RNA–Protein interactions for RNA: ENST00000570015.1

CISTR-201, chondrogenesis-associated transcript, humanhuman

TSL 2 BASIC

Gene CISTR, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISTR-201ENST00000570015 GGT6Q6P531 493 aa17.58■□□□□ 0.4
CISTR-201ENST00000570015 AGLP35573 1532 aa17.57■□□□□ 0.4
CISTR-201ENST00000570015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.4
CISTR-201ENST00000570015 DEPDC5O75140 1603 aa17.55■□□□□ 0.4
CISTR-201ENST00000570015 RNF17Q9BXT8 1623 aaKnown RBP17.55■□□□□ 0.4
CISTR-201ENST00000570015 UNC13BO14795 1591 aa17.55■□□□□ 0.4
CISTR-201ENST00000570015 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
CISTR-201ENST00000570015 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.39
CISTR-201ENST00000570015 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.39
CISTR-201ENST00000570015 MROH1Q8NDA8 1641 aa17.5■□□□□ 0.39
CISTR-201ENST00000570015 ESF1Q9H501 851 aaKnown RBP17.5■□□□□ 0.39
CISTR-201ENST00000570015 TRIM52Q96A61 297 aa17.49■□□□□ 0.39
CISTR-201ENST00000570015 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
CISTR-201ENST00000570015 VWDEQ8N2E2 1590 aa17.48■□□□□ 0.39
CISTR-201ENST00000570015 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
CISTR-201ENST00000570015 KDM4FA0A1W2PPD8 638 aa17.47■□□□□ 0.39
CISTR-201ENST00000570015 WASHC2CQ9Y4E1 1318 aa17.45■□□□□ 0.38
CISTR-201ENST00000570015 KANK1Q14678 1352 aa17.43■□□□□ 0.38
CISTR-201ENST00000570015 ZC3H13Q5T200 1668 aaKnown RBP17.43■□□□□ 0.38
CISTR-201ENST00000570015 PZPP20742 1482 aa17.43■□□□□ 0.38
CISTR-201ENST00000570015 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
CISTR-201ENST00000570015 LMTK2Q8IWU2 1503 aa17.42■□□□□ 0.38
CISTR-201ENST00000570015 NUP155O75694 1391 aa17.42■□□□□ 0.38
CISTR-201ENST00000570015 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
CISTR-201ENST00000570015 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
CISTR-201ENST00000570015 ADAMTSL3P82987 1691 aa17.41■□□□□ 0.38
CISTR-201ENST00000570015 TET3O43151 1660 aa17.39■□□□□ 0.37
CISTR-201ENST00000570015 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
CISTR-201ENST00000570015 FER1L4A9Z1Z3 1794 aa17.39■□□□□ 0.37
CISTR-201ENST00000570015 ABCC3O15438 1527 aa17.39■□□□□ 0.37
CISTR-201ENST00000570015 DHX57Q6P158 1386 aaKnown RBP17.39■□□□□ 0.37
CISTR-201ENST00000570015 CLTCQ00610 1675 aaKnown RBP17.39■□□□□ 0.37
CISTR-201ENST00000570015 CEP152O94986 1710 aa17.37■□□□□ 0.37
CISTR-201ENST00000570015 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
CISTR-201ENST00000570015 ZMYM3Q14202 1370 aa17.36■□□□□ 0.37
CISTR-201ENST00000570015 CNTLNQ9NXG0 1405 aa17.35■□□□□ 0.37
CISTR-201ENST00000570015 CAMSAP1Q5T5Y3 1602 aa17.35■□□□□ 0.37
CISTR-201ENST00000570015 FBXO31Q5XUX0 539 aaPredicted RBP17.34■□□□□ 0.37
CISTR-201ENST00000570015 MPHOSPH9Q99550 1183 aa17.34■□□□□ 0.37
CISTR-201ENST00000570015 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
CISTR-201ENST00000570015 PTPRMP28827 1452 aa17.33■□□□□ 0.37
CISTR-201ENST00000570015 RPRD2Q5VT52 1461 aaKnown RBP17.33■□□□□ 0.37
CISTR-201ENST00000570015 ARHGAP31Q2M1Z3 1444 aa17.33■□□□□ 0.36
CISTR-201ENST00000570015 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
CISTR-201ENST00000570015 E9PCH4 1651 aa17.32■□□□□ 0.36
CISTR-201ENST00000570015 FOXD1Q16676 465 aa17.31■□□□□ 0.36
CISTR-201ENST00000570015 CLSPNQ9HAW4 1339 aa17.3■□□□□ 0.36
CISTR-201ENST00000570015 PKD2Q13563 968 aa17.3■□□□□ 0.36
CISTR-201ENST00000570015 NPATQ14207 1427 aa17.29■□□□□ 0.36
CISTR-201ENST00000570015 C3P01024 1663 aa17.27■□□□□ 0.36
CISTR-201ENST00000570015 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
CISTR-201ENST00000570015 AEBP2Q6ZN18 517 aaPredicted RBP17.26■□□□□ 0.35
CISTR-201ENST00000570015 SPHKAPQ2M3C7 1700 aa17.25■□□□□ 0.35
CISTR-201ENST00000570015 PTPRTO14522 1441 aa17.25■□□□□ 0.35
CISTR-201ENST00000570015 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
CISTR-201ENST00000570015 TRPM2O94759 1503 aa17.24■□□□□ 0.35
CISTR-201ENST00000570015 ANKRD30BQ9BXX2 1392 aa17.24■□□□□ 0.35
CISTR-201ENST00000570015 TNRQ92752 1358 aa17.23■□□□□ 0.35
CISTR-201ENST00000570015 PREX1Q8TCU6 1659 aa17.23■□□□□ 0.35
CISTR-201ENST00000570015 NOS1P29475 1434 aa17.22■□□□□ 0.35
CISTR-201ENST00000570015 ERVK-7P63135 1459 aa17.22■□□□□ 0.35
CISTR-201ENST00000570015 PLA2R1Q13018 1463 aa17.22■□□□□ 0.35
CISTR-201ENST00000570015 SPATA31D1Q6ZQQ2 1576 aa17.22■□□□□ 0.35
CISTR-201ENST00000570015 SYNMO15061 1565 aa17.19■□□□□ 0.34
CISTR-201ENST00000570015 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
CISTR-201ENST00000570015 PIK3C2BO00750 1634 aa17.18■□□□□ 0.34
CISTR-201ENST00000570015 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
CISTR-201ENST00000570015 CLTCL1P53675 1640 aa17.15■□□□□ 0.34
CISTR-201ENST00000570015 IDI1Q13907 227 aa17.15■□□□□ 0.34
CISTR-201ENST00000570015 UGGT1Q9NYU2 1555 aa17.15■□□□□ 0.34
CISTR-201ENST00000570015 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
CISTR-201ENST00000570015 NEURL4Q96JN8 1562 aa17.13■□□□□ 0.33
CISTR-201ENST00000570015 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
CISTR-201ENST00000570015 HSPA2P54652 639 aa17.12■□□□□ 0.33
CISTR-201ENST00000570015 SLC52A1Q9NWF4 448 aa17.11■□□□□ 0.33
CISTR-201ENST00000570015 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
CISTR-201ENST00000570015 NLRP1Q9C000 1473 aa17.1■□□□□ 0.33
CISTR-201ENST00000570015 KDM5AP29375 1690 aaKnown RBP17.09■□□□□ 0.33
CISTR-201ENST00000570015 KIF1BO60333 1816 aa17.09■□□□□ 0.33
CISTR-201ENST00000570015 ADGRB3O60242 1522 aa17.08■□□□□ 0.32
CISTR-201ENST00000570015 SPATA31E1Q6ZUB1 1445 aa17.08■□□□□ 0.32
CISTR-201ENST00000570015 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
CISTR-201ENST00000570015 SIN3AQ96ST3 1273 aa17.08■□□□□ 0.32
CISTR-201ENST00000570015 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.32
CISTR-201ENST00000570015 A2ML1A8K2U0 1454 aa17.07■□□□□ 0.32
CISTR-201ENST00000570015 TIMELESSQ9UNS1 1208 aa17.07■□□□□ 0.32
CISTR-201ENST00000570015 CEP170BQ9Y4F5 1589 aaPredicted RBP17.06■□□□□ 0.32
CISTR-201ENST00000570015 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
CISTR-201ENST00000570015 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
CISTR-201ENST00000570015 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
CISTR-201ENST00000570015 TMEM131LA2VDJ0 1609 aa17.05■□□□□ 0.32
CISTR-201ENST00000570015 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
CISTR-201ENST00000570015 ZNF142P52746 1687 aaPredicted RBP17.04■□□□□ 0.32
CISTR-201ENST00000570015 NUTM2DQ5VT03 806 aaPredicted RBP17.04■□□□□ 0.32
CISTR-201ENST00000570015 THEMISQ8N1K5 641 aaPredicted RBP17.04■□□□□ 0.32
CISTR-201ENST00000570015 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
CISTR-201ENST00000570015 UBR1Q8IWV7 1749 aa17.01■□□□□ 0.31
CISTR-201ENST00000570015 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
CISTR-201ENST00000570015 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
CISTR-201ENST00000570015 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms