RNA–Protein interactions for RNA: ENST00000566540.5

PMM2-211, Transcript of phosphomannomutase 2, humanhuman

TSL 1 (best)

Gene PMM2, Length 1,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-211ENST00000566540 DEPDC5O75140 1603 aa22.46■■□□□ 1.19
PMM2-211ENST00000566540 PZPP20742 1482 aa22.46■■□□□ 1.19
PMM2-211ENST00000566540 MROH1Q8NDA8 1641 aa22.43■■□□□ 1.18
PMM2-211ENST00000566540 CCER1Q8TC90 406 aaPredicted RBP22.43■■□□□ 1.18
PMM2-211ENST00000566540 SIGLEC1Q9BZZ2 1709 aa22.43■■□□□ 1.18
PMM2-211ENST00000566540 KIF3BO15066 747 aa22.42■■□□□ 1.18
PMM2-211ENST00000566540 RNF17Q9BXT8 1623 aaKnown RBP22.42■■□□□ 1.18
PMM2-211ENST00000566540 NUP155O75694 1391 aa22.41■■□□□ 1.18
PMM2-211ENST00000566540 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
PMM2-211ENST00000566540 IQGAP3Q86VI3 1631 aa22.4■■□□□ 1.18
PMM2-211ENST00000566540 AGLP35573 1532 aa22.39■■□□□ 1.17
PMM2-211ENST00000566540 PRDM15P57071 1507 aaPredicted RBP22.39■■□□□ 1.17
PMM2-211ENST00000566540 VWDEQ8N2E2 1590 aa22.39■■□□□ 1.17
PMM2-211ENST00000566540 FAM135AQ9P2D6 1515 aa22.38■■□□□ 1.17
PMM2-211ENST00000566540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.38■■□□□ 1.178e-8■■□□□ 13.8
PMM2-211ENST00000566540 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
PMM2-211ENST00000566540 GGT6Q6P531 493 aa22.3■■□□□ 1.16
PMM2-211ENST00000566540 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
PMM2-211ENST00000566540 KANK1Q14678 1352 aa22.29■■□□□ 1.16
PMM2-211ENST00000566540 LMTK2Q8IWU2 1503 aa22.29■■□□□ 1.16
PMM2-211ENST00000566540 PKD2Q13563 968 aa22.29■■□□□ 1.16
PMM2-211ENST00000566540 FOXD1Q16676 465 aa22.29■■□□□ 1.16
PMM2-211ENST00000566540 CEP152O94986 1710 aa22.27■■□□□ 1.16
PMM2-211ENST00000566540 TET3O43151 1660 aa22.27■■□□□ 1.16
PMM2-211ENST00000566540 ABCC3O15438 1527 aa22.26■■□□□ 1.15
PMM2-211ENST00000566540 E9PCH4 1651 aa22.24■■□□□ 1.15
PMM2-211ENST00000566540 ANKRD30BQ9BXX2 1392 aa22.23■■□□□ 1.15
PMM2-211ENST00000566540 ZC3H13Q5T200 1668 aaKnown RBP22.22■■□□□ 1.15
PMM2-211ENST00000566540 EFCAB6Q5THR3 1501 aa22.22■■□□□ 1.15
PMM2-211ENST00000566540 WASHC2CQ9Y4E1 1318 aa22.2■■□□□ 1.14
PMM2-211ENST00000566540 SIN3AQ96ST3 1273 aa22.2■■□□□ 1.14
PMM2-211ENST00000566540 ARID4BQ4LE39 1312 aaPredicted RBP22.19■■□□□ 1.14
PMM2-211ENST00000566540 CAMSAP1Q5T5Y3 1602 aa22.19■■□□□ 1.14
PMM2-211ENST00000566540 MLECQ14165 292 aa22.19■■□□□ 1.14
PMM2-211ENST00000566540 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
PMM2-211ENST00000566540 PLA2R1Q13018 1463 aa22.18■■□□□ 1.14
PMM2-211ENST00000566540 NPATQ14207 1427 aa22.15■■□□□ 1.14
PMM2-211ENST00000566540 CLTCQ00610 1675 aaKnown RBP22.15■■□□□ 1.14
PMM2-211ENST00000566540 PTPRTO14522 1441 aa22.13■■□□□ 1.13
PMM2-211ENST00000566540 ARHGAP31Q2M1Z3 1444 aa22.13■■□□□ 1.13
PMM2-211ENST00000566540 RPRD2Q5VT52 1461 aaKnown RBP22.13■■□□□ 1.13
PMM2-211ENST00000566540 SPHKAPQ2M3C7 1700 aa22.11■■□□□ 1.13
PMM2-211ENST00000566540 ZEB1P37275 1124 aaPredicted RBP22.11■■□□□ 1.13
PMM2-211ENST00000566540 NEUROD1Q13562 356 aa22.11■■□□□ 1.13
PMM2-211ENST00000566540 TRPM2O94759 1503 aa22.09■■□□□ 1.13
PMM2-211ENST00000566540 NOS1P29475 1434 aa22.06■■□□□ 1.12
PMM2-211ENST00000566540 CNTLNQ9NXG0 1405 aa22.05■■□□□ 1.12
PMM2-211ENST00000566540 MROH2AA6NES4 1674 aa22.05■■□□□ 1.12
PMM2-211ENST00000566540 FER1L4A9Z1Z3 1794 aa22.04■■□□□ 1.12
PMM2-211ENST00000566540 CCDC144AA2RUR9 1427 aa22.04■■□□□ 1.12
PMM2-211ENST00000566540 PREX1Q8TCU6 1659 aa22.04■■□□□ 1.12
PMM2-211ENST00000566540 CLTCL1P53675 1640 aa22.03■■□□□ 1.12
PMM2-211ENST00000566540 ZMYM3Q14202 1370 aa22.03■■□□□ 1.12
PMM2-211ENST00000566540 ADAMTSL3P82987 1691 aa22.03■■□□□ 1.12
PMM2-211ENST00000566540 SYNMO15061 1565 aa22.03■■□□□ 1.12
PMM2-211ENST00000566540 CFAP65Q6ZU64 1925 aaKnown RBP22.02■■□□□ 1.12
PMM2-211ENST00000566540 ESF1Q9H501 851 aaKnown RBP22.02■■□□□ 1.12
PMM2-211ENST00000566540 UGGT1Q9NYU2 1555 aa22.02■■□□□ 1.12
PMM2-211ENST00000566540 MADDQ8WXG6 1647 aa22.01■■□□□ 1.11
PMM2-211ENST00000566540 ERVK-7P63135 1459 aa22.01■■□□□ 1.11
PMM2-211ENST00000566540 FBXO31Q5XUX0 539 aaPredicted RBP22■■□□□ 1.11
PMM2-211ENST00000566540 TIMELESSQ9UNS1 1208 aa21.99■■□□□ 1.11
PMM2-211ENST00000566540 SPATA31D1Q6ZQQ2 1576 aa21.99■■□□□ 1.11
PMM2-211ENST00000566540 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
PMM2-211ENST00000566540 TONSLQ96HA7 1378 aa21.97■■□□□ 1.11
PMM2-211ENST00000566540 C3P01024 1663 aa21.96■■□□□ 1.11
PMM2-211ENST00000566540 SPATA31E1Q6ZUB1 1445 aa21.95■■□□□ 1.11
PMM2-211ENST00000566540 RIMS1Q86UR5 1692 aaKnown RBP21.95■■□□□ 1.1
PMM2-211ENST00000566540 L3MBTL2Q969R5 705 aa21.94■■□□□ 1.1
PMM2-211ENST00000566540 NEURL4Q96JN8 1562 aa21.91■■□□□ 1.1
PMM2-211ENST00000566540 CEBPAP49715 358 aaPredicted RBP21.91■■□□□ 1.1
PMM2-211ENST00000566540 ADGRB3O60242 1522 aa21.9■■□□□ 1.1
PMM2-211ENST00000566540 KIF1BO60333 1816 aa21.89■■□□□ 1.1
PMM2-211ENST00000566540 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.09
PMM2-211ENST00000566540 IDI1Q13907 227 aa21.89■■□□□ 1.09
PMM2-211ENST00000566540 SLC52A1Q9NWF4 448 aa21.89■■□□□ 1.09
PMM2-211ENST00000566540 TNRQ92752 1358 aa21.87■■□□□ 1.09
PMM2-211ENST00000566540 RGL3Q3MIN7 710 aa21.86■■□□□ 1.09
PMM2-211ENST00000566540 TMEM131LA2VDJ0 1609 aa21.84■■□□□ 1.09
PMM2-211ENST00000566540 PTPRMP28827 1452 aa21.81■■□□□ 1.08
PMM2-211ENST00000566540 PLPPR3Q6T4P5 718 aa21.81■■□□□ 1.08
PMM2-211ENST00000566540 CHGAP10645 457 aaKnown RBP21.8■■□□□ 1.08
PMM2-211ENST00000566540 DCAF11Q8TEB1 546 aa21.8■■□□□ 1.08
PMM2-211ENST00000566540 IFT172Q9UG01 1749 aa21.8■■□□□ 1.08
PMM2-211ENST00000566540 MYO5BQ9ULV0 1848 aa21.8■■□□□ 1.08
PMM2-211ENST00000566540 NBPF8Q3BBV2 869 aa21.78■■□□□ 1.08
PMM2-211ENST00000566540 UHRF1BP1Q6BDS2 1440 aa21.78■■□□□ 1.08
PMM2-211ENST00000566540 NLRP1Q9C000 1473 aa21.78■■□□□ 1.08
PMM2-211ENST00000566540 A2ML1A8K2U0 1454 aa21.77■■□□□ 1.08
PMM2-211ENST00000566540 KDM4FA0A1W2PPD8 638 aa21.77■■□□□ 1.08
PMM2-211ENST00000566540 KDM2AQ9Y2K7 1162 aa21.77■■□□□ 1.08
PMM2-211ENST00000566540 MYO3AQ8NEV4 1616 aa21.76■■□□□ 1.07
PMM2-211ENST00000566540 PPLO60437 1756 aa21.75■■□□□ 1.07
PMM2-211ENST00000566540 KDM5AP29375 1690 aaKnown RBP21.75■■□□□ 1.07
PMM2-211ENST00000566540 NEXMIFQ5QGS0 1516 aa21.75■■□□□ 1.07
PMM2-211ENST00000566540 UBR1Q8IWV7 1749 aa21.74■■□□□ 1.07
PMM2-211ENST00000566540 ZNF326Q5BKZ1 582 aaKnown RBP21.74■■□□□ 1.07
PMM2-211ENST00000566540 MYOM2P54296 1465 aa21.73■■□□□ 1.07
PMM2-211ENST00000566540 RPGRIP1LQ68CZ1 1315 aa21.73■■□□□ 1.07
PMM2-211ENST00000566540 PRAG1Q86YV5 1406 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms