RNA–Protein interactions for RNA: ENST00000569300.5

GGA2-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 4

Gene GGA2, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-216ENST00000569300 AGLP35573 1532 aa8.64□□□□□ -1.03
GGA2-216ENST00000569300 DHX29Q7Z478 1369 aaKnown RBP8.63□□□□□ -1.03
GGA2-216ENST00000569300 DEPDC5O75140 1603 aa8.63□□□□□ -1.03
GGA2-216ENST00000569300 ITGAEP38570 1179 aa8.63□□□□□ -1.03
GGA2-216ENST00000569300 UNC13BO14795 1591 aa8.63□□□□□ -1.03
GGA2-216ENST00000569300 KDM5DQ9BY66 1539 aa8.63□□□□□ -1.03
GGA2-216ENST00000569300 A2MP01023 1474 aa8.63□□□□□ -1.03
GGA2-216ENST00000569300 RAB3GAP2Q9H2M9 1393 aa8.62□□□□□ -1.03
GGA2-216ENST00000569300 RNF17Q9BXT8 1623 aaKnown RBP8.62□□□□□ -1.03
GGA2-216ENST00000569300 RAPGEF3O95398 923 aa8.62□□□□□ -1.03
GGA2-216ENST00000569300 CHIC2Q9UKJ5 165 aa8.62□□□□□ -1.03
GGA2-216ENST00000569300 FAM135AQ9P2D6 1515 aa8.62□□□□□ -1.03
GGA2-216ENST00000569300 ATP10AO60312 1499 aa8.62□□□□□ -1.03
GGA2-216ENST00000569300 RRP7BPQ9NSQ0 103 aa8.61□□□□□ -1.03
GGA2-216ENST00000569300 CNKSR2Q8WXI2 1034 aa8.6□□□□□ -1.03
GGA2-216ENST00000569300 YEATS2Q9ULM3 1422 aa8.6□□□□□ -1.03
GGA2-216ENST00000569300 VWDEQ8N2E2 1590 aa8.6□□□□□ -1.03
GGA2-216ENST00000569300 PRDM15P57071 1507 aaPredicted RBP8.59□□□□□ -1.03
GGA2-216ENST00000569300 IQGAP3Q86VI3 1631 aa8.59□□□□□ -1.03
GGA2-216ENST00000569300 NCBP3Q53F19 620 aaKnown RBP8.59□□□□□ -1.03
GGA2-216ENST00000569300 ZC3H13Q5T200 1668 aaKnown RBP8.58□□□□□ -1.04
GGA2-216ENST00000569300 MROH1Q8NDA8 1641 aa8.58□□□□□ -1.04
GGA2-216ENST00000569300 CLSPNQ9HAW4 1339 aa8.57□□□□□ -1.04
GGA2-216ENST00000569300 LMTK2Q8IWU2 1503 aa8.57□□□□□ -1.04
GGA2-216ENST00000569300 TET3O43151 1660 aa8.56□□□□□ -1.04
GGA2-216ENST00000569300 SIGLEC1Q9BZZ2 1709 aa8.55□□□□□ -1.04
GGA2-216ENST00000569300 MYT1LQ9UL68 1186 aa8.55□□□□□ -1.04
GGA2-216ENST00000569300 DHX57Q6P158 1386 aaKnown RBP8.55□□□□□ -1.04
GGA2-216ENST00000569300 PZPP20742 1482 aa8.55□□□□□ -1.04
GGA2-216ENST00000569300 KANK1Q14678 1352 aa8.54□□□□□ -1.04
GGA2-216ENST00000569300 NUP155O75694 1391 aa8.53□□□□□ -1.04
GGA2-216ENST00000569300 MROH2AA6NES4 1674 aa8.53□□□□□ -1.04
GGA2-216ENST00000569300 RPRD2Q5VT52 1461 aaKnown RBP8.52□□□□□ -1.05
GGA2-216ENST00000569300 KIF3BO15066 747 aa8.52□□□□□ -1.05
GGA2-216ENST00000569300 ARHGAP31Q2M1Z3 1444 aa8.52□□□□□ -1.05
GGA2-216ENST00000569300 CEP152O94986 1710 aa8.51□□□□□ -1.05
GGA2-216ENST00000569300 ABCC3O15438 1527 aa8.51□□□□□ -1.05
GGA2-216ENST00000569300 EFCAB6Q5THR3 1501 aa8.51□□□□□ -1.05
GGA2-216ENST00000569300 E9PCH4 1651 aa8.51□□□□□ -1.05
GGA2-216ENST00000569300 MPHOSPH9Q99550 1183 aa8.51□□□□□ -1.05
GGA2-216ENST00000569300 CAMSAP1Q5T5Y3 1602 aa8.51□□□□□ -1.05
GGA2-216ENST00000569300 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
GGA2-216ENST00000569300 CNTLNQ9NXG0 1405 aa8.5□□□□□ -1.05
GGA2-216ENST00000569300 SLC4A1APQ9BWU0 796 aaKnown RBP8.49□□□□□ -1.05
GGA2-216ENST00000569300 SPHKAPQ2M3C7 1700 aa8.49□□□□□ -1.05
GGA2-216ENST00000569300 PTPRTO14522 1441 aa8.48□□□□□ -1.05
GGA2-216ENST00000569300 ADAMTSL3P82987 1691 aa8.48□□□□□ -1.05
GGA2-216ENST00000569300 FER1L4A9Z1Z3 1794 aa8.48□□□□□ -1.05
GGA2-216ENST00000569300 NEURL4Q96JN8 1562 aa8.48□□□□□ -1.05
GGA2-216ENST00000569300 ANKRD30BQ9BXX2 1392 aa8.48□□□□□ -1.05
GGA2-216ENST00000569300 CLTCQ00610 1675 aaKnown RBP8.47□□□□□ -1.05
GGA2-216ENST00000569300 RNF216Q9NWF9 866 aaPredicted RBP8.47□□□□□ -1.05
GGA2-216ENST00000569300 TRPM2O94759 1503 aa8.47□□□□□ -1.05
GGA2-216ENST00000569300 WASHC2CQ9Y4E1 1318 aa8.47□□□□□ -1.05
GGA2-216ENST00000569300 PKD2Q13563 968 aa8.46□□□□□ -1.06
GGA2-216ENST00000569300 GGT6Q6P531 493 aa8.46□□□□□ -1.06
GGA2-216ENST00000569300 TIMELESSQ9UNS1 1208 aa8.46□□□□□ -1.06
GGA2-216ENST00000569300 PREX1Q8TCU6 1659 aa8.46□□□□□ -1.06
GGA2-216ENST00000569300 NOS1P29475 1434 aa8.46□□□□□ -1.06
GGA2-216ENST00000569300 NPATQ14207 1427 aa8.46□□□□□ -1.06
GGA2-216ENST00000569300 HOXD11P31277 338 aaPredicted RBP8.45□□□□□ -1.06
GGA2-216ENST00000569300 CCER1Q8TC90 406 aaPredicted RBP8.45□□□□□ -1.06
GGA2-216ENST00000569300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.45□□□□□ -1.061e-11■□□□□ 10.6
GGA2-216ENST00000569300 SPATA31D1Q6ZQQ2 1576 aa8.44□□□□□ -1.06
GGA2-216ENST00000569300 PIK3C2BO00750 1634 aa8.44□□□□□ -1.06
GGA2-216ENST00000569300 SETD1BQ9UPS6 1966 aaKnown RBP8.44□□□□□ -1.06
GGA2-216ENST00000569300 PLA2R1Q13018 1463 aa8.44□□□□□ -1.06
GGA2-216ENST00000569300 KDM5AP29375 1690 aaKnown RBP8.43□□□□□ -1.06
GGA2-216ENST00000569300 CFAP65Q6ZU64 1925 aaKnown RBP8.43□□□□□ -1.06
GGA2-216ENST00000569300 ZEB1P37275 1124 aaPredicted RBP8.43□□□□□ -1.06
GGA2-216ENST00000569300 ARID4BQ4LE39 1312 aaPredicted RBP8.43□□□□□ -1.06
GGA2-216ENST00000569300 MADDQ8WXG6 1647 aa8.43□□□□□ -1.06
GGA2-216ENST00000569300 C3P01024 1663 aa8.43□□□□□ -1.06
GGA2-216ENST00000569300 KIF1BO60333 1816 aa8.43□□□□□ -1.06
GGA2-216ENST00000569300 ESF1Q9H501 851 aaKnown RBP8.42□□□□□ -1.06
GGA2-216ENST00000569300 ZMYM3Q14202 1370 aa8.42□□□□□ -1.06
GGA2-216ENST00000569300 ERVK-7P63135 1459 aa8.42□□□□□ -1.06
GGA2-216ENST00000569300 SYNMO15061 1565 aa8.41□□□□□ -1.06
GGA2-216ENST00000569300 CCDC144AA2RUR9 1427 aa8.41□□□□□ -1.06
GGA2-216ENST00000569300 RIMS1Q86UR5 1692 aaKnown RBP8.4□□□□□ -1.06
GGA2-216ENST00000569300 CLTCL1P53675 1640 aa8.4□□□□□ -1.06
GGA2-216ENST00000569300 DCAF8L1A6NGE4 600 aa8.4□□□□□ -1.06
GGA2-216ENST00000569300 SLC52A1Q9NWF4 448 aa8.4□□□□□ -1.06
GGA2-216ENST00000569300 STAC3Q96MF2 364 aa8.39□□□□□ -1.07
GGA2-216ENST00000569300 SPATA31E1Q6ZUB1 1445 aa8.38□□□□□ -1.07
GGA2-216ENST00000569300 MLECQ14165 292 aa8.38□□□□□ -1.07
GGA2-216ENST00000569300 ADGRB3O60242 1522 aa8.38□□□□□ -1.07
GGA2-216ENST00000569300 NLRP1Q9C000 1473 aa8.38□□□□□ -1.07
GGA2-216ENST00000569300 IFT172Q9UG01 1749 aa8.37□□□□□ -1.07
GGA2-216ENST00000569300 ZNF142P52746 1687 aaPredicted RBP8.37□□□□□ -1.07
GGA2-216ENST00000569300 TMEM131LA2VDJ0 1609 aa8.36□□□□□ -1.07
GGA2-216ENST00000569300 KCNA4P22459 653 aa8.36□□□□□ -1.07
GGA2-216ENST00000569300 PTPRMP28827 1452 aa8.36□□□□□ -1.07
GGA2-216ENST00000569300 TNRQ92752 1358 aa8.35□□□□□ -1.07
GGA2-216ENST00000569300 TONSLQ96HA7 1378 aa8.35□□□□□ -1.07
GGA2-216ENST00000569300 PPLO60437 1756 aa8.35□□□□□ -1.07
GGA2-216ENST00000569300 RPGRIP1LQ68CZ1 1315 aa8.35□□□□□ -1.07
GGA2-216ENST00000569300 NPM3O75607 178 aaKnown RBP8.35□□□□□ -1.07
GGA2-216ENST00000569300 SIN3AQ96ST3 1273 aa8.35□□□□□ -1.07
GGA2-216ENST00000569300 MYO5BQ9ULV0 1848 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms