RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 VWDEQ8N2E2 1590 aa22.85■■□□□ 1.25
SMG1-213ENST00000567737 RGS17Q9UGC6 210 aaPredicted RBP22.84■■□□□ 1.25
SMG1-213ENST00000567737 TNRQ92752 1358 aa22.83■■□□□ 1.25
SMG1-213ENST00000567737 INO80Q9ULG1 1556 aaPredicted RBP22.83■■□□□ 1.25
SMG1-213ENST00000567737 KIAA1107Q9UPP5 1409 aa22.81■■□□□ 1.24
SMG1-213ENST00000567737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.8■■□□□ 1.24
SMG1-213ENST00000567737 NPHP4O75161 1426 aaPredicted RBP22.8■■□□□ 1.24
SMG1-213ENST00000567737 PLEKHH2Q8IVE3 1493 aa22.79■■□□□ 1.24
SMG1-213ENST00000567737 THEMISQ8N1K5 641 aaPredicted RBP22.78■■□□□ 1.24
SMG1-213ENST00000567737 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
SMG1-213ENST00000567737 FBXO31Q5XUX0 539 aaPredicted RBP22.77■■□□□ 1.24
SMG1-213ENST00000567737 CASKIN1Q8WXD9 1431 aa22.76■■□□□ 1.23
SMG1-213ENST00000567737 RNF17Q9BXT8 1623 aaKnown RBP22.76■■□□□ 1.23
SMG1-213ENST00000567737 MED14O60244 1454 aa22.76■■□□□ 1.23
SMG1-213ENST00000567737 ADGBQ8N7X0 1667 aa22.75■■□□□ 1.23
SMG1-213ENST00000567737 LRRC7Q96NW7 1537 aa22.74■■□□□ 1.23
SMG1-213ENST00000567737 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
SMG1-213ENST00000567737 DEPDC5O75140 1603 aa22.73■■□□□ 1.23
SMG1-213ENST00000567737 PZPP20742 1482 aa22.73■■□□□ 1.23
SMG1-213ENST00000567737 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
SMG1-213ENST00000567737 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
SMG1-213ENST00000567737 NLRP1Q9C000 1473 aa22.71■■□□□ 1.23
SMG1-213ENST00000567737 SYNMO15061 1565 aa22.71■■□□□ 1.23
SMG1-213ENST00000567737 IQGAP1P46940 1657 aa22.7■■□□□ 1.22
SMG1-213ENST00000567737 POTEAQ6S8J7 498 aa22.69■■□□□ 1.22
SMG1-213ENST00000567737 KDM5DQ9BY66 1539 aa22.67■■□□□ 1.22
SMG1-213ENST00000567737 MIA2Q96PC5 1412 aa22.67■■□□□ 1.22
SMG1-213ENST00000567737 CCNB3Q8WWL7 1395 aa22.67■■□□□ 1.22
SMG1-213ENST00000567737 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
SMG1-213ENST00000567737 KCNA4P22459 653 aa22.66■■□□□ 1.22
SMG1-213ENST00000567737 STRCP1A6NGW2 1772 aa22.66■■□□□ 1.22
SMG1-213ENST00000567737 WASHC2CQ9Y4E1 1318 aa22.65■■□□□ 1.22
SMG1-213ENST00000567737 KIF3BO15066 747 aa22.65■■□□□ 1.22
SMG1-213ENST00000567737 FYCO1Q9BQS8 1478 aa22.62■■□□□ 1.21
SMG1-213ENST00000567737 RTEL1-TNFRSF6BF6WH68 1400 aa22.62■■□□□ 1.21
SMG1-213ENST00000567737 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
SMG1-213ENST00000567737 MBD5Q9P267 1494 aa22.56■■□□□ 1.2
SMG1-213ENST00000567737 FAM135BQ49AJ0 1406 aa22.56■■□□□ 1.2
SMG1-213ENST00000567737 SETD1AO15047 1707 aaKnown RBP22.53■■□□□ 1.2
SMG1-213ENST00000567737 ZC3H13Q5T200 1668 aaKnown RBP22.52■■□□□ 1.2
SMG1-213ENST00000567737 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
SMG1-213ENST00000567737 NCBP3Q53F19 620 aaKnown RBP22.5■■□□□ 1.19
SMG1-213ENST00000567737 SCAF11Q99590 1463 aaKnown RBP22.49■■□□□ 1.19
SMG1-213ENST00000567737 CCDC141Q6ZP82 1450 aa22.46■■□□□ 1.19
SMG1-213ENST00000567737 TIAM1Q13009 1591 aa22.46■■□□□ 1.19
SMG1-213ENST00000567737 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.18
SMG1-213ENST00000567737 MAPK8IP2Q13387 824 aaPredicted RBP22.43■■□□□ 1.18
SMG1-213ENST00000567737 TXNDC2Q86VQ3 553 aa22.43■■□□□ 1.18
SMG1-213ENST00000567737 UPF1Q92900 1129 aaKnown RBP eCLIP22.43■■□□□ 1.18
SMG1-213ENST00000567737 ERVK-7P63135 1459 aa22.42■■□□□ 1.18
SMG1-213ENST00000567737 ROBO1Q9Y6N7 1651 aa22.42■■□□□ 1.18
SMG1-213ENST00000567737 LTKP29376 864 aa22.41■■□□□ 1.18
SMG1-213ENST00000567737 RSPH4AQ5TD94 716 aa22.41■■□□□ 1.18
SMG1-213ENST00000567737 TMEM94Q12767 1356 aa22.4■■□□□ 1.18
SMG1-213ENST00000567737 UBR1Q8IWV7 1749 aa22.4■■□□□ 1.18
SMG1-213ENST00000567737 EID1Q9Y6B2 187 aa22.39■■□□□ 1.17
SMG1-213ENST00000567737 ABCC3O15438 1527 aa22.39■■□□□ 1.17
SMG1-213ENST00000567737 LRRC9Q6ZRR7 1453 aa22.38■■□□□ 1.17
SMG1-213ENST00000567737 SLIT1O75093 1534 aa22.37■■□□□ 1.17
SMG1-213ENST00000567737 NCOA2Q15596 1464 aa22.37■■□□□ 1.17
SMG1-213ENST00000567737 ARHGAP23Q9P227 1491 aa22.37■■□□□ 1.17
SMG1-213ENST00000567737 CNKSR2Q8WXI2 1034 aa22.37■■□□□ 1.17
SMG1-213ENST00000567737 JCADQ9P266 1359 aa22.37■■□□□ 1.17
SMG1-213ENST00000567737 TSPY4P0CV99 314 aa22.35■■□□□ 1.17
SMG1-213ENST00000567737 TSPY10P0CW01 314 aa22.35■■□□□ 1.17
SMG1-213ENST00000567737 EHBP1L1Q8N3D4 1523 aa22.35■■□□□ 1.17
SMG1-213ENST00000567737 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
SMG1-213ENST00000567737 CAMSAP2Q08AD1 1489 aa22.34■■□□□ 1.17
SMG1-213ENST00000567737 CEP162Q5TB80 1403 aa22.33■■□□□ 1.17
SMG1-213ENST00000567737 ZNF772Q68DY9 489 aaPredicted RBP22.32■■□□□ 1.16
SMG1-213ENST00000567737 PROSER2Q86WR7 435 aaPredicted RBP22.32■■□□□ 1.16
SMG1-213ENST00000567737 KCNA6P17658 529 aa22.31■■□□□ 1.16
SMG1-213ENST00000567737 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
SMG1-213ENST00000567737 MEX3CQ5U5Q3 659 aaKnown RBP22.3■■□□□ 1.16
SMG1-213ENST00000567737 PHLPP1O60346 1717 aa22.3■■□□□ 1.16
SMG1-213ENST00000567737 RBM33Q96EV2 1170 aaKnown RBP22.29■■□□□ 1.16
SMG1-213ENST00000567737 MSH6P52701 1360 aa22.27■■□□□ 1.16
SMG1-213ENST00000567737 TMEM2Q9UHN6 1383 aa22.26■■□□□ 1.15
SMG1-213ENST00000567737 SLAIN2Q9P270 581 aa22.26■■□□□ 1.15
SMG1-213ENST00000567737 STAG3Q9UJ98 1225 aa22.26■■□□□ 1.15
SMG1-213ENST00000567737 SPATA31A6Q5VVP1 1343 aa22.26■■□□□ 1.15
SMG1-213ENST00000567737 ARHGEF5Q12774 1597 aa22.25■■□□□ 1.15
SMG1-213ENST00000567737 PRDM15P57071 1507 aaPredicted RBP22.25■■□□□ 1.15
SMG1-213ENST00000567737 EIF2AK4Q9P2K8 1649 aaKnown RBP22.24■■□□□ 1.15
SMG1-213ENST00000567737 CEP152O94986 1710 aa22.23■■□□□ 1.15
SMG1-213ENST00000567737 CFAP65Q6ZU64 1925 aaKnown RBP22.23■■□□□ 1.15
SMG1-213ENST00000567737 NKTRP30414 1462 aaKnown RBP22.22■■□□□ 1.15
SMG1-213ENST00000567737 LRP6O75581 1613 aa22.22■■□□□ 1.15
SMG1-213ENST00000567737 MROH1Q8NDA8 1641 aa22.22■■□□□ 1.15
SMG1-213ENST00000567737 RXRBP28702 533 aa22.22■■□□□ 1.15
SMG1-213ENST00000567737 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
SMG1-213ENST00000567737 FGD6Q6ZV73 1430 aa22.2■■□□□ 1.14
SMG1-213ENST00000567737 COL16A1Q07092 1604 aaPredicted RBP22.2■■□□□ 1.14
SMG1-213ENST00000567737 ARHGAP31Q2M1Z3 1444 aa22.19■■□□□ 1.14
SMG1-213ENST00000567737 PIK3C2BO00750 1634 aa22.19■■□□□ 1.14
SMG1-213ENST00000567737 NWD1Q149M9 1564 aa22.16■■□□□ 1.14
SMG1-213ENST00000567737 MAST1Q9Y2H9 1570 aa22.16■■□□□ 1.14
SMG1-213ENST00000567737 CDK12Q9NYV4 1490 aaPredicted RBP22.16■■□□□ 1.14
SMG1-213ENST00000567737 TET3O43151 1660 aa22.16■■□□□ 1.14
SMG1-213ENST00000567737 EFCAB6Q5THR3 1501 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms