RNA–Protein interactions for RNA: ENST00000568859.5

SNAP23-221, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-221ENST00000568859 CCNB3Q8WWL7 1395 aa25.7■■□□□ 1.71
SNAP23-221ENST00000568859 THEMISQ8N1K5 641 aaPredicted RBP25.69■■□□□ 1.7
SNAP23-221ENST00000568859 NEURL4Q96JN8 1562 aa25.69■■□□□ 1.7
SNAP23-221ENST00000568859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.64■■□□□ 1.69
SNAP23-221ENST00000568859 FBXO31Q5XUX0 539 aaPredicted RBP25.63■■□□□ 1.69
SNAP23-221ENST00000568859 VWDEQ8N2E2 1590 aa25.63■■□□□ 1.69
SNAP23-221ENST00000568859 PZPP20742 1482 aa25.62■■□□□ 1.69
SNAP23-221ENST00000568859 DHX29Q7Z478 1369 aaKnown RBP25.62■■□□□ 1.69
SNAP23-221ENST00000568859 FAM135AQ9P2D6 1515 aa25.62■■□□□ 1.69
SNAP23-221ENST00000568859 NPHP4O75161 1426 aaPredicted RBP25.62■■□□□ 1.69
SNAP23-221ENST00000568859 RTEL1-TNFRSF6BF6WH68 1400 aa25.61■■□□□ 1.69
SNAP23-221ENST00000568859 MED14O60244 1454 aa25.6■■□□□ 1.69
SNAP23-221ENST00000568859 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
SNAP23-221ENST00000568859 KIF3BO15066 747 aa25.59■■□□□ 1.69
SNAP23-221ENST00000568859 SENP3Q9H4L4 574 aaPredicted RBP25.59■■□□□ 1.69
SNAP23-221ENST00000568859 WASHC2CQ9Y4E1 1318 aa25.59■■□□□ 1.69
SNAP23-221ENST00000568859 KDM5DQ9BY66 1539 aa25.58■■□□□ 1.69
SNAP23-221ENST00000568859 DEPDC5O75140 1603 aa25.58■■□□□ 1.69
SNAP23-221ENST00000568859 MTUS2Q5JR59 1369 aa25.57■■□□□ 1.68
SNAP23-221ENST00000568859 UGGT1Q9NYU2 1555 aa25.57■■□□□ 1.68
SNAP23-221ENST00000568859 MIA2Q96PC5 1412 aa25.56■■□□□ 1.68
SNAP23-221ENST00000568859 ALKQ9UM73 1620 aa25.55■■□□□ 1.68
SNAP23-221ENST00000568859 RNF17Q9BXT8 1623 aaKnown RBP25.52■■□□□ 1.68
SNAP23-221ENST00000568859 MBD5Q9P267 1494 aa25.52■■□□□ 1.68
SNAP23-221ENST00000568859 IQGAP1P46940 1657 aa25.52■■□□□ 1.68
SNAP23-221ENST00000568859 ZNF644Q9H582 1327 aaPredicted RBP25.51■■□□□ 1.67
SNAP23-221ENST00000568859 SYNMO15061 1565 aa25.5■■□□□ 1.67
SNAP23-221ENST00000568859 LRRC7Q96NW7 1537 aa25.5■■□□□ 1.67
SNAP23-221ENST00000568859 RSPH4AQ5TD94 716 aa25.46■■□□□ 1.67
SNAP23-221ENST00000568859 RGS17Q9UGC6 210 aaPredicted RBP25.45■■□□□ 1.66
SNAP23-221ENST00000568859 TIAM1Q13009 1591 aa25.44■■□□□ 1.66
SNAP23-221ENST00000568859 CCDC141Q6ZP82 1450 aa25.43■■□□□ 1.66
SNAP23-221ENST00000568859 STRCP1A6NGW2 1772 aa25.4■■□□□ 1.66
SNAP23-221ENST00000568859 EHBP1L1Q8N3D4 1523 aa25.38■■□□□ 1.65
SNAP23-221ENST00000568859 TSPY4P0CV99 314 aa25.36■■□□□ 1.65
SNAP23-221ENST00000568859 TSPY10P0CW01 314 aa25.36■■□□□ 1.65
SNAP23-221ENST00000568859 CEP162Q5TB80 1403 aa25.36■■□□□ 1.65
SNAP23-221ENST00000568859 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
SNAP23-221ENST00000568859 SCAF11Q99590 1463 aaKnown RBP25.33■■□□□ 1.65
SNAP23-221ENST00000568859 FAM135BQ49AJ0 1406 aa25.31■■□□□ 1.64
SNAP23-221ENST00000568859 POTEAQ6S8J7 498 aa25.31■■□□□ 1.64
SNAP23-221ENST00000568859 CAMSAP2Q08AD1 1489 aa25.31■■□□□ 1.64
SNAP23-221ENST00000568859 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
SNAP23-221ENST00000568859 ERVK-7P63135 1459 aa25.29■■□□□ 1.64
SNAP23-221ENST00000568859 ABCC3O15438 1527 aa25.28■■□□□ 1.64
SNAP23-221ENST00000568859 TXNDC2Q86VQ3 553 aa25.28■■□□□ 1.64
SNAP23-221ENST00000568859 EID1Q9Y6B2 187 aa25.28■■□□□ 1.64
SNAP23-221ENST00000568859 UBR1Q8IWV7 1749 aa25.23■■□□□ 1.63
SNAP23-221ENST00000568859 ARHGEF5Q12774 1597 aa25.23■■□□□ 1.63
SNAP23-221ENST00000568859 LTKP29376 864 aa25.22■■□□□ 1.63
SNAP23-221ENST00000568859 SLIT1O75093 1534 aa25.21■■□□□ 1.63
SNAP23-221ENST00000568859 ARHGAP23Q9P227 1491 aa25.21■■□□□ 1.63
SNAP23-221ENST00000568859 NCOA2Q15596 1464 aa25.2■■□□□ 1.62
SNAP23-221ENST00000568859 XIRP1Q702N8 1843 aaKnown RBP25.18■■□□□ 1.62
SNAP23-221ENST00000568859 EIF2AK4Q9P2K8 1649 aaKnown RBP25.18■■□□□ 1.62
SNAP23-221ENST00000568859 TMEM94Q12767 1356 aa25.17■■□□□ 1.62
SNAP23-221ENST00000568859 LRRC9Q6ZRR7 1453 aa25.15■■□□□ 1.62
SNAP23-221ENST00000568859 STAG3Q9UJ98 1225 aa25.15■■□□□ 1.62
SNAP23-221ENST00000568859 CFAP65Q6ZU64 1925 aaKnown RBP25.14■■□□□ 1.61
SNAP23-221ENST00000568859 ROBO1Q9Y6N7 1651 aa25.13■■□□□ 1.61
SNAP23-221ENST00000568859 KCNA6P17658 529 aa25.13■■□□□ 1.61
SNAP23-221ENST00000568859 PROSER2Q86WR7 435 aaPredicted RBP25.13■■□□□ 1.61
SNAP23-221ENST00000568859 MAST1Q9Y2H9 1570 aa25.11■■□□□ 1.61
SNAP23-221ENST00000568859 TMEM2Q9UHN6 1383 aa25.1■■□□□ 1.61
SNAP23-221ENST00000568859 CEP152O94986 1710 aa25.1■■□□□ 1.61
SNAP23-221ENST00000568859 ARHGAP31Q2M1Z3 1444 aa25.1■■□□□ 1.61
SNAP23-221ENST00000568859 JCADQ9P266 1359 aa25.09■■□□□ 1.61
SNAP23-221ENST00000568859 MROH1Q8NDA8 1641 aa25.08■■□□□ 1.61
SNAP23-221ENST00000568859 SETD1AO15047 1707 aaKnown RBP25.07■■□□□ 1.6
SNAP23-221ENST00000568859 MSH6P52701 1360 aa25.06■■□□□ 1.6
SNAP23-221ENST00000568859 DUOX2Q9NRD8 1548 aa25.04■■□□□ 1.6
SNAP23-221ENST00000568859 MAP3K1Q13233 1512 aa25.03■■□□□ 1.6
SNAP23-221ENST00000568859 SLAIN2Q9P270 581 aa25.03■■□□□ 1.6
SNAP23-221ENST00000568859 NKTRP30414 1462 aaKnown RBP25.02■■□□□ 1.6
SNAP23-221ENST00000568859 PRDM15P57071 1507 aaPredicted RBP25.02■■□□□ 1.6
SNAP23-221ENST00000568859 ZNF772Q68DY9 489 aaPredicted RBP25.02■■□□□ 1.6
SNAP23-221ENST00000568859 SLC26A8Q96RN1 970 aa25.02■■□□□ 1.6
SNAP23-221ENST00000568859 PIK3C2BO00750 1634 aa25.01■■□□□ 1.59
SNAP23-221ENST00000568859 PHLPP1O60346 1717 aa25.01■■□□□ 1.59
SNAP23-221ENST00000568859 MEX3CQ5U5Q3 659 aaKnown RBP25.01■■□□□ 1.59
SNAP23-221ENST00000568859 UPF1Q92900 1129 aaKnown RBP eCLIP25.01■■□□□ 1.59
SNAP23-221ENST00000568859 EFCAB6Q5THR3 1501 aa25.01■■□□□ 1.59
SNAP23-221ENST00000568859 RBM33Q96EV2 1170 aaKnown RBP25■■□□□ 1.59
SNAP23-221ENST00000568859 KANK1Q14678 1352 aa24.99■■□□□ 1.59
SNAP23-221ENST00000568859 KDM5AP29375 1690 aaKnown RBP24.98■■□□□ 1.59
SNAP23-221ENST00000568859 SPATA31A6Q5VVP1 1343 aa24.98■■□□□ 1.59
SNAP23-221ENST00000568859 BCANQ96GW7 911 aa24.98■■□□□ 1.59
SNAP23-221ENST00000568859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.96■■□□□ 1.593e-7■□□□□ 10.2
SNAP23-221ENST00000568859 MYOM3Q5VTT5 1437 aa24.95■■□□□ 1.59
SNAP23-221ENST00000568859 ERBINQ96RT1 1412 aa24.95■■□□□ 1.59
SNAP23-221ENST00000568859 TRIM52Q96A61 297 aa24.95■■□□□ 1.58
SNAP23-221ENST00000568859 TET3O43151 1660 aa24.94■■□□□ 1.58
SNAP23-221ENST00000568859 KIF15Q9NS87 1388 aa24.94■■□□□ 1.58
SNAP23-221ENST00000568859 IDI1Q13907 227 aa24.94■■□□□ 1.58
SNAP23-221ENST00000568859 NWD1Q149M9 1564 aa24.93■■□□□ 1.58
SNAP23-221ENST00000568859 FGD6Q6ZV73 1430 aa24.93■■□□□ 1.58
SNAP23-221ENST00000568859 RXRBP28702 533 aa24.89■■□□□ 1.58
SNAP23-221ENST00000568859 RRP7BPQ9NSQ0 103 aa24.89■■□□□ 1.58
SNAP23-221ENST00000568859 COL16A1Q07092 1604 aaPredicted RBP24.87■■□□□ 1.57
SNAP23-221ENST00000568859 HDGFP51858 240 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms