RNA–Protein interactions for RNA: ENST00000570626.1

RBFOX1-221, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-221ENST00000570626 LRRIQ1Q96JM4 1722 aa16.42■□□□□ 0.22
RBFOX1-221ENST00000570626 SYCP2Q9BX26 1530 aa16.42■□□□□ 0.22
RBFOX1-221ENST00000570626 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
RBFOX1-221ENST00000570626 SPAG9O60271 1321 aaKnown RBP16.42■□□□□ 0.22
RBFOX1-221ENST00000570626 CDC42BPAQ5VT25 1732 aa16.42■□□□□ 0.22
RBFOX1-221ENST00000570626 FBXO31Q5XUX0 539 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-221ENST00000570626 ZC3H13Q5T200 1668 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-221ENST00000570626 UGGT1Q9NYU2 1555 aa16.4■□□□□ 0.22
RBFOX1-221ENST00000570626 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
RBFOX1-221ENST00000570626 ROBO1Q9Y6N7 1651 aa16.39■□□□□ 0.21
RBFOX1-221ENST00000570626 PZPP20742 1482 aa16.38■□□□□ 0.21
RBFOX1-221ENST00000570626 THEMISQ8N1K5 641 aaPredicted RBP16.38■□□□□ 0.21
RBFOX1-221ENST00000570626 TRIM52Q96A61 297 aa16.38■□□□□ 0.21
RBFOX1-221ENST00000570626 FAM135AQ9P2D6 1515 aa16.38■□□□□ 0.21
RBFOX1-221ENST00000570626 NLRP1Q9C000 1473 aa16.36■□□□□ 0.21
RBFOX1-221ENST00000570626 FOXD1Q16676 465 aa16.36■□□□□ 0.21
RBFOX1-221ENST00000570626 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
RBFOX1-221ENST00000570626 ADGBQ8N7X0 1667 aa16.35■□□□□ 0.21
RBFOX1-221ENST00000570626 HNRNPMP52272 730 aaKnown RBP eCLIP16.32■□□□□ 0.2
RBFOX1-221ENST00000570626 MIA2Q96PC5 1412 aa16.32■□□□□ 0.2
RBFOX1-221ENST00000570626 LRP6O75581 1613 aa16.31■□□□□ 0.2
RBFOX1-221ENST00000570626 KDM5DQ9BY66 1539 aa16.31■□□□□ 0.2
RBFOX1-221ENST00000570626 ZNF777Q9ULD5 760 aaPredicted RBP16.31■□□□□ 0.2
RBFOX1-221ENST00000570626 PHLPP1O60346 1717 aa16.3■□□□□ 0.2
RBFOX1-221ENST00000570626 JCADQ9P266 1359 aa16.28■□□□□ 0.2
RBFOX1-221ENST00000570626 CDK12Q9NYV4 1490 aaPredicted RBP16.26■□□□□ 0.19
RBFOX1-221ENST00000570626 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
RBFOX1-221ENST00000570626 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
RBFOX1-221ENST00000570626 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
RBFOX1-221ENST00000570626 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
RBFOX1-221ENST00000570626 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
RBFOX1-221ENST00000570626 GPATCH8Q9UKJ3 1502 aaKnown RBP16.24■□□□□ 0.19
RBFOX1-221ENST00000570626 COL16A1Q07092 1604 aaPredicted RBP16.23■□□□□ 0.19
RBFOX1-221ENST00000570626 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
RBFOX1-221ENST00000570626 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
RBFOX1-221ENST00000570626 SETBP1Q9Y6X0 1596 aa16.22■□□□□ 0.19
RBFOX1-221ENST00000570626 RXRBP28702 533 aa16.22■□□□□ 0.19
RBFOX1-221ENST00000570626 PLEKHH2Q8IVE3 1493 aa16.22■□□□□ 0.19
RBFOX1-221ENST00000570626 UBR1Q8IWV7 1749 aa16.21■□□□□ 0.19
RBFOX1-221ENST00000570626 MEX3CQ5U5Q3 659 aaKnown RBP16.2■□□□□ 0.18
RBFOX1-221ENST00000570626 DHX29Q7Z478 1369 aaKnown RBP16.2■□□□□ 0.18
RBFOX1-221ENST00000570626 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
RBFOX1-221ENST00000570626 CCDC18Q5T9S5 1454 aa16.18■□□□□ 0.18
RBFOX1-221ENST00000570626 SPATA31A6Q5VVP1 1343 aa16.18■□□□□ 0.18
RBFOX1-221ENST00000570626 KIF3BO15066 747 aa16.17■□□□□ 0.18
RBFOX1-221ENST00000570626 RGS12O14924 1447 aa16.17■□□□□ 0.18
RBFOX1-221ENST00000570626 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
RBFOX1-221ENST00000570626 ARHGAP23Q9P227 1491 aa16.16■□□□□ 0.18
RBFOX1-221ENST00000570626 LTKP29376 864 aa16.16■□□□□ 0.18
RBFOX1-221ENST00000570626 SLIT1O75093 1534 aa16.15■□□□□ 0.18
RBFOX1-221ENST00000570626 SHPRHQ149N8 1683 aa16.15■□□□□ 0.18
RBFOX1-221ENST00000570626 TIAM1Q13009 1591 aa16.15■□□□□ 0.18
RBFOX1-221ENST00000570626 EEA1Q15075 1411 aa16.15■□□□□ 0.18
RBFOX1-221ENST00000570626 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-221ENST00000570626 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
RBFOX1-221ENST00000570626 ERVK-7P63135 1459 aa16.14■□□□□ 0.17
RBFOX1-221ENST00000570626 RTEL1-TNFRSF6BF6WH68 1400 aa16.13■□□□□ 0.17
RBFOX1-221ENST00000570626 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
RBFOX1-221ENST00000570626 CFDP1Q9UEE9 299 aaPredicted RBP16.12■□□□□ 0.17
RBFOX1-221ENST00000570626 PRDM15P57071 1507 aaPredicted RBP16.12■□□□□ 0.17
RBFOX1-221ENST00000570626 TXNDC2Q86VQ3 553 aa16.11■□□□□ 0.17
RBFOX1-221ENST00000570626 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
RBFOX1-221ENST00000570626 SLAIN2Q9P270 581 aa16.1■□□□□ 0.17
RBFOX1-221ENST00000570626 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
RBFOX1-221ENST00000570626 PROSER2Q86WR7 435 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-221ENST00000570626 ABCC3O15438 1527 aa16.09■□□□□ 0.17
RBFOX1-221ENST00000570626 MSH6P52701 1360 aa16.08■□□□□ 0.16
RBFOX1-221ENST00000570626 NWD1Q149M9 1564 aa16.08■□□□□ 0.16
RBFOX1-221ENST00000570626 NUTM2BA6NNL0 878 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-221ENST00000570626 NUTM2EB1AL46 878 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-221ENST00000570626 KCNA6P17658 529 aa16.07■□□□□ 0.16
RBFOX1-221ENST00000570626 NUTM2DQ5VT03 806 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-221ENST00000570626 NUTM2AQ8IVF1 878 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-221ENST00000570626 AFF2P51816 1311 aa16.07■□□□□ 0.16
RBFOX1-221ENST00000570626 ZNF644Q9H582 1327 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-221ENST00000570626 NKTRP30414 1462 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-221ENST00000570626 AHDC1Q5TGY3 1603 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-221ENST00000570626 CCNB3Q8WWL7 1395 aa16.06■□□□□ 0.16
RBFOX1-221ENST00000570626 KDM5AP29375 1690 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-221ENST00000570626 DIP2AQ14689 1571 aa16.04■□□□□ 0.16
RBFOX1-221ENST00000570626 EP400Q96L91 3159 aa16.03■□□□□ 0.16
RBFOX1-221ENST00000570626 ATAD2Q6PL18 1390 aa16.03■□□□□ 0.16
RBFOX1-221ENST00000570626 EID1Q9Y6B2 187 aa16.03■□□□□ 0.16
RBFOX1-221ENST00000570626 TET3O43151 1660 aa16.02■□□□□ 0.16
RBFOX1-221ENST00000570626 CFAP65Q6ZU64 1925 aaKnown RBP16.02■□□□□ 0.16
RBFOX1-221ENST00000570626 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.16
RBFOX1-221ENST00000570626 RBM6P78332 1123 aaKnown RBP16.01■□□□□ 0.15
RBFOX1-221ENST00000570626 CAMSAP2Q08AD1 1489 aa16.01■□□□□ 0.15
RBFOX1-221ENST00000570626 LRP5O75197 1615 aa16.01■□□□□ 0.15
RBFOX1-221ENST00000570626 CEP152O94986 1710 aa16■□□□□ 0.15
RBFOX1-221ENST00000570626 UBTFP17480 764 aaKnown RBP16■□□□□ 0.15
RBFOX1-221ENST00000570626 SLC26A8Q96RN1 970 aa16■□□□□ 0.15
RBFOX1-221ENST00000570626 PIK3C2BO00750 1634 aa16■□□□□ 0.15
RBFOX1-221ENST00000570626 TMEM2Q9UHN6 1383 aa16■□□□□ 0.15
RBFOX1-221ENST00000570626 FYCO1Q9BQS8 1478 aa15.99■□□□□ 0.15
RBFOX1-221ENST00000570626 CCDC141Q6ZP82 1450 aa15.98■□□□□ 0.15
RBFOX1-221ENST00000570626 MROH1Q8NDA8 1641 aa15.98■□□□□ 0.15
RBFOX1-221ENST00000570626 QTRT2Q9H974 415 aaKnown RBP15.98■□□□□ 0.15
RBFOX1-221ENST00000570626 MAST1Q9Y2H9 1570 aa15.95■□□□□ 0.14
RBFOX1-221ENST00000570626 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms