RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
TCF4-236ENST00000567880 CLSPNQ9HAW4 1339 aa15.3■□□□□ 0.04
TCF4-236ENST00000567880 NUP155O75694 1391 aa15.29■□□□□ 0.04
TCF4-236ENST00000567880 UNC13BO14795 1591 aa15.29■□□□□ 0.04
TCF4-236ENST00000567880 ZMYM4Q5VZL5 1548 aa15.28■□□□□ 0.04
TCF4-236ENST00000567880 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
TCF4-236ENST00000567880 PZPP20742 1482 aa15.28■□□□□ 0.04
TCF4-236ENST00000567880 COL17A1Q9UMD9 1497 aaPredicted RBP15.28■□□□□ 0.04
TCF4-236ENST00000567880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.04
TCF4-236ENST00000567880 A2MP01023 1474 aa15.28■□□□□ 0.04
TCF4-236ENST00000567880 EIF2AK4Q9P2K8 1649 aaKnown RBP15.27■□□□□ 0.04
TCF4-236ENST00000567880 DHX29Q7Z478 1369 aaKnown RBP15.27■□□□□ 0.03
TCF4-236ENST00000567880 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.03
TCF4-236ENST00000567880 KDM5DQ9BY66 1539 aa15.26■□□□□ 0.03
TCF4-236ENST00000567880 FOXD1Q16676 465 aa15.25■□□□□ 0.03
TCF4-236ENST00000567880 KIF3BO15066 747 aa15.25■□□□□ 0.03
TCF4-236ENST00000567880 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
TCF4-236ENST00000567880 DEPDC5O75140 1603 aa15.24■□□□□ 0.03
TCF4-236ENST00000567880 IQGAP3Q86VI3 1631 aa15.24■□□□□ 0.03
TCF4-236ENST00000567880 MAGI2Q86UL8 1455 aa15.23■□□□□ 0.03
TCF4-236ENST00000567880 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
TCF4-236ENST00000567880 SIN3AQ96ST3 1273 aa15.23■□□□□ 0.03
TCF4-236ENST00000567880 PKD2Q13563 968 aa15.21■□□□□ 0.03
TCF4-236ENST00000567880 BCORL1Q5H9F3 1711 aa15.2■□□□□ 0.02
TCF4-236ENST00000567880 MROH1Q8NDA8 1641 aa15.2■□□□□ 0.02
TCF4-236ENST00000567880 RNF17Q9BXT8 1623 aaKnown RBP15.2■□□□□ 0.02
TCF4-236ENST00000567880 ZBTB22O15209 634 aa15.19■□□□□ 0.02
TCF4-236ENST00000567880 PRDM15P57071 1507 aaPredicted RBP15.19■□□□□ 0.02
TCF4-236ENST00000567880 ARHGEF40Q8TER5 1519 aa15.18■□□□□ 0.02
TCF4-236ENST00000567880 ATP10AO60312 1499 aa15.18■□□□□ 0.02
TCF4-236ENST00000567880 CEP152O94986 1710 aa15.18■□□□□ 0.02
TCF4-236ENST00000567880 KANK1Q14678 1352 aa15.18■□□□□ 0.02
TCF4-236ENST00000567880 GGT6Q6P531 493 aa15.17■□□□□ 0.02
TCF4-236ENST00000567880 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
TCF4-236ENST00000567880 SIGLEC1Q9BZZ2 1709 aa15.16■□□□□ 0.02
TCF4-236ENST00000567880 TET3O43151 1660 aa15.16■□□□□ 0.02
TCF4-236ENST00000567880 VWDEQ8N2E2 1590 aa15.15■□□□□ 0.02
TCF4-236ENST00000567880 E9PCH4 1651 aa15.15■□□□□ 0.02
TCF4-236ENST00000567880 CFAP65Q6ZU64 1925 aaKnown RBP15.15■□□□□ 0.02
TCF4-236ENST00000567880 REREQ9P2R6 1566 aa15.14■□□□□ 0.01
TCF4-236ENST00000567880 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
TCF4-236ENST00000567880 SPHKAPQ2M3C7 1700 aa15.1■□□□□ 0.01
TCF4-236ENST00000567880 AGLP35573 1532 aa15.1■□□□□ 0.01
TCF4-236ENST00000567880 WASHC2CQ9Y4E1 1318 aa15.09■□□□□ 0.01
TCF4-236ENST00000567880 EFCAB6Q5THR3 1501 aa15.09■□□□□ 0.01
TCF4-236ENST00000567880 TAOK2Q9UL54 1235 aa15.09■□□□□ 0.01
TCF4-236ENST00000567880 RPRD2Q5VT52 1461 aaKnown RBP15.09■□□□□ 0.01
TCF4-236ENST00000567880 ZC3H13Q5T200 1668 aaKnown RBP15.08■□□□□ 0.01
TCF4-236ENST00000567880 ABCC3O15438 1527 aa15.08■□□□□ 0.01
TCF4-236ENST00000567880 CAMSAP1Q5T5Y3 1602 aa15.08■□□□□ 0
TCF4-236ENST00000567880 LMTK2Q8IWU2 1503 aa15.07■□□□□ 0
TCF4-236ENST00000567880 MLECQ14165 292 aa15.07■□□□□ 0
TCF4-236ENST00000567880 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
TCF4-236ENST00000567880 TIMELESSQ9UNS1 1208 aa15.05■□□□□ 0
TCF4-236ENST00000567880 CCDC144AA2RUR9 1427 aa15.05■□□□□ 0
TCF4-236ENST00000567880 PLA2R1Q13018 1463 aa15.05■□□□□ 0
TCF4-236ENST00000567880 CLTCQ00610 1675 aaKnown RBP15.04■□□□□ -0
TCF4-236ENST00000567880 TRPM2O94759 1503 aa15.02■□□□□ -0
TCF4-236ENST00000567880 NPATQ14207 1427 aa15.02■□□□□ -0
TCF4-236ENST00000567880 L3MBTL2Q969R5 705 aa15.01□□□□□ -0.01
TCF4-236ENST00000567880 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
TCF4-236ENST00000567880 PTPRTO14522 1441 aa15□□□□□ -0.01
TCF4-236ENST00000567880 PPP1R15AO75807 674 aaPredicted RBP15□□□□□ -0.01
TCF4-236ENST00000567880 KIF1BO60333 1816 aa14.99□□□□□ -0.01
TCF4-236ENST00000567880 UGGT1Q9NYU2 1555 aa14.99□□□□□ -0.01
TCF4-236ENST00000567880 ESF1Q9H501 851 aaKnown RBP14.98□□□□□ -0.01
TCF4-236ENST00000567880 ARXQ96QS3 562 aa14.98□□□□□ -0.01
TCF4-236ENST00000567880 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
TCF4-236ENST00000567880 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
TCF4-236ENST00000567880 ARHGAP31Q2M1Z3 1444 aa14.96□□□□□ -0.01
TCF4-236ENST00000567880 RGL3Q3MIN7 710 aa14.96□□□□□ -0.01
TCF4-236ENST00000567880 FER1L4A9Z1Z3 1794 aa14.95□□□□□ -0.02
TCF4-236ENST00000567880 BCANQ96GW7 911 aa14.94□□□□□ -0.02
TCF4-236ENST00000567880 CNTLNQ9NXG0 1405 aa14.94□□□□□ -0.02
TCF4-236ENST00000567880 SYNMO15061 1565 aa14.94□□□□□ -0.02
TCF4-236ENST00000567880 MROH2AA6NES4 1674 aa14.93□□□□□ -0.02
TCF4-236ENST00000567880 ZNF326Q5BKZ1 582 aaKnown RBP14.92□□□□□ -0.02
TCF4-236ENST00000567880 DCAF11Q8TEB1 546 aa14.92□□□□□ -0.02
TCF4-236ENST00000567880 KDM2AQ9Y2K7 1162 aa14.92□□□□□ -0.02
TCF4-236ENST00000567880 NOS1P29475 1434 aa14.92□□□□□ -0.02
TCF4-236ENST00000567880 FBXO31Q5XUX0 539 aaPredicted RBP14.92□□□□□ -0.02
TCF4-236ENST00000567880 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
TCF4-236ENST00000567880 SPATA31E1Q6ZUB1 1445 aa14.9□□□□□ -0.02
TCF4-236ENST00000567880 ERVK-7P63135 1459 aa14.9□□□□□ -0.02
TCF4-236ENST00000567880 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
TCF4-236ENST00000567880 MYO5BQ9ULV0 1848 aa14.9□□□□□ -0.02
TCF4-236ENST00000567880 ZMYM3Q14202 1370 aa14.9□□□□□ -0.02
TCF4-236ENST00000567880 NBPF8Q3BBV2 869 aa14.89□□□□□ -0.03
TCF4-236ENST00000567880 PELP1Q8IZL8 1130 aaKnown RBP14.88□□□□□ -0.03
TCF4-236ENST00000567880 PLCB2Q00722 1185 aa14.88□□□□□ -0.03
TCF4-236ENST00000567880 C3P01024 1663 aa14.87□□□□□ -0.03
TCF4-236ENST00000567880 ADGRB3O60242 1522 aa14.87□□□□□ -0.03
TCF4-236ENST00000567880 SPATA31D1Q6ZQQ2 1576 aa14.87□□□□□ -0.03
TCF4-236ENST00000567880 MADDQ8WXG6 1647 aa14.86□□□□□ -0.03
TCF4-236ENST00000567880 RIMS1Q86UR5 1692 aaKnown RBP14.86□□□□□ -0.03
TCF4-236ENST00000567880 NEURL4Q96JN8 1562 aa14.86□□□□□ -0.03
TCF4-236ENST00000567880 SENP3Q9H4L4 574 aaPredicted RBP14.86□□□□□ -0.03
TCF4-236ENST00000567880 IFT172Q9UG01 1749 aa14.85□□□□□ -0.03
TCF4-236ENST00000567880 IDI1Q13907 227 aa14.85□□□□□ -0.03
TCF4-236ENST00000567880 SLC52A1Q9NWF4 448 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms