 MROH2AA6NES4 1674 aa14.9□□□□□ -0.02
NPLOC4-210ENST00000572824 MBD5Q9P267 1494 aa14.89□□□□□ -0.03
NPLOC4-210ENST00000572824 SETD1BQ9UPS6 1966 aaKnown RBP14.89□□□□□ -0.03
NPLOC4-210ENST00000572824 FAM212AQ96EL1 285 aa14.89□□□□□ -0.03
NPLOC4-210ENST00000572824 CFDP1Q9UEE9 299 aaPredicted RBP14.89□□□□□ -0.03
NPLOC4-210ENST00000572824 SPAG9O60271 1321 aaKnown RBP14.89□□□□□ -0.03
NPLOC4-210ENST00000572824 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
NPLOC4-210ENST00000572824 UHRF1BP1Q6BDS2 1440 aa14.88□□□□□ -0.03
NPLOC4-210ENST00000572824 A2MP01023 1474 aa14.88□□□□□ -0.03
NPLOC4-210ENST00000572824 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
NPLOC4-210ENST00000572824 FBXO41Q8TF61 875 aa14.87□□□□□ -0.03
NPLOC4-210ENST00000572824 MYO3AQ8NEV4 1616 aa14.87□□□□□ -0.03
NPLOC4-210ENST00000572824 CAMSAP2Q08AD1 1489 aa14.87□□□□□ -0.03
NPLOC4-210ENST00000572824 PLEKHH2Q8IVE3 1493 aa14.85□□□□□ -0.03
NPLOC4-210ENST00000572824 RGL2O15211 777 aa14.83□□□□□ -0.04
NPLOC4-210ENST00000572824 ZNF142P52746 1687 aaPredicted RBP14.83□□□□□ -0.04
NPLOC4-210ENST00000572824 VPS8Q8N3P4 1428 aa14.82□□□□□ -0.04
NPLOC4-210ENST00000572824 CAMSAP1Q5T5Y3 1602 aa14.81□□□□□ -0.04
NPLOC4-210ENST00000572824 ZMYM3Q14202 1370 aa14.8□□□□□ -0.04
NPLOC4-210ENST00000572824 CNTLNQ9NXG0 1405 aa14.8□□□□□ -0.04
NPLOC4-210ENST00000572824 PTPRKQ15262 1439 aa14.79□□□□□ -0.04
NPLOC4-210ENST00000572824 NCOA1Q15788 1441 aa14.79□□□□□ -0.04
NPLOC4-210ENST00000572824 KANK4Q5T7N3 995 aaPredicted RBP14.79□□□□□ -0.04
NPLOC4-210ENST00000572824 CCDC141Q6ZP82 1450 aa14.79□□□□□ -0.04
NPLOC4-210ENST00000572824 LRRC9Q6ZRR7 1453 aa14.79□□□□□ -0.04
NPLOC4-210ENST00000572824 CEP170BQ9Y4F5 1589 aaPredicted RBP14.78□□□□□ -0.04
NPLOC4-210ENST00000572824 GGT6Q6P531 493 aa14.78□□□□□ -0.04
NPLOC4-210ENST00000572824 CERKQ8TCT0 537 aa14.78□□□□□ -0.04
NPLOC4-210ENST00000572824 LTBP4Q8N2S1 1624 aa14.77□□□□□ -0.04
NPLOC4-210ENST00000572824 ESF1Q9H501 851 aaKnown RBP14.77□□□□□ -0.05
NPLOC4-210ENST00000572824 ARHGEF5Q12774 1597 aa14.77□□□□□ -0.05
NPLOC4-210ENST00000572824 TSPYL2Q9H2G4 693 aaPredicted RBP14.76□□□□□ -0.05
NPLOC4-210ENST00000572824 NPATQ14207 1427 aa14.75□□□□□ -0.05
NPLOC4-210ENST00000572824 CHRM1P11229 460 aaPredicted RBP14.74□□□□□ -0.05
NPLOC4-210ENST00000572824 RTEL1-TNFRSF6BF6WH68 1400 aa14.74□□□□□ -0.05
NPLOC4-210ENST00000572824 NCKAP5LQ9HCH0 1330 aa14.73□□□□□ -0.05
NPLOC4-210ENST00000572824 CEP152O94986 1710 aa14.73□□□□□ -0.05
NPLOC4-210ENST00000572824 DNMT1P26358 1616 aaKnown RBP14.73□□□□□ -0.05
NPLOC4-210ENST00000572824 MROH1Q8NDA8 1641 aa14.73□□□□□ -0.05
NPLOC4-210ENST00000572824 PTPRTO14522 1441 aa14.72□□□□□ -0.05
NPLOC4-210ENST00000572824 DHX29Q7Z478 1369 aaKnown RBP14.72□□□□□ -0.05
NPLOC4-210ENST00000572824 KDM5DQ9BY66 1539 aa14.71□□□□□ -0.05
NPLOC4-210ENST00000572824 CROCC2H7BZ55 1655 aa14.71□□□□□ -0.05
NPLOC4-210ENST00000572824 RNF17Q9BXT8 1623 aaKnown RBP14.71□□□□□ -0.05
NPLOC4-210ENST00000572824 CFAP65Q6ZU64 1925 aaKnown RBP14.71□□□□□ -0.05
NPLOC4-210ENST00000572824 FBXO31Q5XUX0 539 aaPredicted RBP14.71□□□□□ -0.05
NPLOC4-210ENST00000572824 RNF25Q96BH1 459 aaPredicted RBP14.71□□□□□ -0.05
NPLOC4-210ENST00000572824 POLR1AO95602 1720 aaPredicted RBP14.7□□□□□ -0.06
NPLOC4-210ENST00000572824 NEURL4Q96JN8 1562 aa14.7□□□□□ -0.06
NPLOC4-210ENST00000572824 MAST1Q9Y2H9 1570 aa14.7□□□□□ -0.06
NPLOC4-210ENST00000572824 KIF3BO15066 747 aa14.69□□□□□ -0.06
NPLOC4-210ENST00000572824 PYGBP11216 843 aa14.69□□□□□ -0.06
NPLOC4-210ENST00000572824 TCOF1Q13428 1488 aaKnown RBP14.69□□□□□ -0.06
NPLOC4-210ENST00000572824 MYOM3Q5VTT5 1437 aa14.68□□□□□ -0.06
NPLOC4-210ENST00000572824 ZNF335Q9H4Z2 1342 aaPredicted RBP14.67□□□□□ -0.06
NPLOC4-210ENST00000572824 A2ML1A8K2U0 1454 aa14.67□□□□□ -0.06
NPLOC4-210ENST00000572824 PZPP20742 1482 aa14.67□□□□□ -0.06
NPLOC4-210ENST00000572824 ABCC3O15438 1527 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms