RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TNRQ92752 1358 aa20.97■□□□□ 0.95
CCDC40-205ENST00000571028 ADGBQ8N7X0 1667 aa20.96■□□□□ 0.95
CCDC40-205ENST00000571028 ANKLE2Q86XL3 938 aa20.96■□□□□ 0.95
CCDC40-205ENST00000571028 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
CCDC40-205ENST00000571028 POLR1AO95602 1720 aaPredicted RBP20.93■□□□□ 0.94
CCDC40-205ENST00000571028 FBXO31Q5XUX0 539 aaPredicted RBP20.92■□□□□ 0.94
CCDC40-205ENST00000571028 THEMISQ8N1K5 641 aaPredicted RBP20.92■□□□□ 0.94
CCDC40-205ENST00000571028 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
CCDC40-205ENST00000571028 VPS8Q8N3P4 1428 aa20.92■□□□□ 0.94
CCDC40-205ENST00000571028 NEURL4Q96JN8 1562 aa20.92■□□□□ 0.94
CCDC40-205ENST00000571028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCDC40-205ENST00000571028 DHX29Q7Z478 1369 aaKnown RBP20.9■□□□□ 0.94
CCDC40-205ENST00000571028 KIF3BO15066 747 aa20.9■□□□□ 0.94
CCDC40-205ENST00000571028 PZPP20742 1482 aa20.89■□□□□ 0.94
CCDC40-205ENST00000571028 RTEL1-TNFRSF6BF6WH68 1400 aa20.89■□□□□ 0.94
CCDC40-205ENST00000571028 WASHC2CQ9Y4E1 1318 aa20.89■□□□□ 0.93
CCDC40-205ENST00000571028 KDM5DQ9BY66 1539 aa20.88■□□□□ 0.93
CCDC40-205ENST00000571028 ZNF644Q9H582 1327 aaPredicted RBP20.88■□□□□ 0.93
CCDC40-205ENST00000571028 FAM135AQ9P2D6 1515 aa20.88■□□□□ 0.93
CCDC40-205ENST00000571028 NPHP4O75161 1426 aaPredicted RBP20.87■□□□□ 0.93
CCDC40-205ENST00000571028 VWDEQ8N2E2 1590 aa20.86■□□□□ 0.93
CCDC40-205ENST00000571028 NLRP1Q9C000 1473 aa20.86■□□□□ 0.93
CCDC40-205ENST00000571028 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
CCDC40-205ENST00000571028 MBD5Q9P267 1494 aa20.84■□□□□ 0.93
CCDC40-205ENST00000571028 MIA2Q96PC5 1412 aa20.84■□□□□ 0.93
CCDC40-205ENST00000571028 APLP2Q06481 763 aa20.82■□□□□ 0.92
CCDC40-205ENST00000571028 MED14O60244 1454 aa20.81■□□□□ 0.92
CCDC40-205ENST00000571028 TIAM1Q13009 1591 aa20.81■□□□□ 0.92
CCDC40-205ENST00000571028 DEPDC5O75140 1603 aa20.8■□□□□ 0.92
CCDC40-205ENST00000571028 CCDC141Q6ZP82 1450 aa20.8■□□□□ 0.92
CCDC40-205ENST00000571028 EHBP1L1Q8N3D4 1523 aa20.78■□□□□ 0.92
CCDC40-205ENST00000571028 IQGAP1P46940 1657 aa20.77■□□□□ 0.92
CCDC40-205ENST00000571028 RNF17Q9BXT8 1623 aaKnown RBP20.77■□□□□ 0.92
CCDC40-205ENST00000571028 ALKQ9UM73 1620 aa20.77■□□□□ 0.92
CCDC40-205ENST00000571028 RSPH4AQ5TD94 716 aa20.76■□□□□ 0.91
CCDC40-205ENST00000571028 LRRC7Q96NW7 1537 aa20.76■□□□□ 0.91
CCDC40-205ENST00000571028 SYNMO15061 1565 aa20.75■□□□□ 0.91
CCDC40-205ENST00000571028 TSPY4P0CV99 314 aa20.72■□□□□ 0.91
CCDC40-205ENST00000571028 TSPY10P0CW01 314 aa20.72■□□□□ 0.91
CCDC40-205ENST00000571028 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
CCDC40-205ENST00000571028 KANK4Q5T7N3 995 aaPredicted RBP20.7■□□□□ 0.9
CCDC40-205ENST00000571028 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
CCDC40-205ENST00000571028 ERVK-7P63135 1459 aa20.65■□□□□ 0.9
CCDC40-205ENST00000571028 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
CCDC40-205ENST00000571028 RGS17Q9UGC6 210 aaPredicted RBP20.65■□□□□ 0.9
CCDC40-205ENST00000571028 STRCP1A6NGW2 1772 aa20.64■□□□□ 0.9
CCDC40-205ENST00000571028 ABCC3O15438 1527 aa20.64■□□□□ 0.9
CCDC40-205ENST00000571028 NCOA2Q15596 1464 aa20.64■□□□□ 0.89
CCDC40-205ENST00000571028 ZC3H13Q5T200 1668 aaKnown RBP20.63■□□□□ 0.89
CCDC40-205ENST00000571028 LRRC9Q6ZRR7 1453 aa20.62■□□□□ 0.89
CCDC40-205ENST00000571028 TXNDC2Q86VQ3 553 aa20.62■□□□□ 0.89
CCDC40-205ENST00000571028 EID1Q9Y6B2 187 aa20.62■□□□□ 0.89
CCDC40-205ENST00000571028 ARHGEF5Q12774 1597 aa20.61■□□□□ 0.89
CCDC40-205ENST00000571028 MAP3K1Q13233 1512 aa20.61■□□□□ 0.89
CCDC40-205ENST00000571028 LTKP29376 864 aa20.57■□□□□ 0.88
CCDC40-205ENST00000571028 FAM135BQ49AJ0 1406 aa20.57■□□□□ 0.88
CCDC40-205ENST00000571028 POTEAQ6S8J7 498 aa20.56■□□□□ 0.88
CCDC40-205ENST00000571028 STAG3Q9UJ98 1225 aa20.56■□□□□ 0.88
CCDC40-205ENST00000571028 UBR1Q8IWV7 1749 aa20.56■□□□□ 0.88
CCDC40-205ENST00000571028 EIF2AK4Q9P2K8 1649 aaKnown RBP20.54■□□□□ 0.88
CCDC40-205ENST00000571028 SLIT1O75093 1534 aa20.53■□□□□ 0.88
CCDC40-205ENST00000571028 ARHGAP23Q9P227 1491 aa20.53■□□□□ 0.88
CCDC40-205ENST00000571028 TMEM94Q12767 1356 aa20.51■□□□□ 0.87
CCDC40-205ENST00000571028 MAST1Q9Y2H9 1570 aa20.51■□□□□ 0.87
CCDC40-205ENST00000571028 CEP152O94986 1710 aa20.49■□□□□ 0.87
CCDC40-205ENST00000571028 TMEM2Q9UHN6 1383 aa20.48■□□□□ 0.87
CCDC40-205ENST00000571028 PROSER2Q86WR7 435 aaPredicted RBP20.48■□□□□ 0.87
CCDC40-205ENST00000571028 MROH1Q8NDA8 1641 aa20.48■□□□□ 0.87
CCDC40-205ENST00000571028 DUOX2Q9NRD8 1548 aa20.47■□□□□ 0.87
CCDC40-205ENST00000571028 ARHGAP31Q2M1Z3 1444 aa20.45■□□□□ 0.86
CCDC40-205ENST00000571028 ROBO1Q9Y6N7 1651 aa20.45■□□□□ 0.86
CCDC40-205ENST00000571028 KCNA6P17658 529 aa20.45■□□□□ 0.86
CCDC40-205ENST00000571028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCDC40-205ENST00000571028 XIRP1Q702N8 1843 aaKnown RBP20.45■□□□□ 0.86
CCDC40-205ENST00000571028 BCANQ96GW7 911 aa20.44■□□□□ 0.86
CCDC40-205ENST00000571028 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
CCDC40-205ENST00000571028 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
CCDC40-205ENST00000571028 MSH6P52701 1360 aa20.43■□□□□ 0.86
CCDC40-205ENST00000571028 KANK1Q14678 1352 aa20.43■□□□□ 0.86
CCDC40-205ENST00000571028 KIF15Q9NS87 1388 aa20.42■□□□□ 0.86
CCDC40-205ENST00000571028 PRDM15P57071 1507 aaPredicted RBP20.42■□□□□ 0.86
CCDC40-205ENST00000571028 PIK3C2BO00750 1634 aa20.42■□□□□ 0.86
CCDC40-205ENST00000571028 JCADQ9P266 1359 aa20.41■□□□□ 0.86
CCDC40-205ENST00000571028 MYOM3Q5VTT5 1437 aa20.41■□□□□ 0.86
CCDC40-205ENST00000571028 EFCAB6Q5THR3 1501 aa20.41■□□□□ 0.86
CCDC40-205ENST00000571028 CFAP65Q6ZU64 1925 aaKnown RBP20.41■□□□□ 0.86
CCDC40-205ENST00000571028 NKTRP30414 1462 aaKnown RBP20.39■□□□□ 0.85
CCDC40-205ENST00000571028 ERBINQ96RT1 1412 aa20.39■□□□□ 0.85
CCDC40-205ENST00000571028 MEX3CQ5U5Q3 659 aaKnown RBP20.38■□□□□ 0.85
CCDC40-205ENST00000571028 RRP7BPQ9NSQ0 103 aa20.38■□□□□ 0.85
CCDC40-205ENST00000571028 SETD1AO15047 1707 aaKnown RBP20.38■□□□□ 0.85
CCDC40-205ENST00000571028 SLAIN2Q9P270 581 aa20.37■□□□□ 0.85
CCDC40-205ENST00000571028 IDI1Q13907 227 aa20.35■□□□□ 0.85
CCDC40-205ENST00000571028 PHLPP1O60346 1717 aa20.34■□□□□ 0.85
CCDC40-205ENST00000571028 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
CCDC40-205ENST00000571028 ZNF772Q68DY9 489 aaPredicted RBP20.33■□□□□ 0.85
CCDC40-205ENST00000571028 KDM5AP29375 1690 aaKnown RBP20.32■□□□□ 0.84
CCDC40-205ENST00000571028 TRIM52Q96A61 297 aa20.32■□□□□ 0.84
CCDC40-205ENST00000571028 FGD6Q6ZV73 1430 aa20.32■□□□□ 0.84
CCDC40-205ENST00000571028 TET3O43151 1660 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms