RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 SIN3AQ96ST3 1273 aa25.07■■□□□ 1.6
RPAIN-208ENST00000571043 DIEXFQ68CQ4 756 aaKnown RBP25.05■■□□□ 1.6
RPAIN-208ENST00000571043 EIF2AK4Q9P2K8 1649 aaKnown RBP25.05■■□□□ 1.6
RPAIN-208ENST00000571043 KIF3BO15066 747 aa25.04■■□□□ 1.6
RPAIN-208ENST00000571043 BCORL1Q5H9F3 1711 aa25.03■■□□□ 1.6
RPAIN-208ENST00000571043 AGLP35573 1532 aa25.02■■□□□ 1.6
RPAIN-208ENST00000571043 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
RPAIN-208ENST00000571043 NEUROD1Q13562 356 aa25.02■■□□□ 1.6
RPAIN-208ENST00000571043 SIGLEC1Q9BZZ2 1709 aa25■■□□□ 1.59
RPAIN-208ENST00000571043 MPHOSPH9Q99550 1183 aa24.97■■□□□ 1.59
RPAIN-208ENST00000571043 DEPDC5O75140 1603 aa24.95■■□□□ 1.59
RPAIN-208ENST00000571043 RNF17Q9BXT8 1623 aaKnown RBP24.95■■□□□ 1.58
RPAIN-208ENST00000571043 UNC13BO14795 1591 aa24.94■■□□□ 1.58
RPAIN-208ENST00000571043 GGT6Q6P531 493 aa24.94■■□□□ 1.58
RPAIN-208ENST00000571043 NUP155O75694 1391 aa24.92■■□□□ 1.58
RPAIN-208ENST00000571043 ARID4BQ4LE39 1312 aaPredicted RBP24.92■■□□□ 1.58
RPAIN-208ENST00000571043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.92■■□□□ 1.582e-6■□□□□ 10.3
RPAIN-208ENST00000571043 PPP1R15AO75807 674 aaPredicted RBP24.91■■□□□ 1.58
RPAIN-208ENST00000571043 TONSLQ96HA7 1378 aa24.91■■□□□ 1.58
RPAIN-208ENST00000571043 MROH1Q8NDA8 1641 aa24.91■■□□□ 1.58
RPAIN-208ENST00000571043 PPP6R1Q9UPN7 881 aa24.9■■□□□ 1.58
RPAIN-208ENST00000571043 PRDM15P57071 1507 aaPredicted RBP24.89■■□□□ 1.58
RPAIN-208ENST00000571043 KDM5DQ9BY66 1539 aa24.88■■□□□ 1.57
RPAIN-208ENST00000571043 VWDEQ8N2E2 1590 aa24.87■■□□□ 1.57
RPAIN-208ENST00000571043 KANK1Q14678 1352 aa24.87■■□□□ 1.57
RPAIN-208ENST00000571043 IQGAP3Q86VI3 1631 aa24.86■■□□□ 1.57
RPAIN-208ENST00000571043 MLECQ14165 292 aa24.85■■□□□ 1.57
RPAIN-208ENST00000571043 PZPP20742 1482 aa24.84■■□□□ 1.57
RPAIN-208ENST00000571043 SLC4A1APQ9BWU0 796 aaKnown RBP24.83■■□□□ 1.57
RPAIN-208ENST00000571043 FAM135AQ9P2D6 1515 aa24.83■■□□□ 1.57
RPAIN-208ENST00000571043 WASHC2CQ9Y4E1 1318 aa24.83■■□□□ 1.57
RPAIN-208ENST00000571043 ANKRD30BQ9BXX2 1392 aa24.82■■□□□ 1.56
RPAIN-208ENST00000571043 LMTK2Q8IWU2 1503 aa24.79■■□□□ 1.56
RPAIN-208ENST00000571043 CEP152O94986 1710 aa24.78■■□□□ 1.56
RPAIN-208ENST00000571043 ABCC3O15438 1527 aa24.78■■□□□ 1.56
RPAIN-208ENST00000571043 ZC3H13Q5T200 1668 aaKnown RBP24.77■■□□□ 1.56
RPAIN-208ENST00000571043 TET3O43151 1660 aa24.76■■□□□ 1.55
RPAIN-208ENST00000571043 PKD2Q13563 968 aa24.76■■□□□ 1.55
RPAIN-208ENST00000571043 ESF1Q9H501 851 aaKnown RBP24.73■■□□□ 1.55
RPAIN-208ENST00000571043 CLTCQ00610 1675 aaKnown RBP24.72■■□□□ 1.55
RPAIN-208ENST00000571043 FOXD1Q16676 465 aa24.72■■□□□ 1.55
RPAIN-208ENST00000571043 RPRD2Q5VT52 1461 aaKnown RBP24.72■■□□□ 1.55
RPAIN-208ENST00000571043 CNTLNQ9NXG0 1405 aa24.71■■□□□ 1.55
RPAIN-208ENST00000571043 ADAMTSL3P82987 1691 aa24.71■■□□□ 1.55
RPAIN-208ENST00000571043 CFAP65Q6ZU64 1925 aaKnown RBP24.7■■□□□ 1.55
RPAIN-208ENST00000571043 E9PCH4 1651 aa24.7■■□□□ 1.54
RPAIN-208ENST00000571043 CAMSAP1Q5T5Y3 1602 aa24.7■■□□□ 1.54
RPAIN-208ENST00000571043 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
RPAIN-208ENST00000571043 FER1L4A9Z1Z3 1794 aa24.69■■□□□ 1.54
RPAIN-208ENST00000571043 ARHGAP31Q2M1Z3 1444 aa24.69■■□□□ 1.54
RPAIN-208ENST00000571043 ZMYM3Q14202 1370 aa24.67■■□□□ 1.54
RPAIN-208ENST00000571043 NPATQ14207 1427 aa24.66■■□□□ 1.54
RPAIN-208ENST00000571043 MROH2AA6NES4 1674 aa24.66■■□□□ 1.54
RPAIN-208ENST00000571043 MADDQ8WXG6 1647 aa24.65■■□□□ 1.54
RPAIN-208ENST00000571043 L3MBTL2Q969R5 705 aa24.62■■□□□ 1.53
RPAIN-208ENST00000571043 PTPRTO14522 1441 aa24.6■■□□□ 1.53
RPAIN-208ENST00000571043 RIMS1Q86UR5 1692 aaKnown RBP24.59■■□□□ 1.53
RPAIN-208ENST00000571043 PLA2R1Q13018 1463 aa24.59■■□□□ 1.53
RPAIN-208ENST00000571043 FBXO31Q5XUX0 539 aaPredicted RBP24.58■■□□□ 1.53
RPAIN-208ENST00000571043 MIER1Q8N108 512 aa24.58■■□□□ 1.53
RPAIN-208ENST00000571043 C3P01024 1663 aa24.57■■□□□ 1.52
RPAIN-208ENST00000571043 SPHKAPQ2M3C7 1700 aa24.57■■□□□ 1.52
RPAIN-208ENST00000571043 NOS1P29475 1434 aa24.57■■□□□ 1.52
RPAIN-208ENST00000571043 CEBPAP49715 358 aaPredicted RBP24.56■■□□□ 1.52
RPAIN-208ENST00000571043 PREX1Q8TCU6 1659 aa24.55■■□□□ 1.52
RPAIN-208ENST00000571043 KDM4FA0A1W2PPD8 638 aa24.55■■□□□ 1.52
RPAIN-208ENST00000571043 ERVK-7P63135 1459 aa24.53■■□□□ 1.52
RPAIN-208ENST00000571043 SPATA31D1Q6ZQQ2 1576 aa24.52■■□□□ 1.52
RPAIN-208ENST00000571043 TRPM2O94759 1503 aa24.51■■□□□ 1.51
RPAIN-208ENST00000571043 SETD1BQ9UPS6 1966 aaKnown RBP24.5■■□□□ 1.51
RPAIN-208ENST00000571043 PTPRMP28827 1452 aa24.5■■□□□ 1.51
RPAIN-208ENST00000571043 SYNMO15061 1565 aa24.48■■□□□ 1.51
RPAIN-208ENST00000571043 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
RPAIN-208ENST00000571043 CCDC144AA2RUR9 1427 aa24.48■■□□□ 1.51
RPAIN-208ENST00000571043 IDI1Q13907 227 aa24.45■■□□□ 1.5
RPAIN-208ENST00000571043 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.5
RPAIN-208ENST00000571043 TNRQ92752 1358 aa24.44■■□□□ 1.5
RPAIN-208ENST00000571043 PIK3C2BO00750 1634 aa24.44■■□□□ 1.5
RPAIN-208ENST00000571043 CLTCL1P53675 1640 aa24.44■■□□□ 1.5
RPAIN-208ENST00000571043 NBPF8Q3BBV2 869 aa24.43■■□□□ 1.5
RPAIN-208ENST00000571043 UGGT1Q9NYU2 1555 aa24.43■■□□□ 1.5
RPAIN-208ENST00000571043 EIF4G2P78344 907 aaKnown RBP eCLIP24.41■■□□□ 1.5
RPAIN-208ENST00000571043 KIF1BO60333 1816 aa24.4■■□□□ 1.5
RPAIN-208ENST00000571043 HIRIP3Q9BW71 556 aaPredicted RBP24.4■■□□□ 1.5
RPAIN-208ENST00000571043 HSPA5P11021 654 aaKnown RBP24.39■■□□□ 1.49
RPAIN-208ENST00000571043 UHRF1BP1Q6BDS2 1440 aa24.38■■□□□ 1.49
RPAIN-208ENST00000571043 DDX10Q13206 875 aaKnown RBP24.36■■□□□ 1.49
RPAIN-208ENST00000571043 NLRP1Q9C000 1473 aa24.36■■□□□ 1.49
RPAIN-208ENST00000571043 SPATA31E1Q6ZUB1 1445 aa24.35■■□□□ 1.49
RPAIN-208ENST00000571043 NEURL4Q96JN8 1562 aa24.34■■□□□ 1.49
RPAIN-208ENST00000571043 CENPBP07199 599 aaPredicted RBP24.32■■□□□ 1.48
RPAIN-208ENST00000571043 TMEM131LA2VDJ0 1609 aa24.32■■□□□ 1.48
RPAIN-208ENST00000571043 CHGAP10645 457 aaKnown RBP24.31■■□□□ 1.48
RPAIN-208ENST00000571043 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
RPAIN-208ENST00000571043 MYO5BQ9ULV0 1848 aa24.3■■□□□ 1.48
RPAIN-208ENST00000571043 KDM5AP29375 1690 aaKnown RBP24.3■■□□□ 1.48
RPAIN-208ENST00000571043 MYO3AQ8NEV4 1616 aa24.3■■□□□ 1.48
RPAIN-208ENST00000571043 ADGRB3O60242 1522 aa24.29■■□□□ 1.48
RPAIN-208ENST00000571043 STAG3Q9UJ98 1225 aa24.29■■□□□ 1.48
RPAIN-208ENST00000571043 A2ML1A8K2U0 1454 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms