RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 RSPH4AQ5TD94 716 aa10.13□□□□□ -0.79
PTPN9-205ENST00000568108 FBXO31Q5XUX0 539 aaPredicted RBP10.13□□□□□ -0.79
PTPN9-205ENST00000568108 CEP170BQ9Y4F5 1589 aaPredicted RBP10.13□□□□□ -0.79
PTPN9-205ENST00000568108 MYO3AQ8NEV4 1616 aa10.12□□□□□ -0.79
PTPN9-205ENST00000568108 SPATA31D1Q6ZQQ2 1576 aa10.12□□□□□ -0.79
PTPN9-205ENST00000568108 ADGBQ8N7X0 1667 aa10.12□□□□□ -0.79
PTPN9-205ENST00000568108 WASHC2CQ9Y4E1 1318 aa10.11□□□□□ -0.79
PTPN9-205ENST00000568108 TIAM1Q13009 1591 aa10.11□□□□□ -0.79
PTPN9-205ENST00000568108 CEP162Q5TB80 1403 aa10.11□□□□□ -0.79
PTPN9-205ENST00000568108 ZNF142P52746 1687 aaPredicted RBP10.11□□□□□ -0.79
PTPN9-205ENST00000568108 A2ML1A8K2U0 1454 aa10.1□□□□□ -0.79
PTPN9-205ENST00000568108 EHBP1L1Q8N3D4 1523 aa10.1□□□□□ -0.79
PTPN9-205ENST00000568108 TNRQ92752 1358 aa10.1□□□□□ -0.79
PTPN9-205ENST00000568108 TSPY4P0CV99 314 aa10.09□□□□□ -0.79
PTPN9-205ENST00000568108 TSPY10P0CW01 314 aa10.09□□□□□ -0.79
PTPN9-205ENST00000568108 ANKLE2Q86XL3 938 aa10.09□□□□□ -0.79
PTPN9-205ENST00000568108 THEMISQ8N1K5 641 aaPredicted RBP10.09□□□□□ -0.79
PTPN9-205ENST00000568108 SCAF1Q9H7N4 1312 aaKnown RBP10.08□□□□□ -0.8
PTPN9-205ENST00000568108 DNMT1P26358 1616 aaKnown RBP10.08□□□□□ -0.8
PTPN9-205ENST00000568108 TOM1O60784 492 aa10.08□□□□□ -0.8
PTPN9-205ENST00000568108 PIP4K2BP78356 416 aa10.08□□□□□ -0.8
PTPN9-205ENST00000568108 NCOA2Q15596 1464 aa10.07□□□□□ -0.8
PTPN9-205ENST00000568108 CCDC141Q6ZP82 1450 aa10.07□□□□□ -0.8
PTPN9-205ENST00000568108 MIA2Q96PC5 1412 aa10.07□□□□□ -0.8
PTPN9-205ENST00000568108 PZPP20742 1482 aa10.06□□□□□ -0.8
PTPN9-205ENST00000568108 CAMSAP2Q08AD1 1489 aa10.06□□□□□ -0.8
PTPN9-205ENST00000568108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.06□□□□□ -0.8
PTPN9-205ENST00000568108 HSPA1LP34931 641 aa10.06□□□□□ -0.8
PTPN9-205ENST00000568108 SHANK2Q9UPX8 1470 aa10.05□□□□□ -0.8
PTPN9-205ENST00000568108 KDM5DQ9BY66 1539 aa10.05□□□□□ -0.8
PTPN9-205ENST00000568108 CNKSR2Q8WXI2 1034 aa10.04□□□□□ -0.8
PTPN9-205ENST00000568108 CPS1P31327 1500 aa10.03□□□□□ -0.8
PTPN9-205ENST00000568108 FAM135AQ9P2D6 1515 aa10.03□□□□□ -0.8
PTPN9-205ENST00000568108 NLRP1Q9C000 1473 aa10.03□□□□□ -0.8
PTPN9-205ENST00000568108 NEURL4Q96JN8 1562 aa10.02□□□□□ -0.81
PTPN9-205ENST00000568108 UGGT1Q9NYU2 1555 aa10.02□□□□□ -0.81
PTPN9-205ENST00000568108 NPHP4O75161 1426 aaPredicted RBP10.02□□□□□ -0.81
PTPN9-205ENST00000568108 ARHGEF5Q12774 1597 aa10.01□□□□□ -0.81
PTPN9-205ENST00000568108 POLR1AO95602 1720 aaPredicted RBP10.01□□□□□ -0.81
PTPN9-205ENST00000568108 MED14O60244 1454 aa10□□□□□ -0.81
PTPN9-205ENST00000568108 LOC105371045A0A1W2PR82 267 aa10□□□□□ -0.81
PTPN9-205ENST00000568108 LRRC9Q6ZRR7 1453 aa9.99□□□□□ -0.81
PTPN9-205ENST00000568108 KANK4Q5T7N3 995 aaPredicted RBP9.99□□□□□ -0.81
PTPN9-205ENST00000568108 VWDEQ8N2E2 1590 aa9.99□□□□□ -0.81
PTPN9-205ENST00000568108 ABCC3O15438 1527 aa9.97□□□□□ -0.81
PTPN9-205ENST00000568108 DEPDC5O75140 1603 aa9.97□□□□□ -0.81
PTPN9-205ENST00000568108 TXNDC2Q86VQ3 553 aa9.97□□□□□ -0.81
PTPN9-205ENST00000568108 VPS8Q8N3P4 1428 aa9.97□□□□□ -0.81
PTPN9-205ENST00000568108 ERVK-7P63135 1459 aa9.97□□□□□ -0.81
PTPN9-205ENST00000568108 MED1Q15648 1581 aaPredicted RBP9.96□□□□□ -0.82
PTPN9-205ENST00000568108 RNF17Q9BXT8 1623 aaKnown RBP9.96□□□□□ -0.82
PTPN9-205ENST00000568108 LTKP29376 864 aa9.95□□□□□ -0.82
PTPN9-205ENST00000568108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.95□□□□□ -0.82
PTPN9-205ENST00000568108 RRP7BPQ9NSQ0 103 aa9.95□□□□□ -0.82
PTPN9-205ENST00000568108 MYOM3Q5VTT5 1437 aa9.95□□□□□ -0.82
PTPN9-205ENST00000568108 LRRC7Q96NW7 1537 aa9.95□□□□□ -0.82
PTPN9-205ENST00000568108 MAST1Q9Y2H9 1570 aa9.95□□□□□ -0.82
PTPN9-205ENST00000568108 IQGAP1P46940 1657 aa9.95□□□□□ -0.82
PTPN9-205ENST00000568108 CFAP65Q6ZU64 1925 aaKnown RBP9.94□□□□□ -0.82
PTPN9-205ENST00000568108 ALKQ9UM73 1620 aa9.94□□□□□ -0.82
PTPN9-205ENST00000568108 EID1Q9Y6B2 187 aa9.94□□□□□ -0.82
PTPN9-205ENST00000568108 ZC3H13Q5T200 1668 aaKnown RBP9.93□□□□□ -0.82
PTPN9-205ENST00000568108 EIF2AK4Q9P2K8 1649 aaKnown RBP9.93□□□□□ -0.82
PTPN9-205ENST00000568108 DUOX2Q9NRD8 1548 aa9.93□□□□□ -0.82
PTPN9-205ENST00000568108 KIF15Q9NS87 1388 aa9.93□□□□□ -0.82
PTPN9-205ENST00000568108 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
PTPN9-205ENST00000568108 MROH1Q8NDA8 1641 aa9.93□□□□□ -0.82
PTPN9-205ENST00000568108 MAP3K1Q13233 1512 aa9.92□□□□□ -0.82
PTPN9-205ENST00000568108 SCAF11Q99590 1463 aaKnown RBP9.92□□□□□ -0.82
PTPN9-205ENST00000568108 APLP2Q06481 763 aa9.92□□□□□ -0.82
PTPN9-205ENST00000568108 STRCP1A6NGW2 1772 aa9.92□□□□□ -0.82
PTPN9-205ENST00000568108 ABCC5O15440 1437 aa9.91□□□□□ -0.82
PTPN9-205ENST00000568108 ARHGAP31Q2M1Z3 1444 aa9.9□□□□□ -0.82
PTPN9-205ENST00000568108 CEP152O94986 1710 aa9.9□□□□□ -0.82
PTPN9-205ENST00000568108 UBR1Q8IWV7 1749 aa9.9□□□□□ -0.82
PTPN9-205ENST00000568108 KANK1Q14678 1352 aa9.9□□□□□ -0.82
PTPN9-205ENST00000568108 MSH5O43196 834 aa9.9□□□□□ -0.82
PTPN9-205ENST00000568108 IDI1Q13907 227 aa9.9□□□□□ -0.82
PTPN9-205ENST00000568108 ARHGAP23Q9P227 1491 aa9.9□□□□□ -0.83
PTPN9-205ENST00000568108 ERBINQ96RT1 1412 aa9.9□□□□□ -0.83
PTPN9-205ENST00000568108 TMEM2Q9UHN6 1383 aa9.89□□□□□ -0.83
PTPN9-205ENST00000568108 SLIT1O75093 1534 aa9.89□□□□□ -0.83
PTPN9-205ENST00000568108 CHIC2Q9UKJ5 165 aa9.89□□□□□ -0.83
PTPN9-205ENST00000568108 SYNMO15061 1565 aa9.88□□□□□ -0.83
PTPN9-205ENST00000568108 ZBTB22O15209 634 aa9.88□□□□□ -0.83
PTPN9-205ENST00000568108 KCNA6P17658 529 aa9.88□□□□□ -0.83
PTPN9-205ENST00000568108 PROSER2Q86WR7 435 aaPredicted RBP9.87□□□□□ -0.83
PTPN9-205ENST00000568108 SLC26A8Q96RN1 970 aa9.87□□□□□ -0.83
PTPN9-205ENST00000568108 DAPK1P53355 1430 aa9.87□□□□□ -0.83
PTPN9-205ENST00000568108 ANKRD30AQ9BXX3 1397 aa9.87□□□□□ -0.83
PTPN9-205ENST00000568108 PRDM15P57071 1507 aaPredicted RBP9.87□□□□□ -0.83
PTPN9-205ENST00000568108 FAM135BQ49AJ0 1406 aa9.86□□□□□ -0.83
PTPN9-205ENST00000568108 RBM33Q96EV2 1170 aaKnown RBP9.86□□□□□ -0.83
PTPN9-205ENST00000568108 BCANQ96GW7 911 aa9.86□□□□□ -0.83
PTPN9-205ENST00000568108 RGS17Q9UGC6 210 aaPredicted RBP9.86□□□□□ -0.83
PTPN9-205ENST00000568108 TMEM94Q12767 1356 aa9.86□□□□□ -0.83
PTPN9-205ENST00000568108 PTPN23Q9H3S7 1636 aa9.85□□□□□ -0.83
PTPN9-205ENST00000568108 PIK3C2BO00750 1634 aa9.85□□□□□ -0.83
PTPN9-205ENST00000568108 FGD6Q6ZV73 1430 aa9.84□□□□□ -0.83
PTPN9-205ENST00000568108 EFCAB6Q5THR3 1501 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 550.3 ms