RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 MROH2AA6NES4 1674 aa31.65■■■□□ 2.66
CHMP6-204ENST00000572778 HSPA2P54652 639 aa31.65■■■□□ 2.66
CHMP6-204ENST00000572778 NCOA1Q15788 1441 aa31.65■■■□□ 2.66
CHMP6-204ENST00000572778 ITGAEP38570 1179 aa31.62■■■□□ 2.65
CHMP6-204ENST00000572778 ERBINQ96RT1 1412 aa31.62■■■□□ 2.65
CHMP6-204ENST00000572778 EIF2AK4Q9P2K8 1649 aaKnown RBP31.61■■■□□ 2.65
CHMP6-204ENST00000572778 UHRF1BP1Q6BDS2 1440 aa31.61■■■□□ 2.65
CHMP6-204ENST00000572778 KDM5DQ9BY66 1539 aa31.6■■■□□ 2.65
CHMP6-204ENST00000572778 ADGRL2O95490 1459 aa31.59■■■□□ 2.65
CHMP6-204ENST00000572778 NPATQ14207 1427 aa31.58■■■□□ 2.65
CHMP6-204ENST00000572778 PTPRKQ15262 1439 aa31.58■■■□□ 2.65
CHMP6-204ENST00000572778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.57■■■□□ 2.64
CHMP6-204ENST00000572778 FAM135AQ9P2D6 1515 aa31.57■■■□□ 2.64
CHMP6-204ENST00000572778 PREX1Q8TCU6 1659 aa31.57■■■□□ 2.64
CHMP6-204ENST00000572778 RNF17Q9BXT8 1623 aaKnown RBP31.57■■■□□ 2.64
CHMP6-204ENST00000572778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.56■■■□□ 2.64
CHMP6-204ENST00000572778 RRBP1Q9P2E9 1410 aaKnown RBP31.51■■■□□ 2.64
CHMP6-204ENST00000572778 FBXO31Q5XUX0 539 aaPredicted RBP31.51■■■□□ 2.63
CHMP6-204ENST00000572778 SETD1BQ9UPS6 1966 aaKnown RBP31.5■■■□□ 2.63
CHMP6-204ENST00000572778 MROH1Q8NDA8 1641 aa31.49■■■□□ 2.63
CHMP6-204ENST00000572778 ABCC3O15438 1527 aa31.49■■■□□ 2.63
CHMP6-204ENST00000572778 ANKRD50Q9ULJ7 1429 aa31.47■■■□□ 2.63
CHMP6-204ENST00000572778 PZPP20742 1482 aa31.46■■■□□ 2.63
CHMP6-204ENST00000572778 ROCK1Q13464 1354 aa31.46■■■□□ 2.63
CHMP6-204ENST00000572778 KANK1Q14678 1352 aa31.46■■■□□ 2.63
CHMP6-204ENST00000572778 PRDM15P57071 1507 aaPredicted RBP31.43■■■□□ 2.62
CHMP6-204ENST00000572778 ZC3H13Q5T200 1668 aaKnown RBP31.42■■■□□ 2.62
CHMP6-204ENST00000572778 TNRQ92752 1358 aa31.42■■■□□ 2.62
CHMP6-204ENST00000572778 DEPDC5O75140 1603 aa31.38■■■□□ 2.61
CHMP6-204ENST00000572778 CEP152O94986 1710 aa31.37■■■□□ 2.61
CHMP6-204ENST00000572778 MYO3AQ8NEV4 1616 aa31.35■■■□□ 2.61
CHMP6-204ENST00000572778 CAMSAP1Q5T5Y3 1602 aa31.34■■■□□ 2.61
CHMP6-204ENST00000572778 CEP170BQ9Y4F5 1589 aaPredicted RBP31.32■■■□□ 2.6
CHMP6-204ENST00000572778 A2ML1A8K2U0 1454 aa31.3■■■□□ 2.6
CHMP6-204ENST00000572778 ARHGAP31Q2M1Z3 1444 aa31.3■■■□□ 2.6
CHMP6-204ENST00000572778 ERVK-7P63135 1459 aa31.29■■■□□ 2.6
CHMP6-204ENST00000572778 VWDEQ8N2E2 1590 aa31.29■■■□□ 2.6
CHMP6-204ENST00000572778 DMRT2Q9Y5R5 561 aa31.27■■■□□ 2.6
CHMP6-204ENST00000572778 LMTK2Q8IWU2 1503 aa31.27■■■□□ 2.6
CHMP6-204ENST00000572778 SPATA31D1Q6ZQQ2 1576 aa31.26■■■□□ 2.6
CHMP6-204ENST00000572778 ZNF142P52746 1687 aaPredicted RBP31.26■■■□□ 2.6
CHMP6-204ENST00000572778 NLRP1Q9C000 1473 aa31.25■■■□□ 2.59
CHMP6-204ENST00000572778 NCKAP5LQ9HCH0 1330 aa31.22■■■□□ 2.59
CHMP6-204ENST00000572778 STRCQ7RTU9 1775 aa31.21■■■□□ 2.59
CHMP6-204ENST00000572778 NUP155O75694 1391 aa31.19■■■□□ 2.58
CHMP6-204ENST00000572778 UNC13BO14795 1591 aa31.19■■■□□ 2.58
CHMP6-204ENST00000572778 THEMISQ8N1K5 641 aaPredicted RBP31.19■■■□□ 2.58
CHMP6-204ENST00000572778 EFCAB6Q5THR3 1501 aa31.18■■■□□ 2.58
CHMP6-204ENST00000572778 NAIPQ13075 1403 aa31.17■■■□□ 2.58
CHMP6-204ENST00000572778 PLA2R1Q13018 1463 aa31.17■■■□□ 2.58
CHMP6-204ENST00000572778 PKD2Q13563 968 aa31.16■■■□□ 2.58
CHMP6-204ENST00000572778 UGGT1Q9NYU2 1555 aa31.16■■■□□ 2.58
CHMP6-204ENST00000572778 CFAP65Q6ZU64 1925 aaKnown RBP31.14■■■□□ 2.58
CHMP6-204ENST00000572778 PTPRTO14522 1441 aa31.14■■■□□ 2.58
CHMP6-204ENST00000572778 HFM1A2PYH4 1435 aa31.11■■■□□ 2.57
CHMP6-204ENST00000572778 RPRD2Q5VT52 1461 aaKnown RBP31.09■■■□□ 2.57
CHMP6-204ENST00000572778 ANKLE2Q86XL3 938 aa31.09■■■□□ 2.57
CHMP6-204ENST00000572778 TET3O43151 1660 aa31.09■■■□□ 2.57
CHMP6-204ENST00000572778 NOS1P29475 1434 aa31.08■■■□□ 2.57
CHMP6-204ENST00000572778 STAG3Q9UJ98 1225 aa31.08■■■□□ 2.57
CHMP6-204ENST00000572778 IQGAP3Q86VI3 1631 aa31.07■■■□□ 2.56
CHMP6-204ENST00000572778 IDI1Q13907 227 aa31.07■■■□□ 2.56
CHMP6-204ENST00000572778 GCC2Q8IWJ2 1684 aa31.05■■■□□ 2.56
CHMP6-204ENST00000572778 TRIM52Q96A61 297 aa31.04■■■□□ 2.56
CHMP6-204ENST00000572778 SLC52A1Q9NWF4 448 aa31.03■■■□□ 2.56
CHMP6-204ENST00000572778 SYNMO15061 1565 aa31.03■■■□□ 2.56
CHMP6-204ENST00000572778 UBR1Q8IWV7 1749 aa30.98■■■□□ 2.55
CHMP6-204ENST00000572778 PIK3C2BO00750 1634 aa30.98■■■□□ 2.55
CHMP6-204ENST00000572778 E9PCH4 1651 aa30.97■■■□□ 2.55
CHMP6-204ENST00000572778 TXNDC2Q86VQ3 553 aa30.94■■■□□ 2.54
CHMP6-204ENST00000572778 CERKQ8TCT0 537 aa30.94■■■□□ 2.54
CHMP6-204ENST00000572778 NEURL4Q96JN8 1562 aa30.92■■■□□ 2.54
CHMP6-204ENST00000572778 NPHP4O75161 1426 aaPredicted RBP30.92■■■□□ 2.54
CHMP6-204ENST00000572778 EID1Q9Y6B2 187 aa30.92■■■□□ 2.54
CHMP6-204ENST00000572778 POLR1AO95602 1720 aaPredicted RBP30.92■■■□□ 2.54
CHMP6-204ENST00000572778 CHGAP10645 457 aaKnown RBP30.91■■■□□ 2.54
CHMP6-204ENST00000572778 TMEM2Q9UHN6 1383 aa30.91■■■□□ 2.54
CHMP6-204ENST00000572778 LTKP29376 864 aa30.9■■■□□ 2.54
CHMP6-204ENST00000572778 ZNF335Q9H4Z2 1342 aaPredicted RBP30.9■■■□□ 2.54
CHMP6-204ENST00000572778 ARHGAP23Q9P227 1491 aa30.89■■■□□ 2.54
CHMP6-204ENST00000572778 SLC4A1APQ9BWU0 796 aaKnown RBP30.89■■■□□ 2.54
CHMP6-204ENST00000572778 MED14O60244 1454 aa30.89■■■□□ 2.53
CHMP6-204ENST00000572778 SLIT1O75093 1534 aa30.88■■■□□ 2.53
CHMP6-204ENST00000572778 SCAF11Q99590 1463 aaKnown RBP30.88■■■□□ 2.53
CHMP6-204ENST00000572778 ADGRB3O60242 1522 aa30.88■■■□□ 2.53
CHMP6-204ENST00000572778 ILDR1Q86SU0 546 aaPredicted RBP30.86■■■□□ 2.53
CHMP6-204ENST00000572778 SETD5Q9C0A6 1442 aa30.85■■■□□ 2.53
CHMP6-204ENST00000572778 KDM5AP29375 1690 aaKnown RBP30.84■■■□□ 2.53
CHMP6-204ENST00000572778 LTBP4Q8N2S1 1624 aa30.82■■■□□ 2.52
CHMP6-204ENST00000572778 FBXO41Q8TF61 875 aa30.81■■■□□ 2.52
CHMP6-204ENST00000572778 IQGAP1P46940 1657 aa30.78■■■□□ 2.52
CHMP6-204ENST00000572778 HDGFP51858 240 aaKnown RBP30.76■■■□□ 2.51
CHMP6-204ENST00000572778 TMEM131LA2VDJ0 1609 aa30.76■■■□□ 2.51
CHMP6-204ENST00000572778 SPHKAPQ2M3C7 1700 aa30.75■■■□□ 2.51
CHMP6-204ENST00000572778 ACIN1Q9UKV3 1341 aaKnown RBP30.74■■■□□ 2.51
CHMP6-204ENST00000572778 RIMS2Q9UQ26 1411 aa30.74■■■□□ 2.51
CHMP6-204ENST00000572778 PPP1R15AO75807 674 aaPredicted RBP30.74■■■□□ 2.51
CHMP6-204ENST00000572778 BCANQ96GW7 911 aa30.74■■■□□ 2.51
CHMP6-204ENST00000572778 MPHOSPH9Q99550 1183 aa30.74■■■□□ 2.51
CHMP6-204ENST00000572778 RAB3GAP2Q9H2M9 1393 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms