RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 SUPT6HQ7KZ85 1726 aaKnown RBP16.85■□□□□ 0.29
TCF4-244ENST00000570146 KIAA1107Q9UPP5 1409 aa16.85■□□□□ 0.29
TCF4-244ENST00000570146 CFDP1Q9UEE9 299 aaPredicted RBP16.84■□□□□ 0.29
TCF4-244ENST00000570146 ATP7AQ04656 1500 aa16.84■□□□□ 0.29
TCF4-244ENST00000570146 SYCP2Q9BX26 1530 aa16.84■□□□□ 0.29
TCF4-244ENST00000570146 THEMISQ8N1K5 641 aaPredicted RBP16.83■□□□□ 0.28
TCF4-244ENST00000570146 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.28
TCF4-244ENST00000570146 PLXNC1O60486 1568 aa16.81■□□□□ 0.28
TCF4-244ENST00000570146 TNRQ92752 1358 aa16.81■□□□□ 0.28
TCF4-244ENST00000570146 DNMT1P26358 1616 aaKnown RBP16.8■□□□□ 0.28
TCF4-244ENST00000570146 GPATCH8Q9UKJ3 1502 aaKnown RBP16.79■□□□□ 0.28
TCF4-244ENST00000570146 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
TCF4-244ENST00000570146 CDC42BPAQ5VT25 1732 aa16.77■□□□□ 0.28
TCF4-244ENST00000570146 INO80Q9ULG1 1556 aaPredicted RBP16.76■□□□□ 0.27
TCF4-244ENST00000570146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.27
TCF4-244ENST00000570146 FBXO31Q5XUX0 539 aaPredicted RBP16.75■□□□□ 0.27
TCF4-244ENST00000570146 NPHP4O75161 1426 aaPredicted RBP16.75■□□□□ 0.27
TCF4-244ENST00000570146 WASHC2CQ9Y4E1 1318 aa16.74■□□□□ 0.27
TCF4-244ENST00000570146 FAM135AQ9P2D6 1515 aa16.74■□□□□ 0.27
TCF4-244ENST00000570146 LRRIQ1Q96JM4 1722 aa16.73■□□□□ 0.27
TCF4-244ENST00000570146 NEURL4Q96JN8 1562 aa16.73■□□□□ 0.27
TCF4-244ENST00000570146 KIF3BO15066 747 aa16.73■□□□□ 0.27
TCF4-244ENST00000570146 DHX29Q7Z478 1369 aaKnown RBP16.73■□□□□ 0.27
TCF4-244ENST00000570146 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
TCF4-244ENST00000570146 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
TCF4-244ENST00000570146 PZPP20742 1482 aa16.72■□□□□ 0.27
TCF4-244ENST00000570146 NLRP1Q9C000 1473 aa16.72■□□□□ 0.27
TCF4-244ENST00000570146 VWDEQ8N2E2 1590 aa16.72■□□□□ 0.27
TCF4-244ENST00000570146 MED14O60244 1454 aa16.71■□□□□ 0.27
TCF4-244ENST00000570146 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
TCF4-244ENST00000570146 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
TCF4-244ENST00000570146 ADGBQ8N7X0 1667 aa16.7■□□□□ 0.26
TCF4-244ENST00000570146 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
TCF4-244ENST00000570146 KDM5DQ9BY66 1539 aa16.69■□□□□ 0.26
TCF4-244ENST00000570146 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
TCF4-244ENST00000570146 MTUS2Q5JR59 1369 aa16.68■□□□□ 0.26
TCF4-244ENST00000570146 RGS17Q9UGC6 210 aaPredicted RBP16.67■□□□□ 0.26
TCF4-244ENST00000570146 DEPDC5O75140 1603 aa16.67■□□□□ 0.26
TCF4-244ENST00000570146 LRRC7Q96NW7 1537 aa16.66■□□□□ 0.26
TCF4-244ENST00000570146 RNF17Q9BXT8 1623 aaKnown RBP16.65■□□□□ 0.26
TCF4-244ENST00000570146 ALKQ9UM73 1620 aa16.65■□□□□ 0.26
TCF4-244ENST00000570146 RSPH4AQ5TD94 716 aa16.64■□□□□ 0.25
TCF4-244ENST00000570146 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
TCF4-244ENST00000570146 SYNMO15061 1565 aa16.63■□□□□ 0.25
TCF4-244ENST00000570146 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
TCF4-244ENST00000570146 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
TCF4-244ENST00000570146 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
TCF4-244ENST00000570146 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
TCF4-244ENST00000570146 POTEAQ6S8J7 498 aa16.58■□□□□ 0.24
TCF4-244ENST00000570146 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
TCF4-244ENST00000570146 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
TCF4-244ENST00000570146 EID1Q9Y6B2 187 aa16.57■□□□□ 0.24
TCF4-244ENST00000570146 TXNDC2Q86VQ3 553 aa16.55■□□□□ 0.24
TCF4-244ENST00000570146 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
TCF4-244ENST00000570146 TIAM1Q13009 1591 aa16.52■□□□□ 0.24
TCF4-244ENST00000570146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
TCF4-244ENST00000570146 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
TCF4-244ENST00000570146 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
TCF4-244ENST00000570146 ERVK-7P63135 1459 aa16.49■□□□□ 0.23
TCF4-244ENST00000570146 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
TCF4-244ENST00000570146 LTKP29376 864 aa16.48■□□□□ 0.23
TCF4-244ENST00000570146 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
TCF4-244ENST00000570146 ABCC3O15438 1527 aa16.47■□□□□ 0.23
TCF4-244ENST00000570146 TMEM94Q12767 1356 aa16.47■□□□□ 0.23
TCF4-244ENST00000570146 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
TCF4-244ENST00000570146 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.23
TCF4-244ENST00000570146 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
TCF4-244ENST00000570146 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
TCF4-244ENST00000570146 ZC3H13Q5T200 1668 aaKnown RBP16.44■□□□□ 0.22
TCF4-244ENST00000570146 KCNA6P17658 529 aa16.44■□□□□ 0.22
TCF4-244ENST00000570146 SLIT1O75093 1534 aa16.44■□□□□ 0.22
TCF4-244ENST00000570146 ARHGAP23Q9P227 1491 aa16.43■□□□□ 0.22
TCF4-244ENST00000570146 JCADQ9P266 1359 aa16.43■□□□□ 0.22
TCF4-244ENST00000570146 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
TCF4-244ENST00000570146 ZNF772Q68DY9 489 aaPredicted RBP16.42■□□□□ 0.22
TCF4-244ENST00000570146 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
TCF4-244ENST00000570146 MSH6P52701 1360 aa16.41■□□□□ 0.22
TCF4-244ENST00000570146 TMEM2Q9UHN6 1383 aa16.4■□□□□ 0.22
TCF4-244ENST00000570146 ARHGEF5Q12774 1597 aa16.4■□□□□ 0.22
TCF4-244ENST00000570146 UPF1Q92900 1129 aaKnown RBP eCLIP16.4■□□□□ 0.22
TCF4-244ENST00000570146 SLAIN2Q9P270 581 aa16.4■□□□□ 0.22
TCF4-244ENST00000570146 UBR1Q8IWV7 1749 aa16.39■□□□□ 0.21
TCF4-244ENST00000570146 ROBO1Q9Y6N7 1651 aa16.38■□□□□ 0.21
TCF4-244ENST00000570146 BCANQ96GW7 911 aa16.38■□□□□ 0.21
TCF4-244ENST00000570146 TRIM52Q96A61 297 aa16.37■□□□□ 0.21
TCF4-244ENST00000570146 SPATA31A6Q5VVP1 1343 aa16.37■□□□□ 0.21
TCF4-244ENST00000570146 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
TCF4-244ENST00000570146 SRCAPQ6ZRS2 3230 aa16.36■□□□□ 0.21
TCF4-244ENST00000570146 RBM33Q96EV2 1170 aaKnown RBP16.36■□□□□ 0.21
TCF4-244ENST00000570146 SLC26A8Q96RN1 970 aa16.36■□□□□ 0.21
TCF4-244ENST00000570146 EIF2AK4Q9P2K8 1649 aaKnown RBP16.36■□□□□ 0.21
TCF4-244ENST00000570146 PRDM15P57071 1507 aaPredicted RBP16.35■□□□□ 0.21
TCF4-244ENST00000570146 RXRBP28702 533 aa16.34■□□□□ 0.21
TCF4-244ENST00000570146 NKTRP30414 1462 aaKnown RBP16.34■□□□□ 0.21
TCF4-244ENST00000570146 KANK1Q14678 1352 aa16.33■□□□□ 0.2
TCF4-244ENST00000570146 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.2
TCF4-244ENST00000570146 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.2
TCF4-244ENST00000570146 MAP3K1Q13233 1512 aa16.32■□□□□ 0.2
TCF4-244ENST00000570146 MAST1Q9Y2H9 1570 aa16.32■□□□□ 0.2
TCF4-244ENST00000570146 EFCAB6Q5THR3 1501 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 1276.5 ms