RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 KIF21BO75037 1637 aa15.24■□□□□ 0.03
UBFD1-205ENST00000566136 PRG4Q92954 1404 aaPredicted RBP15.23■□□□□ 0.03
UBFD1-205ENST00000566136 A0A0U1RQG5 324 aaPredicted RBP15.23■□□□□ 0.03
UBFD1-205ENST00000566136 ARHGEF1Q92888 912 aaKnown RBP15.23■□□□□ 0.03
UBFD1-205ENST00000566136 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
UBFD1-205ENST00000566136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.03
UBFD1-205ENST00000566136 MCM6Q14566 821 aa15.22■□□□□ 0.03
UBFD1-205ENST00000566136 CCDC125Q86Z20 511 aa15.22■□□□□ 0.03
UBFD1-205ENST00000566136 RAPGEF2Q9Y4G8 1499 aa15.21■□□□□ 0.02
UBFD1-205ENST00000566136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.2■□□□□ 0.02
UBFD1-205ENST00000566136 PROSER2Q86WR7 435 aaPredicted RBP15.2■□□□□ 0.02
UBFD1-205ENST00000566136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
UBFD1-205ENST00000566136 CUL7Q14999 1698 aa15.17■□□□□ 0.02
UBFD1-205ENST00000566136 FNBP4Q8N3X1 1017 aaPredicted RBP15.17■□□□□ 0.02
UBFD1-205ENST00000566136 ARIH1Q9Y4X5 557 aaPredicted RBP15.17■□□□□ 0.02
UBFD1-205ENST00000566136 CLIP1P30622 1438 aa15.16■□□□□ 0.02
UBFD1-205ENST00000566136 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.16■□□□□ 0.02
UBFD1-205ENST00000566136 CARMIL1Q5VZK9 1371 aa15.15■□□□□ 0.02
UBFD1-205ENST00000566136 KIAA0586Q9BVV6 1533 aa15.14■□□□□ 0.01
UBFD1-205ENST00000566136 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
UBFD1-205ENST00000566136 CCER1Q8TC90 406 aaPredicted RBP15.12■□□□□ 0.01
UBFD1-205ENST00000566136 SERPINA10Q9UK55 444 aa15.12■□□□□ 0.01
UBFD1-205ENST00000566136 E2F4Q16254 413 aa15.11■□□□□ 0.01
UBFD1-205ENST00000566136 PRDM16Q9HAZ2 1276 aa15.11■□□□□ 0.01
UBFD1-205ENST00000566136 MLLT3P42568 568 aaPredicted RBP15.11■□□□□ 0.01
UBFD1-205ENST00000566136 PSMD1Q99460 953 aa15.09■□□□□ 0.01
UBFD1-205ENST00000566136 PLSCR2Q9NRY7 297 aa15.09■□□□□ 0.01
UBFD1-205ENST00000566136 IGSF5Q9NSI5 407 aa15.09■□□□□ 0.01
UBFD1-205ENST00000566136 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0.01
UBFD1-205ENST00000566136 CCDC27Q2M243 656 aa15.08■□□□□ 0
UBFD1-205ENST00000566136 GPIHBP1Q8IV16 184 aa15.08■□□□□ 0
UBFD1-205ENST00000566136 VPS8Q8N3P4 1428 aa15.06■□□□□ 0
UBFD1-205ENST00000566136 KIAA1522Q9P206 1035 aaPredicted RBP15.05■□□□□ 0
UBFD1-205ENST00000566136 PRXQ9BXM0 1461 aa15.05■□□□□ 0
UBFD1-205ENST00000566136 NEFLP07196 543 aa15.03■□□□□ -0
UBFD1-205ENST00000566136 TICAM2Q86XR7 235 aa15.03■□□□□ -0
UBFD1-205ENST00000566136 BCCIPQ9P287 314 aaKnown RBP eCLIP15.03■□□□□ -0
UBFD1-205ENST00000566136 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
UBFD1-205ENST00000566136 IQGAP2Q13576 1575 aa15.01□□□□□ -0.01
UBFD1-205ENST00000566136 KIF13AQ9H1H9 1805 aa15.01□□□□□ -0.01
UBFD1-205ENST00000566136 PTPRGP23470 1445 aa15.01□□□□□ -0.01
UBFD1-205ENST00000566136 IVNS1ABPQ9Y6Y0 642 aa15□□□□□ -0.01
UBFD1-205ENST00000566136 PARP9Q8IXQ6 854 aa14.99□□□□□ -0.01
UBFD1-205ENST00000566136 CARMIL2Q6F5E8 1435 aa14.99□□□□□ -0.01
UBFD1-205ENST00000566136 VGFO15240 615 aaPredicted RBP14.99□□□□□ -0.01
UBFD1-205ENST00000566136 FAM69CQ0P6D2 419 aa14.99□□□□□ -0.01
UBFD1-205ENST00000566136 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
UBFD1-205ENST00000566136 MAPKBP1O60336 1514 aa14.97□□□□□ -0.01
UBFD1-205ENST00000566136 ABCC10Q5T3U5 1492 aa14.96□□□□□ -0.01
UBFD1-205ENST00000566136 BRD1O95696 1058 aa14.96□□□□□ -0.01
UBFD1-205ENST00000566136 PPP1R1BQ9UD71 204 aaPredicted RBP14.96□□□□□ -0.01
UBFD1-205ENST00000566136 AMOTL2Q9Y2J4 779 aa14.95□□□□□ -0.02
UBFD1-205ENST00000566136 DISP1Q96F81 1524 aa14.95□□□□□ -0.02
UBFD1-205ENST00000566136 SIRT1Q96EB6 747 aa14.93□□□□□ -0.02
UBFD1-205ENST00000566136 ZNF662Q6ZS27 426 aa14.93□□□□□ -0.02
UBFD1-205ENST00000566136 DIP2BQ9P265 1576 aa14.93□□□□□ -0.02
UBFD1-205ENST00000566136 UGGT2Q9NYU1 1516 aa14.92□□□□□ -0.02
UBFD1-205ENST00000566136 PPP1R37O75864 691 aa14.91□□□□□ -0.02
UBFD1-205ENST00000566136 SKIV2LQ15477 1246 aaKnown RBP14.91□□□□□ -0.02
UBFD1-205ENST00000566136 DDRGK1Q96HY6 314 aa14.91□□□□□ -0.02
UBFD1-205ENST00000566136 ABCC2Q92887 1545 aa14.89□□□□□ -0.03
UBFD1-205ENST00000566136 MRRFQ96E11 262 aaKnown RBP14.89□□□□□ -0.03
UBFD1-205ENST00000566136 SPATA32Q96LK8 384 aa14.89□□□□□ -0.03
UBFD1-205ENST00000566136 PRDM10Q9NQV6 1147 aa14.89□□□□□ -0.03
UBFD1-205ENST00000566136 UACAQ9BZF9 1416 aa14.88□□□□□ -0.03
UBFD1-205ENST00000566136 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.88□□□□□ -0.03
UBFD1-205ENST00000566136 DCAF8Q5TAQ9 597 aa14.88□□□□□ -0.03
UBFD1-205ENST00000566136 KIAA0556O60303 1618 aa14.87□□□□□ -0.03
UBFD1-205ENST00000566136 UHRF1BP1LA0JNW5 1464 aa14.86□□□□□ -0.03
UBFD1-205ENST00000566136 CTTNBP2Q8WZ74 1663 aa14.86□□□□□ -0.03
UBFD1-205ENST00000566136 RFX1P22670 979 aa14.85□□□□□ -0.03
UBFD1-205ENST00000566136 KANK4Q5T7N3 995 aaPredicted RBP14.85□□□□□ -0.03
UBFD1-205ENST00000566136 CC2D2BQ6DHV5 1058 aa14.85□□□□□ -0.03
UBFD1-205ENST00000566136 RYDENQ9NUL5 291 aaKnown RBP14.85□□□□□ -0.03
UBFD1-205ENST00000566136 ASXL2Q76L83 1435 aa14.85□□□□□ -0.03
UBFD1-205ENST00000566136 TSPOAP1O95153 1857 aa14.85□□□□□ -0.03
UBFD1-205ENST00000566136 ARHGAP35Q9NRY4 1499 aa14.85□□□□□ -0.03
UBFD1-205ENST00000566136 COG6Q9Y2V7 657 aa14.84□□□□□ -0.03
UBFD1-205ENST00000566136 NOL8Q76FK4 1167 aaKnown RBP14.83□□□□□ -0.04
UBFD1-205ENST00000566136 CLSTN1O94985 981 aa14.83□□□□□ -0.04
UBFD1-205ENST00000566136 SND1Q7KZF4 910 aaKnown RBP eCLIP14.83□□□□□ -0.04
UBFD1-205ENST00000566136 ZNF330Q9Y3S2 320 aaPredicted RBP14.83□□□□□ -0.04
UBFD1-205ENST00000566136 FGD1P98174 961 aa14.82□□□□□ -0.04
UBFD1-205ENST00000566136 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
UBFD1-205ENST00000566136 NUBP1P53384 320 aa14.81□□□□□ -0.04
UBFD1-205ENST00000566136 SMYD5Q6GMV2 418 aa14.81□□□□□ -0.04
UBFD1-205ENST00000566136 CCDC102AQ96A19 550 aa14.81□□□□□ -0.04
UBFD1-205ENST00000566136 KDM5BQ9UGL1 1544 aa14.81□□□□□ -0.04
UBFD1-205ENST00000566136 FOSBP53539 338 aa14.81□□□□□ -0.04
UBFD1-205ENST00000566136 MARCH6O60337 910 aa14.8□□□□□ -0.04
UBFD1-205ENST00000566136 GIMAP6Q6P9H5 292 aa14.8□□□□□ -0.04
UBFD1-205ENST00000566136 POM121CA8CG34 1229 aa14.79□□□□□ -0.04
UBFD1-205ENST00000566136 MS4A1P11836 297 aa14.79□□□□□ -0.04
UBFD1-205ENST00000566136 ZCCHC11Q5TAX3 1644 aaKnown RBP14.79□□□□□ -0.04
UBFD1-205ENST00000566136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.78□□□□□ -0.046e-7■□□□□ 8.1
UBFD1-205ENST00000566136 NCKAP5LQ9HCH0 1330 aa14.78□□□□□ -0.04
UBFD1-205ENST00000566136 GSE1Q14687 1217 aa14.77□□□□□ -0.04
UBFD1-205ENST00000566136 KDM6BO15054 1643 aa14.77□□□□□ -0.04
UBFD1-205ENST00000566136 GPR37O15354 613 aa14.77□□□□□ -0.05
UBFD1-205ENST00000566136 ANKRD62A6NC57 917 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms