RNA–Protein interactions for RNA: ENST00000568097.1

HERC2P4-206, Transcript of hect domain and RLD 2 pseudogene 4, humanhuman

TSL 5 BASIC

Gene HERC2P4, Length 1,062 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P4-206ENST00000568097 FBXO31Q5XUX0 539 aaPredicted RBP34.12■■■■□ 3.05
HERC2P4-206ENST00000568097 MYO3AQ8NEV4 1616 aa34.11■■■■□ 3.05
HERC2P4-206ENST00000568097 WASHC2CQ9Y4E1 1318 aa34.09■■■■□ 3.05
HERC2P4-206ENST00000568097 FAM135AQ9P2D6 1515 aa34.09■■■■□ 3.05
HERC2P4-206ENST00000568097 CAMSAP1Q5T5Y3 1602 aa34.08■■■■□ 3.05
HERC2P4-206ENST00000568097 SHANK2Q9UPX8 1470 aa34.07■■■■□ 3.05
HERC2P4-206ENST00000568097 PTPRTO14522 1441 aa34.07■■■■□ 3.04
HERC2P4-206ENST00000568097 DMRT2Q9Y5R5 561 aa34.07■■■■□ 3.04
HERC2P4-206ENST00000568097 RNF17Q9BXT8 1623 aaKnown RBP34.07■■■■□ 3.04
HERC2P4-206ENST00000568097 PZPP20742 1482 aa34.07■■■■□ 3.04
HERC2P4-206ENST00000568097 DAPK1P53355 1430 aa34.06■■■■□ 3.04
HERC2P4-206ENST00000568097 CEP170BQ9Y4F5 1589 aaPredicted RBP34.06■■■■□ 3.04
HERC2P4-206ENST00000568097 ZNF142P52746 1687 aaPredicted RBP34.05■■■■□ 3.04
HERC2P4-206ENST00000568097 MROH1Q8NDA8 1641 aa34.04■■■■□ 3.04
HERC2P4-206ENST00000568097 CERKQ8TCT0 537 aa34.03■■■■□ 3.04
HERC2P4-206ENST00000568097 CROCC2H7BZ55 1655 aa34.03■■■■□ 3.04
HERC2P4-206ENST00000568097 KIF15Q9NS87 1388 aa34.02■■■■□ 3.04
HERC2P4-206ENST00000568097 DUOX2Q9NRD8 1548 aa34.02■■■■□ 3.04
HERC2P4-206ENST00000568097 DNMT1P26358 1616 aaKnown RBP34.01■■■■□ 3.04
HERC2P4-206ENST00000568097 ABCC3O15438 1527 aa34.01■■■■□ 3.04
HERC2P4-206ENST00000568097 NCKAP5LQ9HCH0 1330 aa34.01■■■■□ 3.03
HERC2P4-206ENST00000568097 EIF2AK4Q9P2K8 1649 aaKnown RBP34.01■■■■□ 3.03
HERC2P4-206ENST00000568097 TNRQ92752 1358 aa34■■■■□ 3.03
HERC2P4-206ENST00000568097 RRP7BPQ9NSQ0 103 aa34■■■■□ 3.03
HERC2P4-206ENST00000568097 A2ML1A8K2U0 1454 aa33.98■■■■□ 3.03
HERC2P4-206ENST00000568097 PLA2R1Q13018 1463 aa33.95■■■■□ 3.03
HERC2P4-206ENST00000568097 CHIC2Q9UKJ5 165 aa33.93■■■■□ 3.02
HERC2P4-206ENST00000568097 ERBINQ96RT1 1412 aa33.92■■■■□ 3.02
HERC2P4-206ENST00000568097 LTBP4Q8N2S1 1624 aa33.88■■■■□ 3.01
HERC2P4-206ENST00000568097 ZC3H13Q5T200 1668 aaKnown RBP33.87■■■■□ 3.01
HERC2P4-206ENST00000568097 PKD2Q13563 968 aa33.87■■■■□ 3.01
HERC2P4-206ENST00000568097 PRDM15P57071 1507 aaPredicted RBP33.86■■■■□ 3.01
HERC2P4-206ENST00000568097 FAM50AQ14320 339 aaKnown RBP33.85■■■■□ 3.01
HERC2P4-206ENST00000568097 ANKRD30AQ9BXX3 1397 aa33.85■■■■□ 3.01
HERC2P4-206ENST00000568097 SPATA31D1Q6ZQQ2 1576 aa33.84■■■■□ 3.01
HERC2P4-206ENST00000568097 ERVK-7P63135 1459 aa33.83■■■■□ 3.01
HERC2P4-206ENST00000568097 NLRP1Q9C000 1473 aa33.82■■■■□ 3.01
HERC2P4-206ENST00000568097 CEP152O94986 1710 aa33.82■■■■□ 3
HERC2P4-206ENST00000568097 ADGRL2O95490 1459 aa33.82■■■■□ 3
HERC2P4-206ENST00000568097 DEPDC5O75140 1603 aa33.79■■■■□ 3
HERC2P4-206ENST00000568097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.78■■■■□ 3
HERC2P4-206ENST00000568097 ZNF335Q9H4Z2 1342 aaPredicted RBP33.78■■■■□ 3
HERC2P4-206ENST00000568097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.77■■■■□ 3
HERC2P4-206ENST00000568097 PPARGC1BQ86YN6 1023 aaKnown RBP33.76■■■□□ 2.99
HERC2P4-206ENST00000568097 NEURL4Q96JN8 1562 aa33.76■■■□□ 2.99
HERC2P4-206ENST00000568097 ARHGAP31Q2M1Z3 1444 aa33.75■■■□□ 2.99
HERC2P4-206ENST00000568097 UGGT1Q9NYU2 1555 aa33.74■■■□□ 2.99
HERC2P4-206ENST00000568097 VWDEQ8N2E2 1590 aa33.72■■■□□ 2.99
HERC2P4-206ENST00000568097 THEMISQ8N1K5 641 aaPredicted RBP33.71■■■□□ 2.99
HERC2P4-206ENST00000568097 LMTK2Q8IWU2 1503 aa33.68■■■□□ 2.98
HERC2P4-206ENST00000568097 KANK1Q14678 1352 aa33.65■■■□□ 2.98
HERC2P4-206ENST00000568097 ANKLE2Q86XL3 938 aa33.65■■■□□ 2.98
HERC2P4-206ENST00000568097 ANKRD50Q9ULJ7 1429 aa33.64■■■□□ 2.98
HERC2P4-206ENST00000568097 POLR1AO95602 1720 aaPredicted RBP33.63■■■□□ 2.97
HERC2P4-206ENST00000568097 MED14O60244 1454 aa33.61■■■□□ 2.97
HERC2P4-206ENST00000568097 IQSEC2Q5JU85 1478 aa33.6■■■□□ 2.97
HERC2P4-206ENST00000568097 CFAP65Q6ZU64 1925 aaKnown RBP33.59■■■□□ 2.97
HERC2P4-206ENST00000568097 NPHP4O75161 1426 aaPredicted RBP33.58■■■□□ 2.97
HERC2P4-206ENST00000568097 UBR1Q8IWV7 1749 aa33.56■■■□□ 2.96
HERC2P4-206ENST00000568097 EFCAB6Q5THR3 1501 aa33.55■■■□□ 2.96
HERC2P4-206ENST00000568097 ROCK1Q13464 1354 aa33.55■■■□□ 2.96
HERC2P4-206ENST00000568097 NOS1P29475 1434 aa33.52■■■□□ 2.96
HERC2P4-206ENST00000568097 SYNMO15061 1565 aa33.51■■■□□ 2.96
HERC2P4-206ENST00000568097 ARHGAP23Q9P227 1491 aa33.51■■■□□ 2.96
HERC2P4-206ENST00000568097 LTKP29376 864 aa33.5■■■□□ 2.95
HERC2P4-206ENST00000568097 ITGAEP38570 1179 aa33.49■■■□□ 2.95
HERC2P4-206ENST00000568097 IDI1Q13907 227 aa33.49■■■□□ 2.95
HERC2P4-206ENST00000568097 PIK3C2BO00750 1634 aa33.49■■■□□ 2.95
HERC2P4-206ENST00000568097 SLIT1O75093 1534 aa33.48■■■□□ 2.95
HERC2P4-206ENST00000568097 IQGAP1P46940 1657 aa33.45■■■□□ 2.95
HERC2P4-206ENST00000568097 UNC13BO14795 1591 aa33.45■■■□□ 2.95
HERC2P4-206ENST00000568097 SCAF11Q99590 1463 aaKnown RBP33.44■■■□□ 2.94
HERC2P4-206ENST00000568097 TXNDC2Q86VQ3 553 aa33.41■■■□□ 2.94
HERC2P4-206ENST00000568097 TMEM2Q9UHN6 1383 aa33.41■■■□□ 2.94
HERC2P4-206ENST00000568097 CPS1P31327 1500 aa33.4■■■□□ 2.94
HERC2P4-206ENST00000568097 RRBP1Q9P2E9 1410 aaKnown RBP33.4■■■□□ 2.94
HERC2P4-206ENST00000568097 RPRD2Q5VT52 1461 aaKnown RBP33.39■■■□□ 2.94
HERC2P4-206ENST00000568097 TET3O43151 1660 aa33.38■■■□□ 2.93
HERC2P4-206ENST00000568097 UBAP1LF5GYI3 381 aa33.37■■■□□ 2.93
HERC2P4-206ENST00000568097 SLC52A1Q9NWF4 448 aa33.33■■■□□ 2.93
HERC2P4-206ENST00000568097 STAG3Q9UJ98 1225 aa33.33■■■□□ 2.93
HERC2P4-206ENST00000568097 STRCP1A6NGW2 1772 aa33.33■■■□□ 2.93
HERC2P4-206ENST00000568097 ADGRB3O60242 1522 aa33.33■■■□□ 2.93
HERC2P4-206ENST00000568097 KDM5AP29375 1690 aaKnown RBP33.33■■■□□ 2.93
HERC2P4-206ENST00000568097 EID1Q9Y6B2 187 aa33.3■■■□□ 2.92
HERC2P4-206ENST00000568097 IQGAP3Q86VI3 1631 aa33.3■■■□□ 2.92
HERC2P4-206ENST00000568097 NUP155O75694 1391 aa33.29■■■□□ 2.92
HERC2P4-206ENST00000568097 GCC2Q8IWJ2 1684 aa33.28■■■□□ 2.92
HERC2P4-206ENST00000568097 LRRC7Q96NW7 1537 aa33.27■■■□□ 2.92
HERC2P4-206ENST00000568097 E9PCH4 1651 aa33.26■■■□□ 2.92
HERC2P4-206ENST00000568097 ALKQ9UM73 1620 aa33.24■■■□□ 2.91
HERC2P4-206ENST00000568097 ZFYVE9O95405 1425 aa33.21■■■□□ 2.91
HERC2P4-206ENST00000568097 NAIPQ13075 1403 aa33.19■■■□□ 2.9
HERC2P4-206ENST00000568097 TMEM131LA2VDJ0 1609 aa33.18■■■□□ 2.9
HERC2P4-206ENST00000568097 SLC26A8Q96RN1 970 aa33.16■■■□□ 2.9
HERC2P4-206ENST00000568097 PIP4K2BP78356 416 aa33.15■■■□□ 2.9
HERC2P4-206ENST00000568097 TOM1O60784 492 aa33.14■■■□□ 2.9
HERC2P4-206ENST00000568097 RIMS2Q9UQ26 1411 aa33.13■■■□□ 2.89
HERC2P4-206ENST00000568097 MYO5BQ9ULV0 1848 aa33.12■■■□□ 2.89
HERC2P4-206ENST00000568097 SENP3Q9H4L4 574 aaPredicted RBP33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms