RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 KIF15Q9NS87 1388 aa13.87□□□□□ -0.19
LINC00555-201ENST00000569288 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
LINC00555-201ENST00000569288 DUOX2Q9NRD8 1548 aa13.86□□□□□ -0.19
LINC00555-201ENST00000569288 MPHOSPH9Q99550 1183 aa13.86□□□□□ -0.19
LINC00555-201ENST00000569288 ERBINQ96RT1 1412 aa13.85□□□□□ -0.19
LINC00555-201ENST00000569288 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
LINC00555-201ENST00000569288 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.19
LINC00555-201ENST00000569288 KDM5DQ9BY66 1539 aa13.83□□□□□ -0.2
LINC00555-201ENST00000569288 RNF17Q9BXT8 1623 aaKnown RBP13.82□□□□□ -0.2
LINC00555-201ENST00000569288 TRIM52Q96A61 297 aa13.81□□□□□ -0.2
LINC00555-201ENST00000569288 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
LINC00555-201ENST00000569288 DEPDC5O75140 1603 aa13.8□□□□□ -0.2
LINC00555-201ENST00000569288 MADDQ8WXG6 1647 aa13.8□□□□□ -0.2
LINC00555-201ENST00000569288 MROH2AA6NES4 1674 aa13.8□□□□□ -0.2
LINC00555-201ENST00000569288 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
LINC00555-201ENST00000569288 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
LINC00555-201ENST00000569288 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
LINC00555-201ENST00000569288 ZC3H13Q5T200 1668 aaKnown RBP13.78□□□□□ -0.2
LINC00555-201ENST00000569288 SETD1BQ9UPS6 1966 aaKnown RBP13.78□□□□□ -0.2
LINC00555-201ENST00000569288 RIMS1Q86UR5 1692 aaKnown RBP13.77□□□□□ -0.21
LINC00555-201ENST00000569288 ANKRD30BQ9BXX2 1392 aa13.77□□□□□ -0.21
LINC00555-201ENST00000569288 CNTLNQ9NXG0 1405 aa13.77□□□□□ -0.21
LINC00555-201ENST00000569288 MROH1Q8NDA8 1641 aa13.76□□□□□ -0.21
LINC00555-201ENST00000569288 NUP155O75694 1391 aa13.76□□□□□ -0.21
LINC00555-201ENST00000569288 PRDM15P57071 1507 aaPredicted RBP13.75□□□□□ -0.21
LINC00555-201ENST00000569288 PZPP20742 1482 aa13.74□□□□□ -0.21
LINC00555-201ENST00000569288 CLTCQ00610 1675 aaKnown RBP13.74□□□□□ -0.21
LINC00555-201ENST00000569288 KIF3BO15066 747 aa13.73□□□□□ -0.21
LINC00555-201ENST00000569288 UNC13BO14795 1591 aa13.73□□□□□ -0.21
LINC00555-201ENST00000569288 VWDEQ8N2E2 1590 aa13.73□□□□□ -0.21
LINC00555-201ENST00000569288 PTPRMP28827 1452 aa13.73□□□□□ -0.21
LINC00555-201ENST00000569288 C3P01024 1663 aa13.72□□□□□ -0.21
LINC00555-201ENST00000569288 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
LINC00555-201ENST00000569288 STAC3Q96MF2 364 aa13.71□□□□□ -0.21
LINC00555-201ENST00000569288 PKD2Q13563 968 aa13.7□□□□□ -0.22
LINC00555-201ENST00000569288 MLECQ14165 292 aa13.7□□□□□ -0.22
LINC00555-201ENST00000569288 CEP152O94986 1710 aa13.7□□□□□ -0.22
LINC00555-201ENST00000569288 KANK1Q14678 1352 aa13.7□□□□□ -0.22
LINC00555-201ENST00000569288 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
LINC00555-201ENST00000569288 RPRD2Q5VT52 1461 aaKnown RBP13.69□□□□□ -0.22
LINC00555-201ENST00000569288 GGT6Q6P531 493 aa13.69□□□□□ -0.22
LINC00555-201ENST00000569288 ABCC3O15438 1527 aa13.69□□□□□ -0.22
LINC00555-201ENST00000569288 ESF1Q9H501 851 aaKnown RBP13.68□□□□□ -0.22
LINC00555-201ENST00000569288 CAMSAP1Q5T5Y3 1602 aa13.68□□□□□ -0.22
LINC00555-201ENST00000569288 IQGAP3Q86VI3 1631 aa13.68□□□□□ -0.22
LINC00555-201ENST00000569288 SIN3AQ96ST3 1273 aa13.67□□□□□ -0.22
LINC00555-201ENST00000569288 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
LINC00555-201ENST00000569288 ARHGAP31Q2M1Z3 1444 aa13.66□□□□□ -0.22
LINC00555-201ENST00000569288 ZMYM3Q14202 1370 aa13.66□□□□□ -0.22
LINC00555-201ENST00000569288 TET3O43151 1660 aa13.66□□□□□ -0.22
LINC00555-201ENST00000569288 WASHC2CQ9Y4E1 1318 aa13.65□□□□□ -0.22
LINC00555-201ENST00000569288 NPATQ14207 1427 aa13.65□□□□□ -0.22
LINC00555-201ENST00000569288 PREX1Q8TCU6 1659 aa13.64□□□□□ -0.23
LINC00555-201ENST00000569288 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
LINC00555-201ENST00000569288 NEUROD1Q13562 356 aa13.63□□□□□ -0.23
LINC00555-201ENST00000569288 ZNF316A6NFI3 1004 aaPredicted RBP13.62□□□□□ -0.23
LINC00555-201ENST00000569288 EFCAB6Q5THR3 1501 aa13.62□□□□□ -0.23
LINC00555-201ENST00000569288 PTPRTO14522 1441 aa13.62□□□□□ -0.23
LINC00555-201ENST00000569288 SPATA31D1Q6ZQQ2 1576 aa13.61□□□□□ -0.23
LINC00555-201ENST00000569288 AEBP2Q6ZN18 517 aaPredicted RBP13.6□□□□□ -0.23
LINC00555-201ENST00000569288 E9PCH4 1651 aa13.59□□□□□ -0.23
LINC00555-201ENST00000569288 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
LINC00555-201ENST00000569288 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.23
LINC00555-201ENST00000569288 CEBPAP49715 358 aaPredicted RBP13.57□□□□□ -0.24
LINC00555-201ENST00000569288 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
LINC00555-201ENST00000569288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC00555-201ENST00000569288 MYO3AQ8NEV4 1616 aa13.57□□□□□ -0.24
LINC00555-201ENST00000569288 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
LINC00555-201ENST00000569288 CCDC144AA2RUR9 1427 aa13.56□□□□□ -0.24
LINC00555-201ENST00000569288 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
LINC00555-201ENST00000569288 UHRF1BP1Q6BDS2 1440 aa13.56□□□□□ -0.24
LINC00555-201ENST00000569288 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
LINC00555-201ENST00000569288 FOXD1Q16676 465 aa13.55□□□□□ -0.24
LINC00555-201ENST00000569288 NOS1P29475 1434 aa13.55□□□□□ -0.24
LINC00555-201ENST00000569288 LMTK3Q96Q04 1460 aa13.54□□□□□ -0.24
LINC00555-201ENST00000569288 NLRP1Q9C000 1473 aa13.54□□□□□ -0.24
LINC00555-201ENST00000569288 SPHKAPQ2M3C7 1700 aa13.53□□□□□ -0.24
LINC00555-201ENST00000569288 TNRQ92752 1358 aa13.52□□□□□ -0.25
LINC00555-201ENST00000569288 CEP170BQ9Y4F5 1589 aaPredicted RBP13.52□□□□□ -0.25
LINC00555-201ENST00000569288 PIK3C2BO00750 1634 aa13.52□□□□□ -0.25
LINC00555-201ENST00000569288 SYNMO15061 1565 aa13.51□□□□□ -0.25
LINC00555-201ENST00000569288 TRPM2O94759 1503 aa13.51□□□□□ -0.25
LINC00555-201ENST00000569288 FBXO31Q5XUX0 539 aaPredicted RBP13.51□□□□□ -0.25
LINC00555-201ENST00000569288 A2ML1A8K2U0 1454 aa13.5□□□□□ -0.25
LINC00555-201ENST00000569288 SLC52A1Q9NWF4 448 aa13.5□□□□□ -0.25
LINC00555-201ENST00000569288 UBR1Q8IWV7 1749 aa13.5□□□□□ -0.25
LINC00555-201ENST00000569288 RPGRIP1LQ68CZ1 1315 aa13.49□□□□□ -0.25
LINC00555-201ENST00000569288 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
LINC00555-201ENST00000569288 UGGT1Q9NYU2 1555 aa13.46□□□□□ -0.25
LINC00555-201ENST00000569288 PLPPR3Q6T4P5 718 aa13.46□□□□□ -0.25
LINC00555-201ENST00000569288 KIF1BO60333 1816 aa13.46□□□□□ -0.26
LINC00555-201ENST00000569288 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
LINC00555-201ENST00000569288 MYO5BQ9ULV0 1848 aa13.45□□□□□ -0.26
LINC00555-201ENST00000569288 STRCQ7RTU9 1775 aa13.45□□□□□ -0.26
LINC00555-201ENST00000569288 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00555-201ENST00000569288 POLR1AO95602 1720 aaPredicted RBP13.44□□□□□ -0.26
LINC00555-201ENST00000569288 TMEM131LA2VDJ0 1609 aa13.43□□□□□ -0.26
LINC00555-201ENST00000569288 ADGRB3O60242 1522 aa13.43□□□□□ -0.26
LINC00555-201ENST00000569288 IDI1Q13907 227 aa13.42□□□□□ -0.26
LINC00555-201ENST00000569288 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms