RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
CLN6-209ENST00000569336 DHX29Q7Z478 1369 aaKnown RBP15.18■□□□□ 0.02
CLN6-209ENST00000569336 ZNF142P52746 1687 aaPredicted RBP15.17■□□□□ 0.02
CLN6-209ENST00000569336 ABCC5O15440 1437 aa15.17■□□□□ 0.02
CLN6-209ENST00000569336 CAMSAP1Q5T5Y3 1602 aa15.15■□□□□ 0.02
CLN6-209ENST00000569336 MYO3AQ8NEV4 1616 aa15.15■□□□□ 0.02
CLN6-209ENST00000569336 ADGRL2O95490 1459 aa15.14■□□□□ 0.01
CLN6-209ENST00000569336 MROH1Q8NDA8 1641 aa15.14■□□□□ 0.01
CLN6-209ENST00000569336 PRDM15P57071 1507 aaPredicted RBP15.14■□□□□ 0.01
CLN6-209ENST00000569336 ERBINQ96RT1 1412 aa15.14■□□□□ 0.01
CLN6-209ENST00000569336 CERKQ8TCT0 537 aa15.13■□□□□ 0.01
CLN6-209ENST00000569336 KIF15Q9NS87 1388 aa15.12■□□□□ 0.01
CLN6-209ENST00000569336 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
CLN6-209ENST00000569336 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
CLN6-209ENST00000569336 FAM50AQ14320 339 aaKnown RBP15.1■□□□□ 0.01
CLN6-209ENST00000569336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.1■□□□□ 0.01
CLN6-209ENST00000569336 GCC2Q8IWJ2 1684 aa15.09■□□□□ 0.01
CLN6-209ENST00000569336 NPATQ14207 1427 aa15.09■□□□□ 0.01
CLN6-209ENST00000569336 KIF3BO15066 747 aa15.08■□□□□ 0
CLN6-209ENST00000569336 GGT6Q6P531 493 aa15.08■□□□□ 0
CLN6-209ENST00000569336 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0
CLN6-209ENST00000569336 UHRF1BP1Q6BDS2 1440 aa15.08■□□□□ 0
CLN6-209ENST00000569336 ABCC3O15438 1527 aa15.07■□□□□ 0
CLN6-209ENST00000569336 POLR1AO95602 1720 aaPredicted RBP15.07■□□□□ 0
CLN6-209ENST00000569336 NCOA1Q15788 1441 aa15.07■□□□□ 0
CLN6-209ENST00000569336 UNC13BO14795 1591 aa15.07■□□□□ 0
CLN6-209ENST00000569336 HSPA2P54652 639 aa15.06■□□□□ 0
CLN6-209ENST00000569336 RRBP1Q9P2E9 1410 aaKnown RBP15.06■□□□□ 0
CLN6-209ENST00000569336 PZPP20742 1482 aa15.06■□□□□ 0
CLN6-209ENST00000569336 ZMYM3Q14202 1370 aa15.05■□□□□ -0
CLN6-209ENST00000569336 CEP170BQ9Y4F5 1589 aaPredicted RBP15.05■□□□□ -0
CLN6-209ENST00000569336 STRCQ7RTU9 1775 aa15.05■□□□□ -0
CLN6-209ENST00000569336 TET3O43151 1660 aa15.03■□□□□ -0
CLN6-209ENST00000569336 VWDEQ8N2E2 1590 aa15.02■□□□□ -0
CLN6-209ENST00000569336 PTPRKQ15262 1439 aa15.02■□□□□ -0
CLN6-209ENST00000569336 ROCK1Q13464 1354 aa15.02■□□□□ -0
CLN6-209ENST00000569336 CEBPAP49715 358 aaPredicted RBP15.02■□□□□ -0
CLN6-209ENST00000569336 PPARGC1BQ86YN6 1023 aaKnown RBP15.02■□□□□ -0
CLN6-209ENST00000569336 WASHC2CQ9Y4E1 1318 aa15.01□□□□□ -0.01
CLN6-209ENST00000569336 RRP7BPQ9NSQ0 103 aa15.01□□□□□ -0.01
CLN6-209ENST00000569336 CHIC2Q9UKJ5 165 aa15.01□□□□□ -0.01
CLN6-209ENST00000569336 IQGAP3Q86VI3 1631 aa15.01□□□□□ -0.01
CLN6-209ENST00000569336 KANK1Q14678 1352 aa15□□□□□ -0.01
CLN6-209ENST00000569336 SPATA31D1Q6ZQQ2 1576 aa15□□□□□ -0.01
CLN6-209ENST00000569336 EFCAB6Q5THR3 1501 aa15□□□□□ -0.01
CLN6-209ENST00000569336 ANKRD50Q9ULJ7 1429 aa15□□□□□ -0.01
CLN6-209ENST00000569336 LMTK2Q8IWU2 1503 aa14.99□□□□□ -0.01
CLN6-209ENST00000569336 KDM5AP29375 1690 aaKnown RBP14.99□□□□□ -0.01
CLN6-209ENST00000569336 UBR1Q8IWV7 1749 aa14.97□□□□□ -0.01
CLN6-209ENST00000569336 E9PCH4 1651 aa14.96□□□□□ -0.01
CLN6-209ENST00000569336 A2ML1A8K2U0 1454 aa14.95□□□□□ -0.02
CLN6-209ENST00000569336 ERVK-7P63135 1459 aa14.95□□□□□ -0.02
CLN6-209ENST00000569336 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
CLN6-209ENST00000569336 ARHGAP31Q2M1Z3 1444 aa14.95□□□□□ -0.02
CLN6-209ENST00000569336 MYO5BQ9ULV0 1848 aa14.95□□□□□ -0.02
CLN6-209ENST00000569336 TNRQ92752 1358 aa14.94□□□□□ -0.02
CLN6-209ENST00000569336 SPHKAPQ2M3C7 1700 aa14.94□□□□□ -0.02
CLN6-209ENST00000569336 PLA2R1Q13018 1463 aa14.93□□□□□ -0.02
CLN6-209ENST00000569336 ITGAEP38570 1179 aa14.92□□□□□ -0.02
CLN6-209ENST00000569336 RPRD2Q5VT52 1461 aaKnown RBP14.92□□□□□ -0.02
CLN6-209ENST00000569336 UGGT1Q9NYU2 1555 aa14.92□□□□□ -0.02
CLN6-209ENST00000569336 PIK3C2BO00750 1634 aa14.92□□□□□ -0.02
CLN6-209ENST00000569336 SYNMO15061 1565 aa14.9□□□□□ -0.02
CLN6-209ENST00000569336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
CLN6-209ENST00000569336 IQGAP1P46940 1657 aa14.87□□□□□ -0.03
CLN6-209ENST00000569336 HFM1A2PYH4 1435 aa14.87□□□□□ -0.03
CLN6-209ENST00000569336 KIF1BO60333 1816 aa14.87□□□□□ -0.03
CLN6-209ENST00000569336 NAIPQ13075 1403 aa14.86□□□□□ -0.03
CLN6-209ENST00000569336 FBXO31Q5XUX0 539 aaPredicted RBP14.85□□□□□ -0.03
CLN6-209ENST00000569336 DMRT2Q9Y5R5 561 aa14.85□□□□□ -0.03
CLN6-209ENST00000569336 ADGRB3O60242 1522 aa14.85□□□□□ -0.03
CLN6-209ENST00000569336 NEURL4Q96JN8 1562 aa14.85□□□□□ -0.03
CLN6-209ENST00000569336 PTPRTO14522 1441 aa14.83□□□□□ -0.03
CLN6-209ENST00000569336 NOS1P29475 1434 aa14.82□□□□□ -0.04
CLN6-209ENST00000569336 NUP155O75694 1391 aa14.8□□□□□ -0.04
CLN6-209ENST00000569336 SLIT1O75093 1534 aa14.8□□□□□ -0.04
CLN6-209ENST00000569336 TMEM131LA2VDJ0 1609 aa14.8□□□□□ -0.04
CLN6-209ENST00000569336 PKD2Q13563 968 aa14.79□□□□□ -0.04
CLN6-209ENST00000569336 THEMISQ8N1K5 641 aaPredicted RBP14.78□□□□□ -0.04
CLN6-209ENST00000569336 MED14O60244 1454 aa14.76□□□□□ -0.05
CLN6-209ENST00000569336 TRPM2O94759 1503 aa14.76□□□□□ -0.05
CLN6-209ENST00000569336 ARHGAP23Q9P227 1491 aa14.76□□□□□ -0.05
CLN6-209ENST00000569336 SCAF11Q99590 1463 aaKnown RBP14.75□□□□□ -0.05
CLN6-209ENST00000569336 CLTCL1P53675 1640 aa14.74□□□□□ -0.05
CLN6-209ENST00000569336 ACIN1Q9UKV3 1341 aaKnown RBP14.73□□□□□ -0.05
CLN6-209ENST00000569336 SLC52A1Q9NWF4 448 aa14.73□□□□□ -0.05
CLN6-209ENST00000569336 NCKAP5LQ9HCH0 1330 aa14.72□□□□□ -0.05
CLN6-209ENST00000569336 ANKLE2Q86XL3 938 aa14.72□□□□□ -0.05
CLN6-209ENST00000569336 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
CLN6-209ENST00000569336 LTBP4Q8N2S1 1624 aa14.72□□□□□ -0.05
CLN6-209ENST00000569336 NPHP4O75161 1426 aaPredicted RBP14.72□□□□□ -0.05
CLN6-209ENST00000569336 STRCP1A6NGW2 1772 aa14.71□□□□□ -0.05
CLN6-209ENST00000569336 IQSEC2Q5JU85 1478 aa14.7□□□□□ -0.06
CLN6-209ENST00000569336 CPS1P31327 1500 aa14.69□□□□□ -0.06
CLN6-209ENST00000569336 PPLO60437 1756 aa14.69□□□□□ -0.06
CLN6-209ENST00000569336 TMEM2Q9UHN6 1383 aa14.69□□□□□ -0.06
CLN6-209ENST00000569336 SETD5Q9C0A6 1442 aa14.68□□□□□ -0.06
CLN6-209ENST00000569336 IDI1Q13907 227 aa14.68□□□□□ -0.06
CLN6-209ENST00000569336 CHD2O14647 1828 aaKnown RBP14.68□□□□□ -0.06
CLN6-209ENST00000569336 IFT172Q9UG01 1749 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms