RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 SETD1BQ9UPS6 1966 aaKnown RBP28.2■■■□□ 2.1
SPNS2-203ENST00000570979 RSPH4AQ5TD94 716 aa28.19■■■□□ 2.1
SPNS2-203ENST00000570979 NAIPQ13075 1403 aa28.19■■■□□ 2.1
SPNS2-203ENST00000570979 GGT6Q6P531 493 aa28.19■■■□□ 2.1
SPNS2-203ENST00000570979 DHX29Q7Z478 1369 aaKnown RBP28.18■■■□□ 2.1
SPNS2-203ENST00000570979 PTPRKQ15262 1439 aa28.17■■■□□ 2.1
SPNS2-203ENST00000570979 ZMYM3Q14202 1370 aa28.15■■■□□ 2.1
SPNS2-203ENST00000570979 CLTCQ00610 1675 aaKnown RBP28.15■■■□□ 2.1
SPNS2-203ENST00000570979 SCAF1Q9H7N4 1312 aaKnown RBP28.15■■■□□ 2.1
SPNS2-203ENST00000570979 UHRF1BP1Q6BDS2 1440 aa28.14■■■□□ 2.1
SPNS2-203ENST00000570979 MROH2AA6NES4 1674 aa28.14■■■□□ 2.1
SPNS2-203ENST00000570979 ILDR1Q86SU0 546 aaPredicted RBP28.14■■■□□ 2.09
SPNS2-203ENST00000570979 GCC2Q8IWJ2 1684 aa28.13■■■□□ 2.09
SPNS2-203ENST00000570979 ROCK1Q13464 1354 aa28.11■■■□□ 2.09
SPNS2-203ENST00000570979 TSPY4P0CV99 314 aa28.11■■■□□ 2.09
SPNS2-203ENST00000570979 TSPY10P0CW01 314 aa28.11■■■□□ 2.09
SPNS2-203ENST00000570979 KIF3BO15066 747 aa28.09■■■□□ 2.09
SPNS2-203ENST00000570979 MAST1Q9Y2H9 1570 aa28.06■■■□□ 2.08
SPNS2-203ENST00000570979 NPATQ14207 1427 aa28.05■■■□□ 2.08
SPNS2-203ENST00000570979 PPP6R1Q9UPN7 881 aa28.05■■■□□ 2.08
SPNS2-203ENST00000570979 STRCQ7RTU9 1775 aa28.04■■■□□ 2.08
SPNS2-203ENST00000570979 DNMT1P26358 1616 aaKnown RBP28.03■■■□□ 2.08
SPNS2-203ENST00000570979 CENPBP07199 599 aaPredicted RBP28.03■■■□□ 2.08
SPNS2-203ENST00000570979 DAPK1P53355 1430 aa28.02■■■□□ 2.08
SPNS2-203ENST00000570979 ABCC5O15440 1437 aa27.98■■■□□ 2.07
SPNS2-203ENST00000570979 NEUROD1Q13562 356 aa27.97■■■□□ 2.07
SPNS2-203ENST00000570979 RRP7BPQ9NSQ0 103 aa27.95■■■□□ 2.06
SPNS2-203ENST00000570979 TONSLQ96HA7 1378 aa27.95■■■□□ 2.06
SPNS2-203ENST00000570979 KDM5DQ9BY66 1539 aa27.94■■■□□ 2.06
SPNS2-203ENST00000570979 SIN3AQ96ST3 1273 aa27.94■■■□□ 2.06
SPNS2-203ENST00000570979 CHIC2Q9UKJ5 165 aa27.94■■■□□ 2.06
SPNS2-203ENST00000570979 CROCC2H7BZ55 1655 aa27.93■■■□□ 2.06
SPNS2-203ENST00000570979 MYO3AQ8NEV4 1616 aa27.93■■■□□ 2.06
SPNS2-203ENST00000570979 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
SPNS2-203ENST00000570979 WASHC2CQ9Y4E1 1318 aa27.92■■■□□ 2.06
SPNS2-203ENST00000570979 FBXO31Q5XUX0 539 aaPredicted RBP27.91■■■□□ 2.06
SPNS2-203ENST00000570979 RNF17Q9BXT8 1623 aaKnown RBP27.91■■■□□ 2.06
SPNS2-203ENST00000570979 SHANK2Q9UPX8 1470 aa27.9■■■□□ 2.06
SPNS2-203ENST00000570979 FAM135AQ9P2D6 1515 aa27.9■■■□□ 2.06
SPNS2-203ENST00000570979 NCOA1Q15788 1441 aa27.89■■■□□ 2.06
SPNS2-203ENST00000570979 CAMSAP1Q5T5Y3 1602 aa27.88■■■□□ 2.05
SPNS2-203ENST00000570979 DUOX2Q9NRD8 1548 aa27.88■■■□□ 2.05
SPNS2-203ENST00000570979 TRIM52Q96A61 297 aa27.88■■■□□ 2.05
SPNS2-203ENST00000570979 EIF2AK4Q9P2K8 1649 aaKnown RBP27.88■■■□□ 2.05
SPNS2-203ENST00000570979 ZNF142P52746 1687 aaPredicted RBP27.87■■■□□ 2.05
SPNS2-203ENST00000570979 PZPP20742 1482 aa27.87■■■□□ 2.05
SPNS2-203ENST00000570979 KIF15Q9NS87 1388 aa27.87■■■□□ 2.05
SPNS2-203ENST00000570979 CEP170BQ9Y4F5 1589 aaPredicted RBP27.87■■■□□ 2.05
SPNS2-203ENST00000570979 MROH1Q8NDA8 1641 aa27.86■■■□□ 2.05
SPNS2-203ENST00000570979 DMRT2Q9Y5R5 561 aa27.86■■■□□ 2.05
SPNS2-203ENST00000570979 FBXO41Q8TF61 875 aa27.85■■■□□ 2.05
SPNS2-203ENST00000570979 ABCC3O15438 1527 aa27.84■■■□□ 2.05
SPNS2-203ENST00000570979 ADGRL2O95490 1459 aa27.84■■■□□ 2.05
SPNS2-203ENST00000570979 PTPRTO14522 1441 aa27.83■■■□□ 2.05
SPNS2-203ENST00000570979 TNRQ92752 1358 aa27.83■■■□□ 2.05
SPNS2-203ENST00000570979 MIER1Q8N108 512 aa27.83■■■□□ 2.05
SPNS2-203ENST00000570979 NCKAP5LQ9HCH0 1330 aa27.81■■■□□ 2.04
SPNS2-203ENST00000570979 ANKRD30AQ9BXX3 1397 aa27.81■■■□□ 2.04
SPNS2-203ENST00000570979 MPHOSPH9Q99550 1183 aa27.8■■■□□ 2.04
SPNS2-203ENST00000570979 A2ML1A8K2U0 1454 aa27.8■■■□□ 2.04
SPNS2-203ENST00000570979 CERKQ8TCT0 537 aa27.79■■■□□ 2.04
SPNS2-203ENST00000570979 CEP152O94986 1710 aa27.77■■■□□ 2.04
SPNS2-203ENST00000570979 ERBINQ96RT1 1412 aa27.77■■■□□ 2.04
SPNS2-203ENST00000570979 ZC3H13Q5T200 1668 aaKnown RBP27.77■■■□□ 2.04
SPNS2-203ENST00000570979 PLA2R1Q13018 1463 aa27.75■■■□□ 2.03
SPNS2-203ENST00000570979 PRDM15P57071 1507 aaPredicted RBP27.72■■■□□ 2.03
SPNS2-203ENST00000570979 CFAP65Q6ZU64 1925 aaKnown RBP27.71■■■□□ 2.03
SPNS2-203ENST00000570979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.71■■■□□ 2.03
SPNS2-203ENST00000570979 PKD2Q13563 968 aa27.7■■■□□ 2.02
SPNS2-203ENST00000570979 SPATA31D1Q6ZQQ2 1576 aa27.69■■■□□ 2.02
SPNS2-203ENST00000570979 DEPDC5O75140 1603 aa27.69■■■□□ 2.02
SPNS2-203ENST00000570979 ERVK-7P63135 1459 aa27.69■■■□□ 2.02
SPNS2-203ENST00000570979 NLRP1Q9C000 1473 aa27.67■■■□□ 2.02
SPNS2-203ENST00000570979 LTBP4Q8N2S1 1624 aa27.67■■■□□ 2.02
SPNS2-203ENST00000570979 SLC4A1APQ9BWU0 796 aaKnown RBP27.63■■■□□ 2.01
SPNS2-203ENST00000570979 UGGT1Q9NYU2 1555 aa27.63■■■□□ 2.01
SPNS2-203ENST00000570979 ANKRD30BQ9BXX2 1392 aa27.62■■■□□ 2.01
SPNS2-203ENST00000570979 ARHGAP31Q2M1Z3 1444 aa27.61■■■□□ 2.01
SPNS2-203ENST00000570979 ZNF335Q9H4Z2 1342 aaPredicted RBP27.61■■■□□ 2.01
SPNS2-203ENST00000570979 VWDEQ8N2E2 1590 aa27.6■■■□□ 2.01
SPNS2-203ENST00000570979 NEURL4Q96JN8 1562 aa27.6■■■□□ 2.01
SPNS2-203ENST00000570979 ANKRD50Q9ULJ7 1429 aa27.6■■■□□ 2.01
SPNS2-203ENST00000570979 THEMISQ8N1K5 641 aaPredicted RBP27.59■■■□□ 2.01
SPNS2-203ENST00000570979 KANK1Q14678 1352 aa27.58■■■□□ 2.01
SPNS2-203ENST00000570979 POLR1AO95602 1720 aaPredicted RBP27.58■■■□□ 2.01
SPNS2-203ENST00000570979 RPRD2Q5VT52 1461 aaKnown RBP27.58■■■□□ 2.01
SPNS2-203ENST00000570979 LMTK2Q8IWU2 1503 aa27.56■■■□□ 2
SPNS2-203ENST00000570979 ANKLE2Q86XL3 938 aa27.54■■■□□ 2
SPNS2-203ENST00000570979 UBR1Q8IWV7 1749 aa27.51■■□□□ 1.99
SPNS2-203ENST00000570979 EFCAB6Q5THR3 1501 aa27.48■■□□□ 1.99
SPNS2-203ENST00000570979 MED14O60244 1454 aa27.47■■□□□ 1.99
SPNS2-203ENST00000570979 NPHP4O75161 1426 aaPredicted RBP27.46■■□□□ 1.99
SPNS2-203ENST00000570979 PIK3C2BO00750 1634 aa27.45■■□□□ 1.98
SPNS2-203ENST00000570979 L3MBTL2Q969R5 705 aa27.45■■□□□ 1.98
SPNS2-203ENST00000570979 SYNMO15061 1565 aa27.45■■□□□ 1.98
SPNS2-203ENST00000570979 YTHDC1Q96MU7 727 aaKnown RBP27.43■■□□□ 1.98
SPNS2-203ENST00000570979 IQSEC2Q5JU85 1478 aa27.43■■□□□ 1.98
SPNS2-203ENST00000570979 NOS1P29475 1434 aa27.43■■□□□ 1.98
SPNS2-203ENST00000570979 EIF4G2P78344 907 aaKnown RBP eCLIP27.43■■□□□ 1.98
SPNS2-203ENST00000570979 DDX10Q13206 875 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms