RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 EIF2AK4Q9P2K8 1649 aaKnown RBP25.85■■□□□ 1.73
PKD1-233ENST00000567355 KDM5DQ9BY66 1539 aa25.85■■□□□ 1.73
PKD1-233ENST00000567355 STRCQ7RTU9 1775 aa25.84■■□□□ 1.73
PKD1-233ENST00000567355 DAPK1P53355 1430 aa25.84■■□□□ 1.73
PKD1-233ENST00000567355 DUOX2Q9NRD8 1548 aa25.82■■□□□ 1.72
PKD1-233ENST00000567355 MYO3AQ8NEV4 1616 aa25.8■■□□□ 1.72
PKD1-233ENST00000567355 MROH1Q8NDA8 1641 aa25.79■■□□□ 1.72
PKD1-233ENST00000567355 ZNF142P52746 1687 aaPredicted RBP25.79■■□□□ 1.72
PKD1-233ENST00000567355 PZPP20742 1482 aa25.77■■□□□ 1.72
PKD1-233ENST00000567355 WASHC2CQ9Y4E1 1318 aa25.76■■□□□ 1.71
PKD1-233ENST00000567355 KIF15Q9NS87 1388 aa25.76■■□□□ 1.71
PKD1-233ENST00000567355 ZC3H13Q5T200 1668 aaKnown RBP25.74■■□□□ 1.71
PKD1-233ENST00000567355 ERBINQ96RT1 1412 aa25.74■■□□□ 1.71
PKD1-233ENST00000567355 ABCC3O15438 1527 aa25.73■■□□□ 1.71
PKD1-233ENST00000567355 NCOA1Q15788 1441 aa25.73■■□□□ 1.71
PKD1-233ENST00000567355 ILDR1Q86SU0 546 aaPredicted RBP25.73■■□□□ 1.71
PKD1-233ENST00000567355 CEP170BQ9Y4F5 1589 aaPredicted RBP25.73■■□□□ 1.71
PKD1-233ENST00000567355 CAMSAP1Q5T5Y3 1602 aa25.7■■□□□ 1.71
PKD1-233ENST00000567355 RRP7BPQ9NSQ0 103 aa25.7■■□□□ 1.7
PKD1-233ENST00000567355 ADGRL2O95490 1459 aa25.7■■□□□ 1.7
PKD1-233ENST00000567355 PRDM15P57071 1507 aaPredicted RBP25.69■■□□□ 1.7
PKD1-233ENST00000567355 FBXO31Q5XUX0 539 aaPredicted RBP25.69■■□□□ 1.7
PKD1-233ENST00000567355 DMRT2Q9Y5R5 561 aa25.69■■□□□ 1.7
PKD1-233ENST00000567355 PTPRTO14522 1441 aa25.69■■□□□ 1.7
PKD1-233ENST00000567355 DEPDC5O75140 1603 aa25.68■■□□□ 1.7
PKD1-233ENST00000567355 ANKRD30AQ9BXX3 1397 aa25.68■■□□□ 1.7
PKD1-233ENST00000567355 TNRQ92752 1358 aa25.67■■□□□ 1.7
PKD1-233ENST00000567355 A2ML1A8K2U0 1454 aa25.66■■□□□ 1.7
PKD1-233ENST00000567355 PLA2R1Q13018 1463 aa25.66■■□□□ 1.7
PKD1-233ENST00000567355 CEP152O94986 1710 aa25.65■■□□□ 1.7
PKD1-233ENST00000567355 CHIC2Q9UKJ5 165 aa25.64■■□□□ 1.7
PKD1-233ENST00000567355 FAM50AQ14320 339 aaKnown RBP25.63■■□□□ 1.69
PKD1-233ENST00000567355 SPATA31D1Q6ZQQ2 1576 aa25.62■■□□□ 1.69
PKD1-233ENST00000567355 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
PKD1-233ENST00000567355 ARHGAP31Q2M1Z3 1444 aa25.59■■□□□ 1.69
PKD1-233ENST00000567355 VWDEQ8N2E2 1590 aa25.59■■□□□ 1.69
PKD1-233ENST00000567355 ERVK-7P63135 1459 aa25.59■■□□□ 1.69
PKD1-233ENST00000567355 FBXO41Q8TF61 875 aa25.57■■□□□ 1.68
PKD1-233ENST00000567355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.56■■□□□ 1.68
PKD1-233ENST00000567355 LMTK2Q8IWU2 1503 aa25.56■■□□□ 1.68
PKD1-233ENST00000567355 NCKAP5LQ9HCH0 1330 aa25.56■■□□□ 1.68
PKD1-233ENST00000567355 PKD2Q13563 968 aa25.55■■□□□ 1.68
PKD1-233ENST00000567355 CERKQ8TCT0 537 aa25.54■■□□□ 1.68
PKD1-233ENST00000567355 PPARGC1BQ86YN6 1023 aaKnown RBP25.52■■□□□ 1.68
PKD1-233ENST00000567355 ANKRD50Q9ULJ7 1429 aa25.52■■□□□ 1.68
PKD1-233ENST00000567355 ROCK1Q13464 1354 aa25.51■■□□□ 1.67
PKD1-233ENST00000567355 UGGT1Q9NYU2 1555 aa25.51■■□□□ 1.67
PKD1-233ENST00000567355 LTBP4Q8N2S1 1624 aa25.51■■□□□ 1.67
PKD1-233ENST00000567355 KANK1Q14678 1352 aa25.5■■□□□ 1.67
PKD1-233ENST00000567355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.49■■□□□ 1.67
PKD1-233ENST00000567355 POLR1AO95602 1720 aaPredicted RBP25.49■■□□□ 1.67
PKD1-233ENST00000567355 NEURL4Q96JN8 1562 aa25.48■■□□□ 1.67
PKD1-233ENST00000567355 CFAP65Q6ZU64 1925 aaKnown RBP25.47■■□□□ 1.67
PKD1-233ENST00000567355 THEMISQ8N1K5 641 aaPredicted RBP25.46■■□□□ 1.67
PKD1-233ENST00000567355 EFCAB6Q5THR3 1501 aa25.45■■□□□ 1.66
PKD1-233ENST00000567355 RRBP1Q9P2E9 1410 aaKnown RBP25.44■■□□□ 1.66
PKD1-233ENST00000567355 UBR1Q8IWV7 1749 aa25.43■■□□□ 1.66
PKD1-233ENST00000567355 UNC13BO14795 1591 aa25.43■■□□□ 1.66
PKD1-233ENST00000567355 MED14O60244 1454 aa25.41■■□□□ 1.66
PKD1-233ENST00000567355 NOS1P29475 1434 aa25.38■■□□□ 1.65
PKD1-233ENST00000567355 ANKLE2Q86XL3 938 aa25.38■■□□□ 1.65
PKD1-233ENST00000567355 SYNMO15061 1565 aa25.38■■□□□ 1.65
PKD1-233ENST00000567355 ZNF335Q9H4Z2 1342 aaPredicted RBP25.37■■□□□ 1.65
PKD1-233ENST00000567355 IQSEC2Q5JU85 1478 aa25.37■■□□□ 1.65
PKD1-233ENST00000567355 TET3O43151 1660 aa25.36■■□□□ 1.65
PKD1-233ENST00000567355 RPRD2Q5VT52 1461 aaKnown RBP25.36■■□□□ 1.65
PKD1-233ENST00000567355 PIK3C2BO00750 1634 aa25.36■■□□□ 1.65
PKD1-233ENST00000567355 KDM5AP29375 1690 aaKnown RBP25.36■■□□□ 1.65
PKD1-233ENST00000567355 ARHGAP23Q9P227 1491 aa25.35■■□□□ 1.65
PKD1-233ENST00000567355 SLIT1O75093 1534 aa25.34■■□□□ 1.65
PKD1-233ENST00000567355 NPHP4O75161 1426 aaPredicted RBP25.33■■□□□ 1.65
PKD1-233ENST00000567355 ITGAEP38570 1179 aa25.33■■□□□ 1.65
PKD1-233ENST00000567355 GCC2Q8IWJ2 1684 aa25.32■■□□□ 1.64
PKD1-233ENST00000567355 IQGAP3Q86VI3 1631 aa25.32■■□□□ 1.64
PKD1-233ENST00000567355 IQGAP1P46940 1657 aa25.31■■□□□ 1.64
PKD1-233ENST00000567355 IDI1Q13907 227 aa25.29■■□□□ 1.64
PKD1-233ENST00000567355 SCAF11Q99590 1463 aaKnown RBP25.27■■□□□ 1.64
PKD1-233ENST00000567355 E9PCH4 1651 aa25.26■■□□□ 1.63
PKD1-233ENST00000567355 LTKP29376 864 aa25.25■■□□□ 1.63
PKD1-233ENST00000567355 SLC52A1Q9NWF4 448 aa25.25■■□□□ 1.63
PKD1-233ENST00000567355 TMEM2Q9UHN6 1383 aa25.25■■□□□ 1.63
PKD1-233ENST00000567355 ADGRB3O60242 1522 aa25.24■■□□□ 1.63
PKD1-233ENST00000567355 CPS1P31327 1500 aa25.23■■□□□ 1.63
PKD1-233ENST00000567355 NUP155O75694 1391 aa25.22■■□□□ 1.63
PKD1-233ENST00000567355 NAIPQ13075 1403 aa25.21■■□□□ 1.63
PKD1-233ENST00000567355 TXNDC2Q86VQ3 553 aa25.2■■□□□ 1.62
PKD1-233ENST00000567355 STAG3Q9UJ98 1225 aa25.17■■□□□ 1.62
PKD1-233ENST00000567355 STRCP1A6NGW2 1772 aa25.17■■□□□ 1.62
PKD1-233ENST00000567355 TMEM131LA2VDJ0 1609 aa25.16■■□□□ 1.62
PKD1-233ENST00000567355 EID1Q9Y6B2 187 aa25.16■■□□□ 1.62
PKD1-233ENST00000567355 HFM1A2PYH4 1435 aa25.15■■□□□ 1.62
PKD1-233ENST00000567355 MYO5BQ9ULV0 1848 aa25.13■■□□□ 1.61
PKD1-233ENST00000567355 ZFYVE9O95405 1425 aa25.12■■□□□ 1.61
PKD1-233ENST00000567355 LRRC7Q96NW7 1537 aa25.07■■□□□ 1.6
PKD1-233ENST00000567355 SPHKAPQ2M3C7 1700 aa25.07■■□□□ 1.6
PKD1-233ENST00000567355 UBAP1LF5GYI3 381 aa25.05■■□□□ 1.6
PKD1-233ENST00000567355 RIMS2Q9UQ26 1411 aa25.04■■□□□ 1.6
PKD1-233ENST00000567355 ALKQ9UM73 1620 aa25.03■■□□□ 1.6
PKD1-233ENST00000567355 PLEKHG1Q9ULL1 1385 aa25.02■■□□□ 1.6
PKD1-233ENST00000567355 TRPM2O94759 1503 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms