RNA–Protein interactions for RNA: ENST00000567409.1

ITGAX-206, Transcript of integrin subunit alpha X, humanhuman

TSL 1 (best)

Gene ITGAX, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAX-206ENST00000567409 ROCK1Q13464 1354 aa18.68■□□□□ 0.58
ITGAX-206ENST00000567409 CNTLNQ9NXG0 1405 aa18.68■□□□□ 0.58
ITGAX-206ENST00000567409 EIF2AK4Q9P2K8 1649 aaKnown RBP18.67■□□□□ 0.58
ITGAX-206ENST00000567409 WASHC2CQ9Y4E1 1318 aa18.66■□□□□ 0.58
ITGAX-206ENST00000567409 ANKRD50Q9ULJ7 1429 aa18.64■□□□□ 0.57
ITGAX-206ENST00000567409 CEBPAP49715 358 aaPredicted RBP18.62■□□□□ 0.57
ITGAX-206ENST00000567409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.57
ITGAX-206ENST00000567409 ZMYM3Q14202 1370 aa18.61■□□□□ 0.57
ITGAX-206ENST00000567409 KANK1Q14678 1352 aa18.61■□□□□ 0.57
ITGAX-206ENST00000567409 RNF17Q9BXT8 1623 aaKnown RBP18.6■□□□□ 0.57
ITGAX-206ENST00000567409 FAM135AQ9P2D6 1515 aa18.6■□□□□ 0.57
ITGAX-206ENST00000567409 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
ITGAX-206ENST00000567409 KDM5DQ9BY66 1539 aa18.59■□□□□ 0.57
ITGAX-206ENST00000567409 LMTK3Q96Q04 1460 aa18.58■□□□□ 0.56
ITGAX-206ENST00000567409 MROH2AA6NES4 1674 aa18.57■□□□□ 0.56
ITGAX-206ENST00000567409 C3P01024 1663 aa18.55■□□□□ 0.56
ITGAX-206ENST00000567409 PRDM15P57071 1507 aaPredicted RBP18.54■□□□□ 0.56
ITGAX-206ENST00000567409 ZC3H13Q5T200 1668 aaKnown RBP18.54■□□□□ 0.56
ITGAX-206ENST00000567409 PREX1Q8TCU6 1659 aa18.54■□□□□ 0.56
ITGAX-206ENST00000567409 MROH1Q8NDA8 1641 aa18.53■□□□□ 0.56
ITGAX-206ENST00000567409 ABCC3O15438 1527 aa18.53■□□□□ 0.56
ITGAX-206ENST00000567409 DEPDC5O75140 1603 aa18.52■□□□□ 0.56
ITGAX-206ENST00000567409 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
ITGAX-206ENST00000567409 NAIPQ13075 1403 aa18.51■□□□□ 0.55
ITGAX-206ENST00000567409 NPATQ14207 1427 aa18.5■□□□□ 0.55
ITGAX-206ENST00000567409 ILDR1Q86SU0 546 aaPredicted RBP18.49■□□□□ 0.55
ITGAX-206ENST00000567409 PZPP20742 1482 aa18.49■□□□□ 0.55
ITGAX-206ENST00000567409 SETD1BQ9UPS6 1966 aaKnown RBP18.48■□□□□ 0.55
ITGAX-206ENST00000567409 UHRF1BP1Q6BDS2 1440 aa18.48■□□□□ 0.55
ITGAX-206ENST00000567409 GCC2Q8IWJ2 1684 aa18.47■□□□□ 0.55
ITGAX-206ENST00000567409 NUP155O75694 1391 aa18.47■□□□□ 0.55
ITGAX-206ENST00000567409 CEP152O94986 1710 aa18.47■□□□□ 0.55
ITGAX-206ENST00000567409 FBXO31Q5XUX0 539 aaPredicted RBP18.47■□□□□ 0.55
ITGAX-206ENST00000567409 UNC13BO14795 1591 aa18.47■□□□□ 0.55
ITGAX-206ENST00000567409 VWDEQ8N2E2 1590 aa18.46■□□□□ 0.55
ITGAX-206ENST00000567409 CAMSAP1Q5T5Y3 1602 aa18.45■□□□□ 0.54
ITGAX-206ENST00000567409 LMTK2Q8IWU2 1503 aa18.45■□□□□ 0.54
ITGAX-206ENST00000567409 TRIM52Q96A61 297 aa18.45■□□□□ 0.54
ITGAX-206ENST00000567409 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
ITGAX-206ENST00000567409 ARHGAP31Q2M1Z3 1444 aa18.44■□□□□ 0.54
ITGAX-206ENST00000567409 TNRQ92752 1358 aa18.43■□□□□ 0.54
ITGAX-206ENST00000567409 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
ITGAX-206ENST00000567409 FBXO41Q8TF61 875 aa18.41■□□□□ 0.54
ITGAX-206ENST00000567409 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
ITGAX-206ENST00000567409 HSPA2P54652 639 aa18.4■□□□□ 0.54
ITGAX-206ENST00000567409 ERVK-7P63135 1459 aa18.39■□□□□ 0.54
ITGAX-206ENST00000567409 EFCAB6Q5THR3 1501 aa18.39■□□□□ 0.54
ITGAX-206ENST00000567409 IQGAP3Q86VI3 1631 aa18.39■□□□□ 0.53
ITGAX-206ENST00000567409 TET3O43151 1660 aa18.38■□□□□ 0.53
ITGAX-206ENST00000567409 RPRD2Q5VT52 1461 aaKnown RBP18.38■□□□□ 0.53
ITGAX-206ENST00000567409 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
ITGAX-206ENST00000567409 MYO3AQ8NEV4 1616 aa18.36■□□□□ 0.53
ITGAX-206ENST00000567409 NLRP1Q9C000 1473 aa18.36■□□□□ 0.53
ITGAX-206ENST00000567409 SLC4A1APQ9BWU0 796 aaKnown RBP18.35■□□□□ 0.53
ITGAX-206ENST00000567409 CEP170BQ9Y4F5 1589 aaPredicted RBP18.34■□□□□ 0.53
ITGAX-206ENST00000567409 A2ML1A8K2U0 1454 aa18.33■□□□□ 0.53
ITGAX-206ENST00000567409 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.53
ITGAX-206ENST00000567409 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.52
ITGAX-206ENST00000567409 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
ITGAX-206ENST00000567409 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
ITGAX-206ENST00000567409 SLC52A1Q9NWF4 448 aa18.31■□□□□ 0.52
ITGAX-206ENST00000567409 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
ITGAX-206ENST00000567409 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
ITGAX-206ENST00000567409 NOS1P29475 1434 aa18.31■□□□□ 0.52
ITGAX-206ENST00000567409 PKD2Q13563 968 aa18.3■□□□□ 0.52
ITGAX-206ENST00000567409 E9PCH4 1651 aa18.3■□□□□ 0.52
ITGAX-206ENST00000567409 HRCP23327 699 aa18.29■□□□□ 0.52
ITGAX-206ENST00000567409 UGGT1Q9NYU2 1555 aa18.29■□□□□ 0.52
ITGAX-206ENST00000567409 IDI1Q13907 227 aa18.28■□□□□ 0.52
ITGAX-206ENST00000567409 MPHOSPH9Q99550 1183 aa18.28■□□□□ 0.52
ITGAX-206ENST00000567409 PTPRTO14522 1441 aa18.27■□□□□ 0.52
ITGAX-206ENST00000567409 SYNMO15061 1565 aa18.25■□□□□ 0.51
ITGAX-206ENST00000567409 STRCQ7RTU9 1775 aa18.25■□□□□ 0.51
ITGAX-206ENST00000567409 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
ITGAX-206ENST00000567409 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
ITGAX-206ENST00000567409 CHGAP10645 457 aaKnown RBP18.23■□□□□ 0.51
ITGAX-206ENST00000567409 ANKLE2Q86XL3 938 aa18.23■□□□□ 0.51
ITGAX-206ENST00000567409 PIK3C2BO00750 1634 aa18.22■□□□□ 0.51
ITGAX-206ENST00000567409 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
ITGAX-206ENST00000567409 FOXD1Q16676 465 aa18.2■□□□□ 0.5
ITGAX-206ENST00000567409 EID1Q9Y6B2 187 aa18.2■□□□□ 0.5
ITGAX-206ENST00000567409 SPHKAPQ2M3C7 1700 aa18.2■□□□□ 0.5
ITGAX-206ENST00000567409 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
ITGAX-206ENST00000567409 HDGFP51858 240 aaKnown RBP18.18■□□□□ 0.5
ITGAX-206ENST00000567409 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
ITGAX-206ENST00000567409 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
ITGAX-206ENST00000567409 KDM5AP29375 1690 aaKnown RBP18.17■□□□□ 0.5
ITGAX-206ENST00000567409 TRPM2O94759 1503 aa18.17■□□□□ 0.5
ITGAX-206ENST00000567409 TMEM2Q9UHN6 1383 aa18.16■□□□□ 0.5
ITGAX-206ENST00000567409 IQSEC2Q5JU85 1478 aa18.15■□□□□ 0.5
ITGAX-206ENST00000567409 ZNF326Q5BKZ1 582 aaKnown RBP18.14■□□□□ 0.49
ITGAX-206ENST00000567409 SLIT1O75093 1534 aa18.13■□□□□ 0.49
ITGAX-206ENST00000567409 CCDC144AA2RUR9 1427 aa18.13■□□□□ 0.49
ITGAX-206ENST00000567409 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
ITGAX-206ENST00000567409 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
ITGAX-206ENST00000567409 SCAF11Q99590 1463 aaKnown RBP18.12■□□□□ 0.49
ITGAX-206ENST00000567409 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
ITGAX-206ENST00000567409 TMEM131LA2VDJ0 1609 aa18.12■□□□□ 0.49
ITGAX-206ENST00000567409 LTKP29376 864 aa18.11■□□□□ 0.49
ITGAX-206ENST00000567409 CLTCL1P53675 1640 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms