RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.57
EDC3-217ENST00000569606 MROH1Q8NDA8 1641 aa18.57■□□□□ 0.56
EDC3-217ENST00000569606 KIF3BO15066 747 aa18.57■□□□□ 0.56
EDC3-217ENST00000569606 KDM5DQ9BY66 1539 aa18.57■□□□□ 0.56
EDC3-217ENST00000569606 PRDM15P57071 1507 aaPredicted RBP18.55■□□□□ 0.56
EDC3-217ENST00000569606 IQGAP3Q86VI3 1631 aa18.54■□□□□ 0.56
EDC3-217ENST00000569606 TRIM52Q96A61 297 aa18.54■□□□□ 0.56
EDC3-217ENST00000569606 PZPP20742 1482 aa18.52■□□□□ 0.56
EDC3-217ENST00000569606 VWDEQ8N2E2 1590 aa18.52■□□□□ 0.56
EDC3-217ENST00000569606 NUP155O75694 1391 aa18.52■□□□□ 0.55
EDC3-217ENST00000569606 DHX57Q6P158 1386 aaKnown RBP18.52■□□□□ 0.55
EDC3-217ENST00000569606 FAM135AQ9P2D6 1515 aa18.5■□□□□ 0.55
EDC3-217ENST00000569606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.55
EDC3-217ENST00000569606 CEP152O94986 1710 aa18.49■□□□□ 0.55
EDC3-217ENST00000569606 GGT6Q6P531 493 aa18.48■□□□□ 0.55
EDC3-217ENST00000569606 KANK1Q14678 1352 aa18.47■□□□□ 0.55
EDC3-217ENST00000569606 MPHOSPH9Q99550 1183 aa18.47■□□□□ 0.55
EDC3-217ENST00000569606 ZC3H13Q5T200 1668 aaKnown RBP18.47■□□□□ 0.55
EDC3-217ENST00000569606 LMTK2Q8IWU2 1503 aa18.45■□□□□ 0.54
EDC3-217ENST00000569606 TET3O43151 1660 aa18.45■□□□□ 0.54
EDC3-217ENST00000569606 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
EDC3-217ENST00000569606 ARID4BQ4LE39 1312 aaPredicted RBP18.45■□□□□ 0.54
EDC3-217ENST00000569606 ABCC3O15438 1527 aa18.44■□□□□ 0.54
EDC3-217ENST00000569606 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
EDC3-217ENST00000569606 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
EDC3-217ENST00000569606 E9PCH4 1651 aa18.41■□□□□ 0.54
EDC3-217ENST00000569606 EFCAB6Q5THR3 1501 aa18.41■□□□□ 0.54
EDC3-217ENST00000569606 MLECQ14165 292 aa18.41■□□□□ 0.54
EDC3-217ENST00000569606 CLTCQ00610 1675 aaKnown RBP18.41■□□□□ 0.54
EDC3-217ENST00000569606 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
EDC3-217ENST00000569606 WASHC2CQ9Y4E1 1318 aa18.4■□□□□ 0.54
EDC3-217ENST00000569606 PKD2Q13563 968 aa18.39■□□□□ 0.53
EDC3-217ENST00000569606 FER1L4A9Z1Z3 1794 aa18.37■□□□□ 0.53
EDC3-217ENST00000569606 FOXD1Q16676 465 aa18.36■□□□□ 0.53
EDC3-217ENST00000569606 MROH2AA6NES4 1674 aa18.35■□□□□ 0.53
EDC3-217ENST00000569606 ADAMTSL3P82987 1691 aa18.34■□□□□ 0.53
EDC3-217ENST00000569606 RPRD2Q5VT52 1461 aaKnown RBP18.34■□□□□ 0.53
EDC3-217ENST00000569606 ARHGAP31Q2M1Z3 1444 aa18.34■□□□□ 0.53
EDC3-217ENST00000569606 CLSPNQ9HAW4 1339 aa18.34■□□□□ 0.53
EDC3-217ENST00000569606 NPATQ14207 1427 aa18.33■□□□□ 0.53
EDC3-217ENST00000569606 ANKRD30BQ9BXX2 1392 aa18.33■□□□□ 0.53
EDC3-217ENST00000569606 SPHKAPQ2M3C7 1700 aa18.33■□□□□ 0.52
EDC3-217ENST00000569606 MADDQ8WXG6 1647 aa18.33■□□□□ 0.52
EDC3-217ENST00000569606 CNTLNQ9NXG0 1405 aa18.32■□□□□ 0.52
EDC3-217ENST00000569606 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
EDC3-217ENST00000569606 ESF1Q9H501 851 aaKnown RBP18.3■□□□□ 0.52
EDC3-217ENST00000569606 PLA2R1Q13018 1463 aa18.3■□□□□ 0.52
EDC3-217ENST00000569606 PREX1Q8TCU6 1659 aa18.3■□□□□ 0.52
EDC3-217ENST00000569606 PTPRTO14522 1441 aa18.3■□□□□ 0.52
EDC3-217ENST00000569606 RIMS1Q86UR5 1692 aaKnown RBP18.29■□□□□ 0.52
EDC3-217ENST00000569606 ZMYM3Q14202 1370 aa18.28■□□□□ 0.52
EDC3-217ENST00000569606 TRPM2O94759 1503 aa18.28■□□□□ 0.52
EDC3-217ENST00000569606 C3P01024 1663 aa18.28■□□□□ 0.52
EDC3-217ENST00000569606 NOS1P29475 1434 aa18.26■□□□□ 0.51
EDC3-217ENST00000569606 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
EDC3-217ENST00000569606 ERVK-7P63135 1459 aa18.25■□□□□ 0.51
EDC3-217ENST00000569606 SYNMO15061 1565 aa18.25■□□□□ 0.51
EDC3-217ENST00000569606 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
EDC3-217ENST00000569606 CLTCL1P53675 1640 aa18.23■□□□□ 0.51
EDC3-217ENST00000569606 FBXO31Q5XUX0 539 aaPredicted RBP18.22■□□□□ 0.51
EDC3-217ENST00000569606 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
EDC3-217ENST00000569606 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
EDC3-217ENST00000569606 PIK3C2BO00750 1634 aa18.21■□□□□ 0.51
EDC3-217ENST00000569606 NEUROD1Q13562 356 aa18.19■□□□□ 0.5
EDC3-217ENST00000569606 CEBPAP49715 358 aaPredicted RBP18.18■□□□□ 0.5
EDC3-217ENST00000569606 KIF1BO60333 1816 aa18.17■□□□□ 0.5
EDC3-217ENST00000569606 PTPRMP28827 1452 aa18.16■□□□□ 0.5
EDC3-217ENST00000569606 TNRQ92752 1358 aa18.14■□□□□ 0.49
EDC3-217ENST00000569606 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
EDC3-217ENST00000569606 KDM4FA0A1W2PPD8 638 aa18.13■□□□□ 0.49
EDC3-217ENST00000569606 SLC52A1Q9NWF4 448 aa18.13■□□□□ 0.49
EDC3-217ENST00000569606 IDI1Q13907 227 aa18.12■□□□□ 0.49
EDC3-217ENST00000569606 SPATA31E1Q6ZUB1 1445 aa18.12■□□□□ 0.49
EDC3-217ENST00000569606 ADGRB3O60242 1522 aa18.12■□□□□ 0.49
EDC3-217ENST00000569606 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
EDC3-217ENST00000569606 TONSLQ96HA7 1378 aa18.11■□□□□ 0.49
EDC3-217ENST00000569606 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
EDC3-217ENST00000569606 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
EDC3-217ENST00000569606 TIMELESSQ9UNS1 1208 aa18.1■□□□□ 0.49
EDC3-217ENST00000569606 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
EDC3-217ENST00000569606 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
EDC3-217ENST00000569606 NLRP1Q9C000 1473 aa18.08■□□□□ 0.49
EDC3-217ENST00000569606 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
EDC3-217ENST00000569606 SETD1BQ9UPS6 1966 aaKnown RBP18.06■□□□□ 0.48
EDC3-217ENST00000569606 L3MBTL2Q969R5 705 aa18.06■□□□□ 0.48
EDC3-217ENST00000569606 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
EDC3-217ENST00000569606 IFT172Q9UG01 1749 aa18.06■□□□□ 0.48
EDC3-217ENST00000569606 CHGAP10645 457 aaKnown RBP18.05■□□□□ 0.48
EDC3-217ENST00000569606 RGL3Q3MIN7 710 aa18.05■□□□□ 0.48
EDC3-217ENST00000569606 ZNF142P52746 1687 aaPredicted RBP18.04■□□□□ 0.48
EDC3-217ENST00000569606 A2ML1A8K2U0 1454 aa18.03■□□□□ 0.48
EDC3-217ENST00000569606 PPLO60437 1756 aa18.03■□□□□ 0.48
EDC3-217ENST00000569606 CEP170BQ9Y4F5 1589 aaPredicted RBP18.03■□□□□ 0.48
EDC3-217ENST00000569606 NEXMIFQ5QGS0 1516 aa18.01■□□□□ 0.47
EDC3-217ENST00000569606 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
EDC3-217ENST00000569606 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
EDC3-217ENST00000569606 ZNF326Q5BKZ1 582 aaKnown RBP17.99■□□□□ 0.47
EDC3-217ENST00000569606 DCAF11Q8TEB1 546 aa17.99■□□□□ 0.47
EDC3-217ENST00000569606 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
EDC3-217ENST00000569606 RPGRIP1LQ68CZ1 1315 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms