RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 UHRF1BP1Q6BDS2 1440 aa15.8■□□□□ 0.12
GTF3C1-206ENST00000566779 CNTLNQ9NXG0 1405 aa15.8■□□□□ 0.12
GTF3C1-206ENST00000566779 RTEL1-TNFRSF6BF6WH68 1400 aa15.79■□□□□ 0.12
GTF3C1-206ENST00000566779 MYO3AQ8NEV4 1616 aa15.77■□□□□ 0.12
GTF3C1-206ENST00000566779 TSPY4P0CV99 314 aa15.77■□□□□ 0.12
GTF3C1-206ENST00000566779 TSPY10P0CW01 314 aa15.77■□□□□ 0.12
GTF3C1-206ENST00000566779 MAST1Q9Y2H9 1570 aa15.77■□□□□ 0.11
GTF3C1-206ENST00000566779 MIA2Q96PC5 1412 aa15.77■□□□□ 0.11
GTF3C1-206ENST00000566779 KIF3BO15066 747 aa15.76■□□□□ 0.11
GTF3C1-206ENST00000566779 CFAP65Q6ZU64 1925 aaKnown RBP15.75■□□□□ 0.11
GTF3C1-206ENST00000566779 DHX29Q7Z478 1369 aaKnown RBP15.75■□□□□ 0.11
GTF3C1-206ENST00000566779 CEP152O94986 1710 aa15.74■□□□□ 0.11
GTF3C1-206ENST00000566779 RSPH4AQ5TD94 716 aa15.74■□□□□ 0.11
GTF3C1-206ENST00000566779 DNMT1P26358 1616 aaKnown RBP15.74■□□□□ 0.11
GTF3C1-206ENST00000566779 STRCQ7RTU9 1775 aa15.74■□□□□ 0.11
GTF3C1-206ENST00000566779 FGD6Q6ZV73 1430 aa15.73■□□□□ 0.11
GTF3C1-206ENST00000566779 ZMYM3Q14202 1370 aa15.73■□□□□ 0.11
GTF3C1-206ENST00000566779 KDM5DQ9BY66 1539 aa15.73■□□□□ 0.11
GTF3C1-206ENST00000566779 EIF2AK4Q9P2K8 1649 aaKnown RBP15.72■□□□□ 0.11
GTF3C1-206ENST00000566779 ZNF142P52746 1687 aaPredicted RBP15.71■□□□□ 0.11
GTF3C1-206ENST00000566779 RNF17Q9BXT8 1623 aaKnown RBP15.71■□□□□ 0.11
GTF3C1-206ENST00000566779 ZC3H13Q5T200 1668 aaKnown RBP15.69■□□□□ 0.1
GTF3C1-206ENST00000566779 DAPK1P53355 1430 aa15.68■□□□□ 0.1
GTF3C1-206ENST00000566779 NPATQ14207 1427 aa15.68■□□□□ 0.1
GTF3C1-206ENST00000566779 CEP170BQ9Y4F5 1589 aaPredicted RBP15.68■□□□□ 0.1
GTF3C1-206ENST00000566779 SHANK2Q9UPX8 1470 aa15.68■□□□□ 0.1
GTF3C1-206ENST00000566779 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
GTF3C1-206ENST00000566779 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
GTF3C1-206ENST00000566779 CAMSAP1Q5T5Y3 1602 aa15.68■□□□□ 0.1
GTF3C1-206ENST00000566779 DUOX2Q9NRD8 1548 aa15.68■□□□□ 0.1
GTF3C1-206ENST00000566779 TCOF1Q13428 1488 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-206ENST00000566779 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
GTF3C1-206ENST00000566779 ABCC5O15440 1437 aa15.67■□□□□ 0.1
GTF3C1-206ENST00000566779 PTPRKQ15262 1439 aa15.67■□□□□ 0.1
GTF3C1-206ENST00000566779 WASHC2CQ9Y4E1 1318 aa15.67■□□□□ 0.1
GTF3C1-206ENST00000566779 KIF15Q9NS87 1388 aa15.66■□□□□ 0.1
GTF3C1-206ENST00000566779 CHIC2Q9UKJ5 165 aa15.66■□□□□ 0.1
GTF3C1-206ENST00000566779 MROH1Q8NDA8 1641 aa15.65■□□□□ 0.1
GTF3C1-206ENST00000566779 FAM135AQ9P2D6 1515 aa15.64■□□□□ 0.09
GTF3C1-206ENST00000566779 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
GTF3C1-206ENST00000566779 RRP7BPQ9NSQ0 103 aa15.64■□□□□ 0.09
GTF3C1-206ENST00000566779 ABCC3O15438 1527 aa15.63■□□□□ 0.09
GTF3C1-206ENST00000566779 POLR1AO95602 1720 aaPredicted RBP15.63■□□□□ 0.09
GTF3C1-206ENST00000566779 PZPP20742 1482 aa15.62■□□□□ 0.09
GTF3C1-206ENST00000566779 TNRQ92752 1358 aa15.62■□□□□ 0.09
GTF3C1-206ENST00000566779 FBXO31Q5XUX0 539 aaPredicted RBP15.61■□□□□ 0.09
GTF3C1-206ENST00000566779 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
GTF3C1-206ENST00000566779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.6■□□□□ 0.092e-11■■□□□ 12.3
GTF3C1-206ENST00000566779 ANKRD30AQ9BXX3 1397 aa15.6■□□□□ 0.09
GTF3C1-206ENST00000566779 ERBINQ96RT1 1412 aa15.6■□□□□ 0.09
GTF3C1-206ENST00000566779 PRDM15P57071 1507 aaPredicted RBP15.59■□□□□ 0.09
GTF3C1-206ENST00000566779 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
GTF3C1-206ENST00000566779 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
GTF3C1-206ENST00000566779 A2ML1A8K2U0 1454 aa15.59■□□□□ 0.09
GTF3C1-206ENST00000566779 NCKAP5LQ9HCH0 1330 aa15.57■□□□□ 0.08
GTF3C1-206ENST00000566779 ITGAEP38570 1179 aa15.56■□□□□ 0.08
GTF3C1-206ENST00000566779 ERVK-7P63135 1459 aa15.54■□□□□ 0.08
GTF3C1-206ENST00000566779 KANK1Q14678 1352 aa15.54■□□□□ 0.08
GTF3C1-206ENST00000566779 SPATA31D1Q6ZQQ2 1576 aa15.53■□□□□ 0.08
GTF3C1-206ENST00000566779 PTPRTO14522 1441 aa15.53■□□□□ 0.08
GTF3C1-206ENST00000566779 UGGT1Q9NYU2 1555 aa15.53■□□□□ 0.08
GTF3C1-206ENST00000566779 ADGRL2O95490 1459 aa15.52■□□□□ 0.08
GTF3C1-206ENST00000566779 PLA2R1Q13018 1463 aa15.52■□□□□ 0.08
GTF3C1-206ENST00000566779 FBXO41Q8TF61 875 aa15.52■□□□□ 0.08
GTF3C1-206ENST00000566779 CERKQ8TCT0 537 aa15.51■□□□□ 0.07
GTF3C1-206ENST00000566779 NLRP1Q9C000 1473 aa15.51■□□□□ 0.07
GTF3C1-206ENST00000566779 UBR1Q8IWV7 1749 aa15.51■□□□□ 0.07
GTF3C1-206ENST00000566779 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
GTF3C1-206ENST00000566779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.49■□□□□ 0.07
GTF3C1-206ENST00000566779 PIK3C2BO00750 1634 aa15.48■□□□□ 0.07
GTF3C1-206ENST00000566779 ANKRD50Q9ULJ7 1429 aa15.48■□□□□ 0.07
GTF3C1-206ENST00000566779 GCC2Q8IWJ2 1684 aa15.48■□□□□ 0.07
GTF3C1-206ENST00000566779 IQGAP1P46940 1657 aa15.47■□□□□ 0.07
GTF3C1-206ENST00000566779 EFCAB6Q5THR3 1501 aa15.47■□□□□ 0.07
GTF3C1-206ENST00000566779 MYO5BQ9ULV0 1848 aa15.46■□□□□ 0.07
GTF3C1-206ENST00000566779 PKD2Q13563 968 aa15.46■□□□□ 0.07
GTF3C1-206ENST00000566779 TET3O43151 1660 aa15.46■□□□□ 0.07
GTF3C1-206ENST00000566779 ZNF335Q9H4Z2 1342 aaPredicted RBP15.45■□□□□ 0.06
GTF3C1-206ENST00000566779 UNC13BO14795 1591 aa15.45■□□□□ 0.06
GTF3C1-206ENST00000566779 VWDEQ8N2E2 1590 aa15.45■□□□□ 0.06
GTF3C1-206ENST00000566779 LTBP4Q8N2S1 1624 aa15.45■□□□□ 0.06
GTF3C1-206ENST00000566779 THEMISQ8N1K5 641 aaPredicted RBP15.43■□□□□ 0.06
GTF3C1-206ENST00000566779 SYNMO15061 1565 aa15.43■□□□□ 0.06
GTF3C1-206ENST00000566779 LMTK2Q8IWU2 1503 aa15.43■□□□□ 0.06
GTF3C1-206ENST00000566779 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
GTF3C1-206ENST00000566779 ARHGAP31Q2M1Z3 1444 aa15.42■□□□□ 0.06
GTF3C1-206ENST00000566779 ANKLE2Q86XL3 938 aa15.41■□□□□ 0.06
GTF3C1-206ENST00000566779 NPHP4O75161 1426 aaPredicted RBP15.41■□□□□ 0.06
GTF3C1-206ENST00000566779 E9PCH4 1651 aa15.41■□□□□ 0.06
GTF3C1-206ENST00000566779 IQGAP3Q86VI3 1631 aa15.39■□□□□ 0.05
GTF3C1-206ENST00000566779 DCAF8L1A6NGE4 600 aa15.39■□□□□ 0.05
GTF3C1-206ENST00000566779 ROCK1Q13464 1354 aa15.38■□□□□ 0.05
GTF3C1-206ENST00000566779 ADGRB3O60242 1522 aa15.38■□□□□ 0.05
GTF3C1-206ENST00000566779 STRCP1A6NGW2 1772 aa15.36■□□□□ 0.05
GTF3C1-206ENST00000566779 KDM5AP29375 1690 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-206ENST00000566779 SCAF11Q99590 1463 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-206ENST00000566779 RRBP1Q9P2E9 1410 aaKnown RBP15.35■□□□□ 0.05
GTF3C1-206ENST00000566779 SPHKAPQ2M3C7 1700 aa15.34■□□□□ 0.05
GTF3C1-206ENST00000566779 SLIT1O75093 1534 aa15.33■□□□□ 0.05
GTF3C1-206ENST00000566779 NUP155O75694 1391 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms