RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 ABCA6Q8N139 1617 aa11.33□□□□□ -0.6
SIN3A-207ENST00000566640 GPATCH8Q9UKJ3 1502 aaKnown RBP11.31□□□□□ -0.6
SIN3A-207ENST00000566640 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
SIN3A-207ENST00000566640 UHRF1BP1Q6BDS2 1440 aa11.29□□□□□ -0.6
SIN3A-207ENST00000566640 KIAA1107Q9UPP5 1409 aa11.29□□□□□ -0.6
SIN3A-207ENST00000566640 CERKQ8TCT0 537 aa11.29□□□□□ -0.6
SIN3A-207ENST00000566640 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
SIN3A-207ENST00000566640 ITSN2Q9NZM3 1697 aa11.29□□□□□ -0.6
SIN3A-207ENST00000566640 SAMD9LQ8IVG5 1584 aa11.28□□□□□ -0.6
SIN3A-207ENST00000566640 CEP162Q5TB80 1403 aa11.28□□□□□ -0.6
SIN3A-207ENST00000566640 KIDINS220Q9ULH0 1771 aa11.28□□□□□ -0.6
SIN3A-207ENST00000566640 PREX1Q8TCU6 1659 aa11.27□□□□□ -0.6
SIN3A-207ENST00000566640 SYCP2Q9BX26 1530 aa11.27□□□□□ -0.61
SIN3A-207ENST00000566640 CNTLNQ9NXG0 1405 aa11.26□□□□□ -0.61
SIN3A-207ENST00000566640 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
SIN3A-207ENST00000566640 ZNF777Q9ULD5 760 aaPredicted RBP11.26□□□□□ -0.61
SIN3A-207ENST00000566640 PLEKHH2Q8IVE3 1493 aa11.25□□□□□ -0.61
SIN3A-207ENST00000566640 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
SIN3A-207ENST00000566640 HNRNPMP52272 730 aaKnown RBP eCLIP11.25□□□□□ -0.61
SIN3A-207ENST00000566640 SPAG9O60271 1321 aaKnown RBP11.25□□□□□ -0.61
SIN3A-207ENST00000566640 CFDP1Q9UEE9 299 aaPredicted RBP11.24□□□□□ -0.61
SIN3A-207ENST00000566640 MTUS2Q5JR59 1369 aa11.24□□□□□ -0.61
SIN3A-207ENST00000566640 CCNB3Q8WWL7 1395 aa11.24□□□□□ -0.61
SIN3A-207ENST00000566640 NPATQ14207 1427 aa11.24□□□□□ -0.61
SIN3A-207ENST00000566640 PLXNC1O60486 1568 aa11.24□□□□□ -0.61
SIN3A-207ENST00000566640 PTPRTO14522 1441 aa11.23□□□□□ -0.61
SIN3A-207ENST00000566640 ATP7AQ04656 1500 aa11.23□□□□□ -0.61
SIN3A-207ENST00000566640 C3P01024 1663 aa11.23□□□□□ -0.61
SIN3A-207ENST00000566640 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
SIN3A-207ENST00000566640 A2MP01023 1474 aa11.22□□□□□ -0.61
SIN3A-207ENST00000566640 ZMYM3Q14202 1370 aa11.22□□□□□ -0.61
SIN3A-207ENST00000566640 STRCQ7RTU9 1775 aa11.22□□□□□ -0.61
SIN3A-207ENST00000566640 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
SIN3A-207ENST00000566640 MBD5Q9P267 1494 aa11.22□□□□□ -0.61
SIN3A-207ENST00000566640 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
SIN3A-207ENST00000566640 INO80Q9ULG1 1556 aaPredicted RBP11.22□□□□□ -0.61
SIN3A-207ENST00000566640 NCOA1Q15788 1441 aa11.21□□□□□ -0.61
SIN3A-207ENST00000566640 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
SIN3A-207ENST00000566640 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
SIN3A-207ENST00000566640 EHBP1L1Q8N3D4 1523 aa11.2□□□□□ -0.62
SIN3A-207ENST00000566640 ZNF644Q9H582 1327 aaPredicted RBP11.2□□□□□ -0.62
SIN3A-207ENST00000566640 VASPP50552 380 aaPredicted RBP11.19□□□□□ -0.62
SIN3A-207ENST00000566640 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
SIN3A-207ENST00000566640 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
SIN3A-207ENST00000566640 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
SIN3A-207ENST00000566640 MROH2AA6NES4 1674 aa11.18□□□□□ -0.62
SIN3A-207ENST00000566640 LTBP4Q8N2S1 1624 aa11.17□□□□□ -0.62
SIN3A-207ENST00000566640 SETD1BQ9UPS6 1966 aaKnown RBP11.16□□□□□ -0.62
SIN3A-207ENST00000566640 PLA2R1Q13018 1463 aa11.15□□□□□ -0.62
SIN3A-207ENST00000566640 GGT6Q6P531 493 aa11.15□□□□□ -0.62
SIN3A-207ENST00000566640 DHX29Q7Z478 1369 aaKnown RBP11.15□□□□□ -0.63
SIN3A-207ENST00000566640 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
SIN3A-207ENST00000566640 CAMSAP1Q5T5Y3 1602 aa11.14□□□□□ -0.63
SIN3A-207ENST00000566640 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
SIN3A-207ENST00000566640 IQSEC2Q5JU85 1478 aa11.13□□□□□ -0.63
SIN3A-207ENST00000566640 CCDC141Q6ZP82 1450 aa11.13□□□□□ -0.63
SIN3A-207ENST00000566640 SUPT6HQ7KZ85 1726 aaKnown RBP11.13□□□□□ -0.63
SIN3A-207ENST00000566640 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
SIN3A-207ENST00000566640 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
SIN3A-207ENST00000566640 CAMSAP2Q08AD1 1489 aa11.12□□□□□ -0.63
SIN3A-207ENST00000566640 CEP170BQ9Y4F5 1589 aaPredicted RBP11.11□□□□□ -0.63
SIN3A-207ENST00000566640 NCKAP5LQ9HCH0 1330 aa11.11□□□□□ -0.63
SIN3A-207ENST00000566640 ZNF142P52746 1687 aaPredicted RBP11.11□□□□□ -0.63
SIN3A-207ENST00000566640 CLTCQ00610 1675 aaKnown RBP11.11□□□□□ -0.63
SIN3A-207ENST00000566640 VPS8Q8N3P4 1428 aa11.11□□□□□ -0.63
SIN3A-207ENST00000566640 PKD2Q13563 968 aa11.11□□□□□ -0.63
SIN3A-207ENST00000566640 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
SIN3A-207ENST00000566640 CHADLQ6NUI6 762 aa11.11□□□□□ -0.63
SIN3A-207ENST00000566640 IFNLR1Q8IU57 520 aaPredicted RBP11.11□□□□□ -0.63
SIN3A-207ENST00000566640 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
SIN3A-207ENST00000566640 FAM135AQ9P2D6 1515 aa11.1□□□□□ -0.63
SIN3A-207ENST00000566640 POTEMA6NI47 508 aa11.1□□□□□ -0.63
SIN3A-207ENST00000566640 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
SIN3A-207ENST00000566640 A2ML1A8K2U0 1454 aa11.09□□□□□ -0.63
SIN3A-207ENST00000566640 PZPP20742 1482 aa11.08□□□□□ -0.64
SIN3A-207ENST00000566640 LRRC9Q6ZRR7 1453 aa11.08□□□□□ -0.64
SIN3A-207ENST00000566640 KIF3BO15066 747 aa11.08□□□□□ -0.64
SIN3A-207ENST00000566640 KDM5DQ9BY66 1539 aa11.08□□□□□ -0.64
SIN3A-207ENST00000566640 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
SIN3A-207ENST00000566640 TNRQ92752 1358 aa11.07□□□□□ -0.64
SIN3A-207ENST00000566640 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
SIN3A-207ENST00000566640 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
SIN3A-207ENST00000566640 FBXO31Q5XUX0 539 aaPredicted RBP11.07□□□□□ -0.64
SIN3A-207ENST00000566640 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
SIN3A-207ENST00000566640 DNMT1P26358 1616 aaKnown RBP11.06□□□□□ -0.64
SIN3A-207ENST00000566640 MAP3K1Q13233 1512 aa11.05□□□□□ -0.64
SIN3A-207ENST00000566640 WASHC2CQ9Y4E1 1318 aa11.05□□□□□ -0.64
SIN3A-207ENST00000566640 MIA2Q96PC5 1412 aa11.04□□□□□ -0.64
SIN3A-207ENST00000566640 TSPY4P0CV99 314 aa11.04□□□□□ -0.64
SIN3A-207ENST00000566640 TSPY10P0CW01 314 aa11.04□□□□□ -0.64
SIN3A-207ENST00000566640 KANK4Q5T7N3 995 aaPredicted RBP11.04□□□□□ -0.64
SIN3A-207ENST00000566640 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
SIN3A-207ENST00000566640 MIER1Q8N108 512 aa11.04□□□□□ -0.64
SIN3A-207ENST00000566640 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
SIN3A-207ENST00000566640 MAST1Q9Y2H9 1570 aa11.03□□□□□ -0.64
SIN3A-207ENST00000566640 ILDR2Q71H61 639 aa11.03□□□□□ -0.64
SIN3A-207ENST00000566640 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
SIN3A-207ENST00000566640 NEURL4Q96JN8 1562 aa11.03□□□□□ -0.64
SIN3A-207ENST00000566640 DISP3Q9P2K9 1392 aa11.03□□□□□ -0.64
SIN3A-207ENST00000566640 MYOM3Q5VTT5 1437 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms