RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 FAM135AQ9P2D6 1515 aa20.22■□□□□ 0.83
SNX29-207ENST00000568949 TNRQ92752 1358 aa20.22■□□□□ 0.83
SNX29-207ENST00000568949 HSPA1LP34931 641 aa20.22■□□□□ 0.83
SNX29-207ENST00000568949 NEURL4Q96JN8 1562 aa20.21■□□□□ 0.83
SNX29-207ENST00000568949 SHANK2Q9UPX8 1470 aa20.21■□□□□ 0.83
SNX29-207ENST00000568949 PZPP20742 1482 aa20.2■□□□□ 0.82
SNX29-207ENST00000568949 FBXO31Q5XUX0 539 aaPredicted RBP20.19■□□□□ 0.82
SNX29-207ENST00000568949 MED1Q15648 1581 aaPredicted RBP20.19■□□□□ 0.82
SNX29-207ENST00000568949 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
SNX29-207ENST00000568949 EHBP1L1Q8N3D4 1523 aa20.18■□□□□ 0.82
SNX29-207ENST00000568949 KDM5DQ9BY66 1539 aa20.18■□□□□ 0.82
SNX29-207ENST00000568949 KIF3BO15066 747 aa20.18■□□□□ 0.82
SNX29-207ENST00000568949 PIP4K2BP78356 416 aa20.18■□□□□ 0.82
SNX29-207ENST00000568949 ANKLE2Q86XL3 938 aa20.17■□□□□ 0.82
SNX29-207ENST00000568949 CEP162Q5TB80 1403 aa20.17■□□□□ 0.82
SNX29-207ENST00000568949 THEMISQ8N1K5 641 aaPredicted RBP20.16■□□□□ 0.82
SNX29-207ENST00000568949 RSPH4AQ5TD94 716 aa20.15■□□□□ 0.82
SNX29-207ENST00000568949 CCDC141Q6ZP82 1450 aa20.15■□□□□ 0.82
SNX29-207ENST00000568949 VWDEQ8N2E2 1590 aa20.14■□□□□ 0.81
SNX29-207ENST00000568949 NLRP1Q9C000 1473 aa20.14■□□□□ 0.81
SNX29-207ENST00000568949 MIA2Q96PC5 1412 aa20.14■□□□□ 0.81
SNX29-207ENST00000568949 WASHC2CQ9Y4E1 1318 aa20.14■□□□□ 0.81
SNX29-207ENST00000568949 DEPDC5O75140 1603 aa20.13■□□□□ 0.81
SNX29-207ENST00000568949 MED14O60244 1454 aa20.13■□□□□ 0.81
SNX29-207ENST00000568949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNX29-207ENST00000568949 NPHP4O75161 1426 aaPredicted RBP20.11■□□□□ 0.81
SNX29-207ENST00000568949 UGGT1Q9NYU2 1555 aa20.11■□□□□ 0.81
SNX29-207ENST00000568949 CAMSAP2Q08AD1 1489 aa20.09■□□□□ 0.81
SNX29-207ENST00000568949 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
SNX29-207ENST00000568949 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
SNX29-207ENST00000568949 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
SNX29-207ENST00000568949 IQGAP1P46940 1657 aa20.05■□□□□ 0.8
SNX29-207ENST00000568949 ARHGEF5Q12774 1597 aa20.04■□□□□ 0.8
SNX29-207ENST00000568949 TSPY4P0CV99 314 aa20.04■□□□□ 0.8
SNX29-207ENST00000568949 TSPY10P0CW01 314 aa20.04■□□□□ 0.8
SNX29-207ENST00000568949 RNF17Q9BXT8 1623 aaKnown RBP20.01■□□□□ 0.79
SNX29-207ENST00000568949 LRRC7Q96NW7 1537 aa20.01■□□□□ 0.79
SNX29-207ENST00000568949 STRCP1A6NGW2 1772 aa20■□□□□ 0.79
SNX29-207ENST00000568949 ZC3H13Q5T200 1668 aaKnown RBP20■□□□□ 0.79
SNX29-207ENST00000568949 ABCC3O15438 1527 aa20■□□□□ 0.79
SNX29-207ENST00000568949 SYNMO15061 1565 aa20■□□□□ 0.79
SNX29-207ENST00000568949 ERVK-7P63135 1459 aa19.97■□□□□ 0.79
SNX29-207ENST00000568949 MAST1Q9Y2H9 1570 aa19.96■□□□□ 0.79
SNX29-207ENST00000568949 EIF2AK4Q9P2K8 1649 aaKnown RBP19.95■□□□□ 0.78
SNX29-207ENST00000568949 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
SNX29-207ENST00000568949 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
SNX29-207ENST00000568949 MROH1Q8NDA8 1641 aa19.91■□□□□ 0.78
SNX29-207ENST00000568949 CFAP65Q6ZU64 1925 aaKnown RBP19.9■□□□□ 0.78
SNX29-207ENST00000568949 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
SNX29-207ENST00000568949 ARHGAP23Q9P227 1491 aa19.89■□□□□ 0.77
SNX29-207ENST00000568949 CEP152O94986 1710 aa19.88■□□□□ 0.77
SNX29-207ENST00000568949 SLIT1O75093 1534 aa19.88■□□□□ 0.77
SNX29-207ENST00000568949 LTKP29376 864 aa19.87■□□□□ 0.77
SNX29-207ENST00000568949 TXNDC2Q86VQ3 553 aa19.87■□□□□ 0.77
SNX29-207ENST00000568949 LRRC9Q6ZRR7 1453 aa19.86■□□□□ 0.77
SNX29-207ENST00000568949 ARHGAP31Q2M1Z3 1444 aa19.86■□□□□ 0.77
SNX29-207ENST00000568949 DUOX2Q9NRD8 1548 aa19.86■□□□□ 0.77
SNX29-207ENST00000568949 RGS17Q9UGC6 210 aaPredicted RBP19.85■□□□□ 0.77
SNX29-207ENST00000568949 XIRP1Q702N8 1843 aaKnown RBP19.84■□□□□ 0.77
SNX29-207ENST00000568949 EID1Q9Y6B2 187 aa19.84■□□□□ 0.77
SNX29-207ENST00000568949 FAM135BQ49AJ0 1406 aa19.83■□□□□ 0.76
SNX29-207ENST00000568949 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
SNX29-207ENST00000568949 PRDM15P57071 1507 aaPredicted RBP19.81■□□□□ 0.76
SNX29-207ENST00000568949 VPS8Q8N3P4 1428 aa19.79■□□□□ 0.76
SNX29-207ENST00000568949 MAP3K1Q13233 1512 aa19.79■□□□□ 0.76
SNX29-207ENST00000568949 TMEM2Q9UHN6 1383 aa19.79■□□□□ 0.76
SNX29-207ENST00000568949 ERBINQ96RT1 1412 aa19.77■□□□□ 0.76
SNX29-207ENST00000568949 PIK3C2BO00750 1634 aa19.77■□□□□ 0.76
SNX29-207ENST00000568949 KIF15Q9NS87 1388 aa19.77■□□□□ 0.76
SNX29-207ENST00000568949 KDM5AP29375 1690 aaKnown RBP19.76■□□□□ 0.75
SNX29-207ENST00000568949 TMEM94Q12767 1356 aa19.75■□□□□ 0.75
SNX29-207ENST00000568949 KCNA6P17658 529 aa19.75■□□□□ 0.75
SNX29-207ENST00000568949 KANK4Q5T7N3 995 aaPredicted RBP19.75■□□□□ 0.75
SNX29-207ENST00000568949 STAG3Q9UJ98 1225 aa19.74■□□□□ 0.75
SNX29-207ENST00000568949 KANK1Q14678 1352 aa19.72■□□□□ 0.75
SNX29-207ENST00000568949 EFCAB6Q5THR3 1501 aa19.72■□□□□ 0.75
SNX29-207ENST00000568949 ABCC5O15440 1437 aa19.72■□□□□ 0.75
SNX29-207ENST00000568949 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
SNX29-207ENST00000568949 POTEAQ6S8J7 498 aa19.71■□□□□ 0.75
SNX29-207ENST00000568949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.71■□□□□ 0.75
SNX29-207ENST00000568949 CROCC2H7BZ55 1655 aa19.71■□□□□ 0.75
SNX29-207ENST00000568949 TET3O43151 1660 aa19.71■□□□□ 0.75
SNX29-207ENST00000568949 IDI1Q13907 227 aa19.7■□□□□ 0.74
SNX29-207ENST00000568949 PROSER2Q86WR7 435 aaPredicted RBP19.7■□□□□ 0.74
SNX29-207ENST00000568949 ROBO1Q9Y6N7 1651 aa19.7■□□□□ 0.74
SNX29-207ENST00000568949 LMTK2Q8IWU2 1503 aa19.7■□□□□ 0.74
SNX29-207ENST00000568949 NKTRP30414 1462 aaKnown RBP19.67■□□□□ 0.74
SNX29-207ENST00000568949 SLC26A8Q96RN1 970 aa19.66■□□□□ 0.74
SNX29-207ENST00000568949 NWD1Q149M9 1564 aa19.66■□□□□ 0.74
SNX29-207ENST00000568949 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
SNX29-207ENST00000568949 NOS1P29475 1434 aa19.65■□□□□ 0.74
SNX29-207ENST00000568949 DAPK1P53355 1430 aa19.65■□□□□ 0.74
SNX29-207ENST00000568949 ADGRB3O60242 1522 aa19.63■□□□□ 0.73
SNX29-207ENST00000568949 MSH6P52701 1360 aa19.63■□□□□ 0.73
SNX29-207ENST00000568949 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
SNX29-207ENST00000568949 ANKRD30AQ9BXX3 1397 aa19.62■□□□□ 0.73
SNX29-207ENST00000568949 SLC52A1Q9NWF4 448 aa19.62■□□□□ 0.73
SNX29-207ENST00000568949 SLAIN2Q9P270 581 aa19.61■□□□□ 0.73
SNX29-207ENST00000568949 JCADQ9P266 1359 aa19.6■□□□□ 0.73
SNX29-207ENST00000568949 PHLPP1O60346 1717 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms