RNA–Protein interactions for RNA: ENST00000568670.5

FANCI-215, Transcript of FA complementation group I, human

TSL 3

Gene FANCI, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCI-215	ENST00000568670	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.39	□□□□□ -0.59
FANCI-215	ENST00000568670	CPS1	P31327	1500 aa		11.38	□□□□□ -0.59
FANCI-215	ENST00000568670	EEA1	Q15075	1411 aa		11.37	□□□□□ -0.59
FANCI-215	ENST00000568670	PTPRK	Q15262	1439 aa		11.37	□□□□□ -0.59
FANCI-215	ENST00000568670	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.37	□□□□□ -0.59
FANCI-215	ENST00000568670	NEURL4	Q96JN8	1562 aa		11.37	□□□□□ -0.59
FANCI-215	ENST00000568670	SYCP2	Q9BX26	1530 aa		11.36	□□□□□ -0.59
FANCI-215	ENST00000568670	SHANK2	Q9UPX8	1470 aa		11.36	□□□□□ -0.59
FANCI-215	ENST00000568670	ATP7A	Q04656	1500 aa		11.35	□□□□□ -0.59
FANCI-215	ENST00000568670	GGT6	Q6P531	493 aa		11.35	□□□□□ -0.59
FANCI-215	ENST00000568670	ARHGAP35	Q9NRY4	1499 aa		11.35	□□□□□ -0.59
FANCI-215	ENST00000568670	ADGB	Q8N7X0	1667 aa		11.35	□□□□□ -0.59
FANCI-215	ENST00000568670	STRCP1	A6NGW2	1772 aa		11.35	□□□□□ -0.59
FANCI-215	ENST00000568670	PLXNC1	O60486	1568 aa		11.34	□□□□□ -0.59
FANCI-215	ENST00000568670	A2ML1	A8K2U0	1454 aa		11.34	□□□□□ -0.59
FANCI-215	ENST00000568670	ALK	Q9UM73	1620 aa		11.34	□□□□□ -0.59
FANCI-215	ENST00000568670	SPAG9	O60271	1321 aa	Known RBP	11.34	□□□□□ -0.59
FANCI-215	ENST00000568670	INO80	Q9ULG1	1556 aa	Predicted RBP	11.33	□□□□□ -0.6
FANCI-215	ENST00000568670	UBTF	P17480	764 aa	Known RBP	11.33	□□□□□ -0.6
FANCI-215	ENST00000568670	CFAP65	Q6ZU64	1925 aa	Known RBP	11.32	□□□□□ -0.6
FANCI-215	ENST00000568670	VWDE	Q8N2E2	1590 aa		11.32	□□□□□ -0.6
FANCI-215	ENST00000568670	A2M	P01023	1474 aa		11.32	□□□□□ -0.6
FANCI-215	ENST00000568670	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.31	□□□□□ -0.6	2e-6	■■■■□ 19.7
FANCI-215	ENST00000568670	SETD1A	O15047	1707 aa	Known RBP	11.31	□□□□□ -0.6
FANCI-215	ENST00000568670	IQGAP1	P46940	1657 aa		11.3	□□□□□ -0.6
FANCI-215	ENST00000568670	RBM42	Q9BTD8	480 aa	Known RBP	11.3	□□□□□ -0.6
FANCI-215	ENST00000568670	RNF17	Q9BXT8	1623 aa	Known RBP	11.3	□□□□□ -0.6
FANCI-215	ENST00000568670	XIRP1	Q702N8	1843 aa	Known RBP	11.28	□□□□□ -0.6
FANCI-215	ENST00000568670	CCDC18	Q5T9S5	1454 aa		11.28	□□□□□ -0.6
FANCI-215	ENST00000568670	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
FANCI-215	ENST00000568670	RGS17	Q9UGC6	210 aa	Predicted RBP	11.27	□□□□□ -0.61
FANCI-215	ENST00000568670	SYNM	O15061	1565 aa		11.27	□□□□□ -0.61
FANCI-215	ENST00000568670	DEPDC5	O75140	1603 aa		11.27	□□□□□ -0.61
FANCI-215	ENST00000568670	TNR	Q92752	1358 aa		11.27	□□□□□ -0.61
FANCI-215	ENST00000568670	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.26	□□□□□ -0.61
FANCI-215	ENST00000568670	ANKLE2	Q86XL3	938 aa		11.26	□□□□□ -0.61
FANCI-215	ENST00000568670	CHRDL2	Q6WN34	429 aa		11.25	□□□□□ -0.61
FANCI-215	ENST00000568670	NPHP4	O75161	1426 aa	Predicted RBP	11.25	□□□□□ -0.61
FANCI-215	ENST00000568670	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.25	□□□□□ -0.61
FANCI-215	ENST00000568670	UGGT1	Q9NYU2	1555 aa		11.24	□□□□□ -0.61
FANCI-215	ENST00000568670	LRRC7	Q96NW7	1537 aa		11.24	□□□□□ -0.61
FANCI-215	ENST00000568670	CASKIN1	Q8WXD9	1431 aa		11.23	□□□□□ -0.61
FANCI-215	ENST00000568670	PLEKHH2	Q8IVE3	1493 aa		11.23	□□□□□ -0.61
FANCI-215	ENST00000568670	ZC3H13	Q5T200	1668 aa	Known RBP	11.22	□□□□□ -0.61
FANCI-215	ENST00000568670	KDM5D	Q9BY66	1539 aa		11.21	□□□□□ -0.61
FANCI-215	ENST00000568670	FAM135A	Q9P2D6	1515 aa		11.21	□□□□□ -0.61
FANCI-215	ENST00000568670	MED14	O60244	1454 aa		11.21	□□□□□ -0.61
FANCI-215	ENST00000568670	PZP	P20742	1482 aa		11.21	□□□□□ -0.61
FANCI-215	ENST00000568670	POTEA	Q6S8J7	498 aa		11.21	□□□□□ -0.61
FANCI-215	ENST00000568670	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.21	□□□□□ -0.61
FANCI-215	ENST00000568670	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.21	□□□□□ -0.61
FANCI-215	ENST00000568670	KIAA1107	Q9UPP5	1409 aa		11.2	□□□□□ -0.62
FANCI-215	ENST00000568670	SLC4A2	P04920	1241 aa		11.2	□□□□□ -0.62
FANCI-215	ENST00000568670	KIF3B	O15066	747 aa		11.19	□□□□□ -0.62
FANCI-215	ENST00000568670	NLRP1	Q9C000	1473 aa		11.19	□□□□□ -0.62
FANCI-215	ENST00000568670	CCNB3	Q8WWL7	1395 aa		11.18	□□□□□ -0.62
FANCI-215	ENST00000568670	FYCO1	Q9BQS8	1478 aa		11.18	□□□□□ -0.62
FANCI-215	ENST00000568670	UBR1	Q8IWV7	1749 aa		11.18	□□□□□ -0.62
FANCI-215	ENST00000568670	WASHC2C	Q9Y4E1	1318 aa		11.17	□□□□□ -0.62
FANCI-215	ENST00000568670	CEP152	O94986	1710 aa		11.17	□□□□□ -0.62
FANCI-215	ENST00000568670	ROBO1	Q9Y6N7	1651 aa		11.17	□□□□□ -0.62
FANCI-215	ENST00000568670	MIA2	Q96PC5	1412 aa		11.17	□□□□□ -0.62
FANCI-215	ENST00000568670	ZNF644	Q9H582	1327 aa	Predicted RBP	11.16	□□□□□ -0.62
FANCI-215	ENST00000568670	TIAM1	Q13009	1591 aa		11.16	□□□□□ -0.62
FANCI-215	ENST00000568670	DHX29	Q7Z478	1369 aa	Known RBP	11.16	□□□□□ -0.62
FANCI-215	ENST00000568670	PHLPP1	O60346	1717 aa		11.15	□□□□□ -0.63
FANCI-215	ENST00000568670	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.13	□□□□□ -0.63
FANCI-215	ENST00000568670	SP7	Q8TDD2	431 aa	Predicted RBP	11.13	□□□□□ -0.63
FANCI-215	ENST00000568670	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.12	□□□□□ -0.63
FANCI-215	ENST00000568670	MTUS2	Q5JR59	1369 aa		11.12	□□□□□ -0.63
FANCI-215	ENST00000568670	MBD5	Q9P267	1494 aa		11.12	□□□□□ -0.63
FANCI-215	ENST00000568670	FAM135B	Q49AJ0	1406 aa		11.09	□□□□□ -0.63
FANCI-215	ENST00000568670	CCDC141	Q6ZP82	1450 aa		11.09	□□□□□ -0.63
FANCI-215	ENST00000568670	SCAF11	Q99590	1463 aa	Known RBP	11.09	□□□□□ -0.63
FANCI-215	ENST00000568670	ERVK-7	P63135	1459 aa		11.08	□□□□□ -0.64
FANCI-215	ENST00000568670	ABCC3	O15438	1527 aa		11.08	□□□□□ -0.64
FANCI-215	ENST00000568670	EHBP1L1	Q8N3D4	1523 aa		11.07	□□□□□ -0.64
FANCI-215	ENST00000568670	CAMSAP2	Q08AD1	1489 aa		11.06	□□□□□ -0.64
FANCI-215	ENST00000568670	PIK3C2B	O00750	1634 aa		11.06	□□□□□ -0.64
FANCI-215	ENST00000568670	LTK	P29376	864 aa		11.06	□□□□□ -0.64
FANCI-215	ENST00000568670	TXNDC2	Q86VQ3	553 aa		11.06	□□□□□ -0.64
FANCI-215	ENST00000568670	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
FANCI-215	ENST00000568670	TRIM52	Q96A61	297 aa		11.06	□□□□□ -0.64
FANCI-215	ENST00000568670	NCOA2	Q15596	1464 aa		11.06	□□□□□ -0.64
FANCI-215	ENST00000568670	RBM33	Q96EV2	1170 aa	Known RBP	11.05	□□□□□ -0.64
FANCI-215	ENST00000568670	SLIT1	O75093	1534 aa		11.04	□□□□□ -0.64
FANCI-215	ENST00000568670	TMEM94	Q12767	1356 aa		11.04	□□□□□ -0.64
FANCI-215	ENST00000568670	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.04	□□□□□ -0.64
FANCI-215	ENST00000568670	MAP3K1	Q13233	1512 aa		11.04	□□□□□ -0.64
FANCI-215	ENST00000568670	MROH1	Q8NDA8	1641 aa		11.03	□□□□□ -0.64
FANCI-215	ENST00000568670	EID1	Q9Y6B2	187 aa		11.03	□□□□□ -0.64
FANCI-215	ENST00000568670	LRRC9	Q6ZRR7	1453 aa		11.03	□□□□□ -0.64
FANCI-215	ENST00000568670	ARHGAP23	Q9P227	1491 aa		11.03	□□□□□ -0.64
FANCI-215	ENST00000568670	ARHGEF5	Q12774	1597 aa		11.03	□□□□□ -0.64
FANCI-215	ENST00000568670	COL16A1	Q07092	1604 aa	Predicted RBP	11.02	□□□□□ -0.64
FANCI-215	ENST00000568670	MEX3C	Q5U5Q3	659 aa	Known RBP	11.02	□□□□□ -0.65
FANCI-215	ENST00000568670	PROSER2	Q86WR7	435 aa	Predicted RBP	11.02	□□□□□ -0.65
FANCI-215	ENST00000568670	MYO5B	Q9ULV0	1848 aa		11.02	□□□□□ -0.65
FANCI-215	ENST00000568670	JCAD	Q9P266	1359 aa		11.02	□□□□□ -0.65
FANCI-215	ENST00000568670	TSPY4	P0CV99	314 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms