RNA–Protein interactions for RNA: ENST00000566225.1

LINC01254-201, Transcript of long intergenic non-protein coding RNA 1254, humanhuman

BASIC

Gene LINC01254, Length 2,908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01254-201ENST00000566225 KIF14Q15058 1648 aa15.77■□□□□ 0.11
LINC01254-201ENST00000566225 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
LINC01254-201ENST00000566225 RGL3Q3MIN7 710 aa15.76■□□□□ 0.11
LINC01254-201ENST00000566225 ANKRD30AQ9BXX3 1397 aa15.76■□□□□ 0.11
LINC01254-201ENST00000566225 EIF5BO60841 1220 aaKnown RBP15.76■□□□□ 0.11
LINC01254-201ENST00000566225 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
LINC01254-201ENST00000566225 ANKRD50Q9ULJ7 1429 aa15.76■□□□□ 0.11
LINC01254-201ENST00000566225 CAMSAP2Q08AD1 1489 aa15.75■□□□□ 0.11
LINC01254-201ENST00000566225 UHRF1BP1Q6BDS2 1440 aa15.75■□□□□ 0.11
LINC01254-201ENST00000566225 PARD3Q8TEW0 1356 aa15.74■□□□□ 0.11
LINC01254-201ENST00000566225 NUP153P49790 1475 aaKnown RBP15.74■□□□□ 0.11
LINC01254-201ENST00000566225 RGS3P49796 1198 aa15.74■□□□□ 0.11
LINC01254-201ENST00000566225 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
LINC01254-201ENST00000566225 PER1O15534 1290 aaPredicted RBP15.73■□□□□ 0.11
LINC01254-201ENST00000566225 FRAT2O75474 233 aaPredicted RBP15.71■□□□□ 0.11
LINC01254-201ENST00000566225 PANK3Q9H999 370 aa15.71■□□□□ 0.11
LINC01254-201ENST00000566225 FAM161AQ3B820 660 aa15.7■□□□□ 0.1
LINC01254-201ENST00000566225 KIAA0586Q9BVV6 1533 aa15.69■□□□□ 0.1
LINC01254-201ENST00000566225 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
LINC01254-201ENST00000566225 GPATCH8Q9UKJ3 1502 aaKnown RBP15.69■□□□□ 0.1
LINC01254-201ENST00000566225 KDM2BQ8NHM5 1336 aa15.69■□□□□ 0.1
LINC01254-201ENST00000566225 CENPQQ7L2Z9 268 aaPredicted RBP15.68■□□□□ 0.1
LINC01254-201ENST00000566225 TROQ12816 1431 aaPredicted RBP15.68■□□□□ 0.1
LINC01254-201ENST00000566225 C8orf34Q49A92 452 aa15.68■□□□□ 0.1
LINC01254-201ENST00000566225 TSPY4P0CV99 314 aa15.67■□□□□ 0.1
LINC01254-201ENST00000566225 TSPY10P0CW01 314 aa15.67■□□□□ 0.1
LINC01254-201ENST00000566225 DISP1Q96F81 1524 aa15.64■□□□□ 0.09
LINC01254-201ENST00000566225 ADGRL2O95490 1459 aa15.64■□□□□ 0.09
LINC01254-201ENST00000566225 HNRNPMP52272 730 aaKnown RBP eCLIP15.64■□□□□ 0.09
LINC01254-201ENST00000566225 DISP3Q9P2K9 1392 aa15.64■□□□□ 0.09
LINC01254-201ENST00000566225 ARHGEF12Q9NZN5 1544 aa15.63■□□□□ 0.09
LINC01254-201ENST00000566225 WDR43Q15061 677 aaKnown RBP eCLIP15.63■□□□□ 0.09
LINC01254-201ENST00000566225 DUSP27Q5VZP5 1158 aa15.63■□□□□ 0.09
LINC01254-201ENST00000566225 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
LINC01254-201ENST00000566225 BLMP54132 1417 aaPredicted RBP15.62■□□□□ 0.09
LINC01254-201ENST00000566225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
LINC01254-201ENST00000566225 PLB1Q6P1J6 1458 aa15.62■□□□□ 0.09
LINC01254-201ENST00000566225 C9orf84Q5VXU9 1444 aa15.62■□□□□ 0.09
LINC01254-201ENST00000566225 PLEKHH1Q9ULM0 1364 aa15.61■□□□□ 0.09
LINC01254-201ENST00000566225 TESK2Q96S53 571 aa15.61■□□□□ 0.09
LINC01254-201ENST00000566225 ADAMTS12P58397 1594 aa15.61■□□□□ 0.09
LINC01254-201ENST00000566225 GOLGA2Q08379 1002 aa15.6■□□□□ 0.09
LINC01254-201ENST00000566225 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.6■□□□□ 0.09
LINC01254-201ENST00000566225 RAPGEF6Q8TEU7 1601 aa15.59■□□□□ 0.09
LINC01254-201ENST00000566225 PLEKHD1A6NEE1 506 aa15.59■□□□□ 0.09
LINC01254-201ENST00000566225 KIAA0556O60303 1618 aa15.59■□□□□ 0.09
LINC01254-201ENST00000566225 TMF1P82094 1093 aa15.59■□□□□ 0.09
LINC01254-201ENST00000566225 PRAG1Q86YV5 1406 aa15.58■□□□□ 0.09
LINC01254-201ENST00000566225 CCDC146Q8IYE0 955 aa15.58■□□□□ 0.09
LINC01254-201ENST00000566225 FBLN2P98095 1184 aa15.57■□□□□ 0.08
LINC01254-201ENST00000566225 CCDC144AA2RUR9 1427 aa15.57■□□□□ 0.08
LINC01254-201ENST00000566225 E9PCH4 1651 aa15.56■□□□□ 0.08
LINC01254-201ENST00000566225 ADGBQ8N7X0 1667 aa15.56■□□□□ 0.08
LINC01254-201ENST00000566225 KNSTRNQ9Y448 316 aa15.56■□□□□ 0.08
LINC01254-201ENST00000566225 PPP2R1AP30153 589 aa15.56■□□□□ 0.08
LINC01254-201ENST00000566225 ARXQ96QS3 562 aa15.56■□□□□ 0.08
LINC01254-201ENST00000566225 SLKQ9H2G2 1235 aaPredicted RBP15.56■□□□□ 0.08
LINC01254-201ENST00000566225 POGKQ9P215 609 aa15.56■□□□□ 0.08
LINC01254-201ENST00000566225 PBRM1Q86U86 1689 aa15.55■□□□□ 0.08
LINC01254-201ENST00000566225 ZMYM4Q5VZL5 1548 aa15.55■□□□□ 0.08
LINC01254-201ENST00000566225 BCAR3O75815 825 aa15.55■□□□□ 0.08
LINC01254-201ENST00000566225 ERBINQ96RT1 1412 aa15.55■□□□□ 0.08
LINC01254-201ENST00000566225 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
LINC01254-201ENST00000566225 COL17A1Q9UMD9 1497 aaPredicted RBP15.54■□□□□ 0.08
LINC01254-201ENST00000566225 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
LINC01254-201ENST00000566225 UBE2Q2Q8WVN8 375 aa15.53■□□□□ 0.08
LINC01254-201ENST00000566225 PLEKHH2Q8IVE3 1493 aa15.53■□□□□ 0.08
LINC01254-201ENST00000566225 SEC24BO95487 1268 aa15.53■□□□□ 0.08
LINC01254-201ENST00000566225 IGHDP01880 384 aa15.53■□□□□ 0.08
LINC01254-201ENST00000566225 CEP170Q5SW79 1584 aa15.52■□□□□ 0.08
LINC01254-201ENST00000566225 SLFN5Q08AF3 891 aa15.52■□□□□ 0.08
LINC01254-201ENST00000566225 FAM43AQ8N2R8 423 aa15.52■□□□□ 0.07
LINC01254-201ENST00000566225 INSRP06213 1382 aa15.52■□□□□ 0.07
LINC01254-201ENST00000566225 KDM5DQ9BY66 1539 aa15.51■□□□□ 0.07
LINC01254-201ENST00000566225 APAF1O14727 1248 aa15.51■□□□□ 0.07
LINC01254-201ENST00000566225 ITSN2Q9NZM3 1697 aa15.51■□□□□ 0.07
LINC01254-201ENST00000566225 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
LINC01254-201ENST00000566225 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
LINC01254-201ENST00000566225 USP19O94966 1318 aa15.49■□□□□ 0.07
LINC01254-201ENST00000566225 PTPRGP23470 1445 aa15.49■□□□□ 0.07
LINC01254-201ENST00000566225 GPRASP1Q5JY77 1395 aa15.48■□□□□ 0.07
LINC01254-201ENST00000566225 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
LINC01254-201ENST00000566225 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
LINC01254-201ENST00000566225 A2MP01023 1474 aa15.48■□□□□ 0.07
LINC01254-201ENST00000566225 CROCC2H7BZ55 1655 aa15.48■□□□□ 0.07
LINC01254-201ENST00000566225 AMER1Q5JTC6 1135 aaPredicted RBP15.47■□□□□ 0.07
LINC01254-201ENST00000566225 COG6Q9Y2V7 657 aa15.47■□□□□ 0.07
LINC01254-201ENST00000566225 FAM135AQ9P2D6 1515 aa15.47■□□□□ 0.07
LINC01254-201ENST00000566225 BECN1Q14457 450 aa15.46■□□□□ 0.07
LINC01254-201ENST00000566225 PANK1Q8TE04 598 aa15.46■□□□□ 0.07
LINC01254-201ENST00000566225 JPH4Q96JJ6 628 aa15.46■□□□□ 0.07
LINC01254-201ENST00000566225 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.07
LINC01254-201ENST00000566225 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.06
LINC01254-201ENST00000566225 GRIN2AQ12879 1464 aa15.45■□□□□ 0.06
LINC01254-201ENST00000566225 MAGI2Q86UL8 1455 aa15.45■□□□□ 0.06
LINC01254-201ENST00000566225 TRPM1Q7Z4N2 1603 aa15.45■□□□□ 0.06
LINC01254-201ENST00000566225 PLA2R1Q13018 1463 aa15.45■□□□□ 0.06
LINC01254-201ENST00000566225 SPRYD3Q8NCJ5 442 aa15.45■□□□□ 0.06
LINC01254-201ENST00000566225 RRAGDQ9NQL2 400 aaPredicted RBP15.44■□□□□ 0.06
LINC01254-201ENST00000566225 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms