RNA–Protein interactions for RNA: ENST00000566106.1

SHISA9-204, Transcript of shisa family member 9, humanhuman

TSL 4

Gene SHISA9, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-204ENST00000566106 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
SHISA9-204ENST00000566106 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
SHISA9-204ENST00000566106 SHANK2Q9UPX8 1470 aa12.37□□□□□ -0.43
SHISA9-204ENST00000566106 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
SHISA9-204ENST00000566106 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
SHISA9-204ENST00000566106 ITSN2Q9NZM3 1697 aa12.36□□□□□ -0.43
SHISA9-204ENST00000566106 A2ML1A8K2U0 1454 aa12.36□□□□□ -0.43
SHISA9-204ENST00000566106 PREX2Q70Z35 1606 aa12.36□□□□□ -0.43
SHISA9-204ENST00000566106 SAMD9LQ8IVG5 1584 aa12.35□□□□□ -0.43
SHISA9-204ENST00000566106 CDC42BPBQ9Y5S2 1711 aa12.35□□□□□ -0.43
SHISA9-204ENST00000566106 HNRNPMP52272 730 aaKnown RBP eCLIP12.35□□□□□ -0.43
SHISA9-204ENST00000566106 A2MP01023 1474 aa12.34□□□□□ -0.43
SHISA9-204ENST00000566106 CLTCQ00610 1675 aaKnown RBP12.33□□□□□ -0.44
SHISA9-204ENST00000566106 RGS17Q9UGC6 210 aaPredicted RBP12.33□□□□□ -0.44
SHISA9-204ENST00000566106 SYCP2Q9BX26 1530 aa12.32□□□□□ -0.44
SHISA9-204ENST00000566106 SETD5Q9C0A6 1442 aa12.32□□□□□ -0.44
SHISA9-204ENST00000566106 ANKLE2Q86XL3 938 aa12.32□□□□□ -0.44
SHISA9-204ENST00000566106 DHX57Q6P158 1386 aaKnown RBP12.31□□□□□ -0.44
SHISA9-204ENST00000566106 PLXNC1O60486 1568 aa12.31□□□□□ -0.44
SHISA9-204ENST00000566106 DNMT1P26358 1616 aaKnown RBP12.31□□□□□ -0.44
SHISA9-204ENST00000566106 ATP7AQ04656 1500 aa12.31□□□□□ -0.44
SHISA9-204ENST00000566106 TNRQ92752 1358 aa12.3□□□□□ -0.44
SHISA9-204ENST00000566106 NEURL4Q96JN8 1562 aa12.3□□□□□ -0.44
SHISA9-204ENST00000566106 ALKQ9UM73 1620 aa12.3□□□□□ -0.44
SHISA9-204ENST00000566106 FBXO31Q5XUX0 539 aaPredicted RBP12.3□□□□□ -0.44
SHISA9-204ENST00000566106 VWDEQ8N2E2 1590 aa12.29□□□□□ -0.44
SHISA9-204ENST00000566106 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
SHISA9-204ENST00000566106 NPHP4O75161 1426 aaPredicted RBP12.28□□□□□ -0.44
SHISA9-204ENST00000566106 KIAA1107Q9UPP5 1409 aa12.28□□□□□ -0.44
SHISA9-204ENST00000566106 GPATCH8Q9UKJ3 1502 aaKnown RBP12.28□□□□□ -0.44
SHISA9-204ENST00000566106 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
SHISA9-204ENST00000566106 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
SHISA9-204ENST00000566106 GCC2Q8IWJ2 1684 aa12.28□□□□□ -0.44
SHISA9-204ENST00000566106 HFM1A2PYH4 1435 aa12.28□□□□□ -0.44
SHISA9-204ENST00000566106 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.45
SHISA9-204ENST00000566106 PLEKHH2Q8IVE3 1493 aa12.26□□□□□ -0.45
SHISA9-204ENST00000566106 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
SHISA9-204ENST00000566106 MED14O60244 1454 aa12.24□□□□□ -0.45
SHISA9-204ENST00000566106 POTEAQ6S8J7 498 aa12.24□□□□□ -0.45
SHISA9-204ENST00000566106 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
SHISA9-204ENST00000566106 CDC42BPAQ5VT25 1732 aa12.23□□□□□ -0.45
SHISA9-204ENST00000566106 PZPP20742 1482 aa12.23□□□□□ -0.45
SHISA9-204ENST00000566106 POLR1AO95602 1720 aaPredicted RBP12.23□□□□□ -0.45
SHISA9-204ENST00000566106 FAM135AQ9P2D6 1515 aa12.22□□□□□ -0.45
SHISA9-204ENST00000566106 NAIPQ13075 1403 aa12.22□□□□□ -0.45
SHISA9-204ENST00000566106 DHX29Q7Z478 1369 aaKnown RBP12.22□□□□□ -0.45
SHISA9-204ENST00000566106 KIF3BO15066 747 aa12.22□□□□□ -0.45
SHISA9-204ENST00000566106 ITGAEP38570 1179 aa12.22□□□□□ -0.45
SHISA9-204ENST00000566106 NLRP1Q9C000 1473 aa12.21□□□□□ -0.45
SHISA9-204ENST00000566106 ROCK1Q13464 1354 aa12.21□□□□□ -0.45
SHISA9-204ENST00000566106 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.45
SHISA9-204ENST00000566106 WASHC2CQ9Y4E1 1318 aa12.21□□□□□ -0.45
SHISA9-204ENST00000566106 CROCC2H7BZ55 1655 aa12.21□□□□□ -0.45
SHISA9-204ENST00000566106 UGGT1Q9NYU2 1555 aa12.21□□□□□ -0.46
SHISA9-204ENST00000566106 ZNF644Q9H582 1327 aaPredicted RBP12.2□□□□□ -0.46
SHISA9-204ENST00000566106 RNF17Q9BXT8 1623 aaKnown RBP12.2□□□□□ -0.46
SHISA9-204ENST00000566106 CAMSAP2Q08AD1 1489 aa12.2□□□□□ -0.46
SHISA9-204ENST00000566106 DAPK1P53355 1430 aa12.2□□□□□ -0.46
SHISA9-204ENST00000566106 ADGBQ8N7X0 1667 aa12.19□□□□□ -0.46
SHISA9-204ENST00000566106 KDM5DQ9BY66 1539 aa12.19□□□□□ -0.46
SHISA9-204ENST00000566106 RTEL1-TNFRSF6BF6WH68 1400 aa12.18□□□□□ -0.46
SHISA9-204ENST00000566106 DEPDC5O75140 1603 aa12.18□□□□□ -0.46
SHISA9-204ENST00000566106 ABCC5O15440 1437 aa12.17□□□□□ -0.46
SHISA9-204ENST00000566106 ARHGEF5Q12774 1597 aa12.17□□□□□ -0.46
SHISA9-204ENST00000566106 ADGRL2O95490 1459 aa12.16□□□□□ -0.46
SHISA9-204ENST00000566106 MBD5Q9P267 1494 aa12.16□□□□□ -0.46
SHISA9-204ENST00000566106 SYNMO15061 1565 aa12.16□□□□□ -0.46
SHISA9-204ENST00000566106 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
SHISA9-204ENST00000566106 FAM135BQ49AJ0 1406 aa12.15□□□□□ -0.46
SHISA9-204ENST00000566106 STRCP1A6NGW2 1772 aa12.13□□□□□ -0.47
SHISA9-204ENST00000566106 TIMELESSQ9UNS1 1208 aa12.11□□□□□ -0.47
SHISA9-204ENST00000566106 SCAF11Q99590 1463 aaKnown RBP12.1□□□□□ -0.47
SHISA9-204ENST00000566106 LTKP29376 864 aa12.1□□□□□ -0.47
SHISA9-204ENST00000566106 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
SHISA9-204ENST00000566106 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
SHISA9-204ENST00000566106 CCDC141Q6ZP82 1450 aa12.09□□□□□ -0.47
SHISA9-204ENST00000566106 TMEM94Q12767 1356 aa12.08□□□□□ -0.48
SHISA9-204ENST00000566106 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
SHISA9-204ENST00000566106 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.48
SHISA9-204ENST00000566106 ERVK-7P63135 1459 aa12.08□□□□□ -0.48
SHISA9-204ENST00000566106 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
SHISA9-204ENST00000566106 EID1Q9Y6B2 187 aa12.06□□□□□ -0.48
SHISA9-204ENST00000566106 ZC3H13Q5T200 1668 aaKnown RBP12.06□□□□□ -0.48
SHISA9-204ENST00000566106 ABCC3O15438 1527 aa12.06□□□□□ -0.48
SHISA9-204ENST00000566106 TSPY4P0CV99 314 aa12.05□□□□□ -0.48
SHISA9-204ENST00000566106 TSPY10P0CW01 314 aa12.05□□□□□ -0.48
SHISA9-204ENST00000566106 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
SHISA9-204ENST00000566106 RBM33Q96EV2 1170 aaKnown RBP12.05□□□□□ -0.48
SHISA9-204ENST00000566106 ANKRD30AQ9BXX3 1397 aa12.05□□□□□ -0.48
SHISA9-204ENST00000566106 JCADQ9P266 1359 aa12.05□□□□□ -0.48
SHISA9-204ENST00000566106 ARHGAP23Q9P227 1491 aa12.04□□□□□ -0.48
SHISA9-204ENST00000566106 KCNA6P17658 529 aa12.04□□□□□ -0.48
SHISA9-204ENST00000566106 RRP7BPQ9NSQ0 103 aa12.04□□□□□ -0.48
SHISA9-204ENST00000566106 SLIT1O75093 1534 aa12.03□□□□□ -0.48
SHISA9-204ENST00000566106 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
SHISA9-204ENST00000566106 PROSER2Q86WR7 435 aaPredicted RBP12.03□□□□□ -0.48
SHISA9-204ENST00000566106 CHIC2Q9UKJ5 165 aa12.03□□□□□ -0.48
SHISA9-204ENST00000566106 ZNF772Q68DY9 489 aaPredicted RBP12.02□□□□□ -0.49
SHISA9-204ENST00000566106 ROBO1Q9Y6N7 1651 aa12.01□□□□□ -0.49
SHISA9-204ENST00000566106 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms