RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 UNC13BO14795 1591 aa14.36□□□□□ -0.11
SF3B3-207ENST00000566095 TIMELESSQ9UNS1 1208 aa14.36□□□□□ -0.11
SF3B3-207ENST00000566095 NUP155O75694 1391 aa14.35□□□□□ -0.11
SF3B3-207ENST00000566095 BCORL1Q5H9F3 1711 aa14.35□□□□□ -0.11
SF3B3-207ENST00000566095 KIF3BO15066 747 aa14.34□□□□□ -0.11
SF3B3-207ENST00000566095 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
SF3B3-207ENST00000566095 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
SF3B3-207ENST00000566095 FAM135AQ9P2D6 1515 aa14.34□□□□□ -0.11
SF3B3-207ENST00000566095 AGLP35573 1532 aa14.33□□□□□ -0.12
SF3B3-207ENST00000566095 MPHOSPH9Q99550 1183 aa14.32□□□□□ -0.12
SF3B3-207ENST00000566095 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
SF3B3-207ENST00000566095 RNF17Q9BXT8 1623 aaKnown RBP14.32□□□□□ -0.12
SF3B3-207ENST00000566095 YEATS2Q9ULM3 1422 aa14.32□□□□□ -0.12
SF3B3-207ENST00000566095 COL17A1Q9UMD9 1497 aaPredicted RBP14.31□□□□□ -0.12
SF3B3-207ENST00000566095 PRDM15P57071 1507 aaPredicted RBP14.31□□□□□ -0.12
SF3B3-207ENST00000566095 IQGAP3Q86VI3 1631 aa14.3□□□□□ -0.12
SF3B3-207ENST00000566095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.12
SF3B3-207ENST00000566095 ZC3H13Q5T200 1668 aaKnown RBP14.27□□□□□ -0.12
SF3B3-207ENST00000566095 PZPP20742 1482 aa14.27□□□□□ -0.12
SF3B3-207ENST00000566095 ESF1Q9H501 851 aaKnown RBP14.27□□□□□ -0.13
SF3B3-207ENST00000566095 GGT6Q6P531 493 aa14.26□□□□□ -0.13
SF3B3-207ENST00000566095 LMTK2Q8IWU2 1503 aa14.25□□□□□ -0.13
SF3B3-207ENST00000566095 ARID4BQ4LE39 1312 aaPredicted RBP14.25□□□□□ -0.13
SF3B3-207ENST00000566095 WASHC2CQ9Y4E1 1318 aa14.25□□□□□ -0.13
SF3B3-207ENST00000566095 PKD2Q13563 968 aa14.25□□□□□ -0.13
SF3B3-207ENST00000566095 TET3O43151 1660 aa14.25□□□□□ -0.13
SF3B3-207ENST00000566095 VWDEQ8N2E2 1590 aa14.24□□□□□ -0.13
SF3B3-207ENST00000566095 RPRD2Q5VT52 1461 aaKnown RBP14.24□□□□□ -0.13
SF3B3-207ENST00000566095 CNTLNQ9NXG0 1405 aa14.22□□□□□ -0.13
SF3B3-207ENST00000566095 MROH1Q8NDA8 1641 aa14.21□□□□□ -0.13
SF3B3-207ENST00000566095 EFCAB6Q5THR3 1501 aa14.2□□□□□ -0.14
SF3B3-207ENST00000566095 ARHGAP31Q2M1Z3 1444 aa14.19□□□□□ -0.14
SF3B3-207ENST00000566095 AEBP2Q6ZN18 517 aaPredicted RBP14.19□□□□□ -0.14
SF3B3-207ENST00000566095 ABCC3O15438 1527 aa14.19□□□□□ -0.14
SF3B3-207ENST00000566095 CCDC144AA2RUR9 1427 aa14.18□□□□□ -0.14
SF3B3-207ENST00000566095 TONSLQ96HA7 1378 aa14.18□□□□□ -0.14
SF3B3-207ENST00000566095 ANKRD30BQ9BXX2 1392 aa14.18□□□□□ -0.14
SF3B3-207ENST00000566095 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
SF3B3-207ENST00000566095 CEP152O94986 1710 aa14.15□□□□□ -0.14
SF3B3-207ENST00000566095 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
SF3B3-207ENST00000566095 MLECQ14165 292 aa14.14□□□□□ -0.15
SF3B3-207ENST00000566095 TRPM2O94759 1503 aa14.14□□□□□ -0.15
SF3B3-207ENST00000566095 E9PCH4 1651 aa14.14□□□□□ -0.15
SF3B3-207ENST00000566095 PTPRTO14522 1441 aa14.13□□□□□ -0.15
SF3B3-207ENST00000566095 SPHKAPQ2M3C7 1700 aa14.12□□□□□ -0.15
SF3B3-207ENST00000566095 MROH2AA6NES4 1674 aa14.12□□□□□ -0.15
SF3B3-207ENST00000566095 NPATQ14207 1427 aa14.11□□□□□ -0.15
SF3B3-207ENST00000566095 FOXD1Q16676 465 aa14.11□□□□□ -0.15
SF3B3-207ENST00000566095 STAC3Q96MF2 364 aa14.1□□□□□ -0.15
SF3B3-207ENST00000566095 CLTCQ00610 1675 aaKnown RBP14.1□□□□□ -0.15
SF3B3-207ENST00000566095 SLC52A1Q9NWF4 448 aa14.09□□□□□ -0.15
SF3B3-207ENST00000566095 SIN3AQ96ST3 1273 aa14.08□□□□□ -0.16
SF3B3-207ENST00000566095 NEURL4Q96JN8 1562 aa14.08□□□□□ -0.16
SF3B3-207ENST00000566095 NOS1P29475 1434 aa14.07□□□□□ -0.16
SF3B3-207ENST00000566095 FER1L4A9Z1Z3 1794 aa14.07□□□□□ -0.16
SF3B3-207ENST00000566095 ZMYM3Q14202 1370 aa14.07□□□□□ -0.16
SF3B3-207ENST00000566095 SIGLEC1Q9BZZ2 1709 aa14.07□□□□□ -0.16
SF3B3-207ENST00000566095 ERVK-7P63135 1459 aa14.06□□□□□ -0.16
SF3B3-207ENST00000566095 PLA2R1Q13018 1463 aa14.05□□□□□ -0.16
SF3B3-207ENST00000566095 PREX1Q8TCU6 1659 aa14.04□□□□□ -0.16
SF3B3-207ENST00000566095 SPATA31D1Q6ZQQ2 1576 aa14.04□□□□□ -0.16
SF3B3-207ENST00000566095 KIF1BO60333 1816 aa14.03□□□□□ -0.16
SF3B3-207ENST00000566095 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
SF3B3-207ENST00000566095 CLTCL1P53675 1640 aa14.01□□□□□ -0.17
SF3B3-207ENST00000566095 TNRQ92752 1358 aa14.01□□□□□ -0.17
SF3B3-207ENST00000566095 RPGRIP1LQ68CZ1 1315 aa14.01□□□□□ -0.17
SF3B3-207ENST00000566095 NLRP1Q9C000 1473 aa14□□□□□ -0.17
SF3B3-207ENST00000566095 PPP1R15AO75807 674 aaPredicted RBP14□□□□□ -0.17
SF3B3-207ENST00000566095 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
SF3B3-207ENST00000566095 ADAMTSL3P82987 1691 aa14□□□□□ -0.17
SF3B3-207ENST00000566095 CHGAP10645 457 aaKnown RBP13.99□□□□□ -0.17
SF3B3-207ENST00000566095 L3MBTL2Q969R5 705 aa13.99□□□□□ -0.17
SF3B3-207ENST00000566095 PIK3C2BO00750 1634 aa13.99□□□□□ -0.17
SF3B3-207ENST00000566095 MADDQ8WXG6 1647 aa13.98□□□□□ -0.17
SF3B3-207ENST00000566095 SYNMO15061 1565 aa13.98□□□□□ -0.17
SF3B3-207ENST00000566095 ZNF326Q5BKZ1 582 aaKnown RBP13.98□□□□□ -0.17
SF3B3-207ENST00000566095 SPATA31E1Q6ZUB1 1445 aa13.98□□□□□ -0.17
SF3B3-207ENST00000566095 ADGRB3O60242 1522 aa13.97□□□□□ -0.17
SF3B3-207ENST00000566095 ILDR1Q86SU0 546 aaPredicted RBP13.97□□□□□ -0.17
SF3B3-207ENST00000566095 CFAP65Q6ZU64 1925 aaKnown RBP13.97□□□□□ -0.17
SF3B3-207ENST00000566095 RIMS1Q86UR5 1692 aaKnown RBP13.97□□□□□ -0.17
SF3B3-207ENST00000566095 C3P01024 1663 aa13.96□□□□□ -0.17
SF3B3-207ENST00000566095 KDM5AP29375 1690 aaKnown RBP13.96□□□□□ -0.17
SF3B3-207ENST00000566095 RGL3Q3MIN7 710 aa13.96□□□□□ -0.17
SF3B3-207ENST00000566095 DCAF11Q8TEB1 546 aa13.96□□□□□ -0.17
SF3B3-207ENST00000566095 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
SF3B3-207ENST00000566095 FBXO31Q5XUX0 539 aaPredicted RBP13.95□□□□□ -0.18
SF3B3-207ENST00000566095 VGFO15240 615 aaPredicted RBP13.94□□□□□ -0.18
SF3B3-207ENST00000566095 IDI1Q13907 227 aa13.94□□□□□ -0.18
SF3B3-207ENST00000566095 UHRF1BP1Q6BDS2 1440 aa13.94□□□□□ -0.18
SF3B3-207ENST00000566095 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
SF3B3-207ENST00000566095 MYOM2P54296 1465 aa13.93□□□□□ -0.18
SF3B3-207ENST00000566095 UGGT1Q9NYU2 1555 aa13.92□□□□□ -0.18
SF3B3-207ENST00000566095 KDM2AQ9Y2K7 1162 aa13.91□□□□□ -0.18
SF3B3-207ENST00000566095 SETD1BQ9UPS6 1966 aaKnown RBP13.91□□□□□ -0.18
SF3B3-207ENST00000566095 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
SF3B3-207ENST00000566095 PTPRMP28827 1452 aa13.9□□□□□ -0.18
SF3B3-207ENST00000566095 ZFYVE9O95405 1425 aa13.9□□□□□ -0.19
SF3B3-207ENST00000566095 A2ML1A8K2U0 1454 aa13.89□□□□□ -0.19
SF3B3-207ENST00000566095 THEMISQ8N1K5 641 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms