RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
LITAF-204ENST00000570798 FAM50AQ14320 339 aaKnown RBP27.85■■■□□ 2.05
LITAF-204ENST00000570798 NPATQ14207 1427 aa27.84■■■□□ 2.05
LITAF-204ENST00000570798 KDM5DQ9BY66 1539 aa27.83■■■□□ 2.05
LITAF-204ENST00000570798 RRP7BPQ9NSQ0 103 aa27.82■■■□□ 2.04
LITAF-204ENST00000570798 ADGRL2O95490 1459 aa27.82■■■□□ 2.04
LITAF-204ENST00000570798 MROH1Q8NDA8 1641 aa27.81■■■□□ 2.04
LITAF-204ENST00000570798 CHIC2Q9UKJ5 165 aa27.81■■■□□ 2.04
LITAF-204ENST00000570798 ANKRD30AQ9BXX3 1397 aa27.81■■■□□ 2.04
LITAF-204ENST00000570798 NCOA1Q15788 1441 aa27.81■■■□□ 2.04
LITAF-204ENST00000570798 UHRF1BP1Q6BDS2 1440 aa27.81■■■□□ 2.04
LITAF-204ENST00000570798 ERBINQ96RT1 1412 aa27.81■■■□□ 2.04
LITAF-204ENST00000570798 HSPA2P54652 639 aa27.8■■■□□ 2.04
LITAF-204ENST00000570798 PTPRKQ15262 1439 aa27.8■■■□□ 2.04
LITAF-204ENST00000570798 ZC3H13Q5T200 1668 aaKnown RBP27.78■■■□□ 2.04
LITAF-204ENST00000570798 WASHC2CQ9Y4E1 1318 aa27.77■■■□□ 2.04
LITAF-204ENST00000570798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.75■■■□□ 2.03
LITAF-204ENST00000570798 DEPDC5O75140 1603 aa27.74■■■□□ 2.03
LITAF-204ENST00000570798 ABCC3O15438 1527 aa27.74■■■□□ 2.03
LITAF-204ENST00000570798 PZPP20742 1482 aa27.73■■■□□ 2.03
LITAF-204ENST00000570798 CEP152O94986 1710 aa27.72■■■□□ 2.03
LITAF-204ENST00000570798 PRDM15P57071 1507 aaPredicted RBP27.72■■■□□ 2.03
LITAF-204ENST00000570798 MYO3AQ8NEV4 1616 aa27.71■■■□□ 2.03
LITAF-204ENST00000570798 ZNF142P52746 1687 aaPredicted RBP27.69■■■□□ 2.02
LITAF-204ENST00000570798 STRCQ7RTU9 1775 aa27.68■■■□□ 2.02
LITAF-204ENST00000570798 RRBP1Q9P2E9 1410 aaKnown RBP27.67■■■□□ 2.02
LITAF-204ENST00000570798 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
LITAF-204ENST00000570798 FBXO31Q5XUX0 539 aaPredicted RBP27.66■■■□□ 2.02
LITAF-204ENST00000570798 ROCK1Q13464 1354 aa27.64■■■□□ 2.02
LITAF-204ENST00000570798 ANKRD50Q9ULJ7 1429 aa27.63■■■□□ 2.01
LITAF-204ENST00000570798 CEP170BQ9Y4F5 1589 aaPredicted RBP27.63■■■□□ 2.01
LITAF-204ENST00000570798 VWDEQ8N2E2 1590 aa27.62■■■□□ 2.01
LITAF-204ENST00000570798 CFAP65Q6ZU64 1925 aaKnown RBP27.61■■■□□ 2.01
LITAF-204ENST00000570798 TNRQ92752 1358 aa27.6■■■□□ 2.01
LITAF-204ENST00000570798 SPATA31D1Q6ZQQ2 1576 aa27.6■■■□□ 2.01
LITAF-204ENST00000570798 ARHGAP31Q2M1Z3 1444 aa27.58■■■□□ 2
LITAF-204ENST00000570798 A2ML1A8K2U0 1454 aa27.57■■■□□ 2
LITAF-204ENST00000570798 LMTK2Q8IWU2 1503 aa27.57■■■□□ 2
LITAF-204ENST00000570798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.57■■■□□ 2
LITAF-204ENST00000570798 KANK1Q14678 1352 aa27.57■■■□□ 2
LITAF-204ENST00000570798 ITGAEP38570 1179 aa27.56■■■□□ 2
LITAF-204ENST00000570798 ERVK-7P63135 1459 aa27.55■■■□□ 2
LITAF-204ENST00000570798 NLRP1Q9C000 1473 aa27.52■■■□□ 2
LITAF-204ENST00000570798 UNC13BO14795 1591 aa27.52■■■□□ 2
LITAF-204ENST00000570798 PLA2R1Q13018 1463 aa27.51■■■□□ 2
LITAF-204ENST00000570798 DMRT2Q9Y5R5 561 aa27.5■■□□□ 1.99
LITAF-204ENST00000570798 PTPRTO14522 1441 aa27.48■■□□□ 1.99
LITAF-204ENST00000570798 EFCAB6Q5THR3 1501 aa27.46■■□□□ 1.99
LITAF-204ENST00000570798 UGGT1Q9NYU2 1555 aa27.44■■□□□ 1.98
LITAF-204ENST00000570798 TET3O43151 1660 aa27.44■■□□□ 1.98
LITAF-204ENST00000570798 GCC2Q8IWJ2 1684 aa27.43■■□□□ 1.98
LITAF-204ENST00000570798 NCKAP5LQ9HCH0 1330 aa27.41■■□□□ 1.98
LITAF-204ENST00000570798 PKD2Q13563 968 aa27.41■■□□□ 1.98
LITAF-204ENST00000570798 IQGAP3Q86VI3 1631 aa27.41■■□□□ 1.98
LITAF-204ENST00000570798 POLR1AO95602 1720 aaPredicted RBP27.4■■□□□ 1.98
LITAF-204ENST00000570798 UBR1Q8IWV7 1749 aa27.4■■□□□ 1.98
LITAF-204ENST00000570798 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
LITAF-204ENST00000570798 THEMISQ8N1K5 641 aaPredicted RBP27.38■■□□□ 1.97
LITAF-204ENST00000570798 NOS1P29475 1434 aa27.38■■□□□ 1.97
LITAF-204ENST00000570798 NAIPQ13075 1403 aa27.37■■□□□ 1.97
LITAF-204ENST00000570798 SYNMO15061 1565 aa27.36■■□□□ 1.97
LITAF-204ENST00000570798 PIK3C2BO00750 1634 aa27.34■■□□□ 1.97
LITAF-204ENST00000570798 E9PCH4 1651 aa27.34■■□□□ 1.97
LITAF-204ENST00000570798 NEURL4Q96JN8 1562 aa27.34■■□□□ 1.97
LITAF-204ENST00000570798 KDM5AP29375 1690 aaKnown RBP27.33■■□□□ 1.97
LITAF-204ENST00000570798 NUP155O75694 1391 aa27.32■■□□□ 1.96
LITAF-204ENST00000570798 HFM1A2PYH4 1435 aa27.32■■□□□ 1.96
LITAF-204ENST00000570798 IDI1Q13907 227 aa27.28■■□□□ 1.96
LITAF-204ENST00000570798 ANKLE2Q86XL3 938 aa27.28■■□□□ 1.96
LITAF-204ENST00000570798 MED14O60244 1454 aa27.26■■□□□ 1.95
LITAF-204ENST00000570798 LTBP4Q8N2S1 1624 aa27.26■■□□□ 1.95
LITAF-204ENST00000570798 SLIT1O75093 1534 aa27.26■■□□□ 1.95
LITAF-204ENST00000570798 ARHGAP23Q9P227 1491 aa27.25■■□□□ 1.95
LITAF-204ENST00000570798 CERKQ8TCT0 537 aa27.24■■□□□ 1.95
LITAF-204ENST00000570798 SLC52A1Q9NWF4 448 aa27.24■■□□□ 1.95
LITAF-204ENST00000570798 ILDR1Q86SU0 546 aaPredicted RBP27.22■■□□□ 1.95
LITAF-204ENST00000570798 ADGRB3O60242 1522 aa27.21■■□□□ 1.95
LITAF-204ENST00000570798 IQGAP1P46940 1657 aa27.21■■□□□ 1.95
LITAF-204ENST00000570798 NPHP4O75161 1426 aaPredicted RBP27.2■■□□□ 1.94
LITAF-204ENST00000570798 MYO5BQ9ULV0 1848 aa27.2■■□□□ 1.94
LITAF-204ENST00000570798 SCAF11Q99590 1463 aaKnown RBP27.18■■□□□ 1.94
LITAF-204ENST00000570798 TMEM2Q9UHN6 1383 aa27.17■■□□□ 1.94
LITAF-204ENST00000570798 ZNF335Q9H4Z2 1342 aaPredicted RBP27.16■■□□□ 1.94
LITAF-204ENST00000570798 SPHKAPQ2M3C7 1700 aa27.16■■□□□ 1.94
LITAF-204ENST00000570798 FBXO41Q8TF61 875 aa27.16■■□□□ 1.94
LITAF-204ENST00000570798 STAG3Q9UJ98 1225 aa27.16■■□□□ 1.94
LITAF-204ENST00000570798 TMEM131LA2VDJ0 1609 aa27.16■■□□□ 1.94
LITAF-204ENST00000570798 LTKP29376 864 aa27.15■■□□□ 1.94
LITAF-204ENST00000570798 TXNDC2Q86VQ3 553 aa27.13■■□□□ 1.93
LITAF-204ENST00000570798 EID1Q9Y6B2 187 aa27.1■■□□□ 1.93
LITAF-204ENST00000570798 TRIM52Q96A61 297 aa27.09■■□□□ 1.93
LITAF-204ENST00000570798 IQSEC2Q5JU85 1478 aa27.08■■□□□ 1.93
LITAF-204ENST00000570798 ZFYVE9O95405 1425 aa27.05■■□□□ 1.92
LITAF-204ENST00000570798 STRCP1A6NGW2 1772 aa27.04■■□□□ 1.92
LITAF-204ENST00000570798 TRPM2O94759 1503 aa27.03■■□□□ 1.92
LITAF-204ENST00000570798 CPS1P31327 1500 aa27.03■■□□□ 1.92
LITAF-204ENST00000570798 SETD5Q9C0A6 1442 aa27.01■■□□□ 1.91
LITAF-204ENST00000570798 SLC4A1APQ9BWU0 796 aaKnown RBP27.01■■□□□ 1.91
LITAF-204ENST00000570798 CLTCL1P53675 1640 aa27.01■■□□□ 1.91
LITAF-204ENST00000570798 RIMS2Q9UQ26 1411 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms