RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 DNMT1P26358 1616 aaKnown RBP16.64■□□□□ 0.25
NSMCE1-211ENST00000566087 RSPH4AQ5TD94 716 aa16.63■□□□□ 0.25
NSMCE1-211ENST00000566087 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
NSMCE1-211ENST00000566087 TIAM1Q13009 1591 aa16.63■□□□□ 0.25
NSMCE1-211ENST00000566087 A2ML1A8K2U0 1454 aa16.61■□□□□ 0.25
NSMCE1-211ENST00000566087 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
NSMCE1-211ENST00000566087 FBXO31Q5XUX0 539 aaPredicted RBP16.61■□□□□ 0.25
NSMCE1-211ENST00000566087 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
NSMCE1-211ENST00000566087 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
NSMCE1-211ENST00000566087 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
NSMCE1-211ENST00000566087 HSPA1LP34931 641 aa16.59■□□□□ 0.25
NSMCE1-211ENST00000566087 NEURL4Q96JN8 1562 aa16.59■□□□□ 0.25
NSMCE1-211ENST00000566087 NCOA2Q15596 1464 aa16.57■□□□□ 0.24
NSMCE1-211ENST00000566087 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
NSMCE1-211ENST00000566087 TNRQ92752 1358 aa16.57■□□□□ 0.24
NSMCE1-211ENST00000566087 KIF3BO15066 747 aa16.57■□□□□ 0.24
NSMCE1-211ENST00000566087 RTEL1-TNFRSF6BF6WH68 1400 aa16.55■□□□□ 0.24
NSMCE1-211ENST00000566087 MED1Q15648 1581 aaPredicted RBP16.55■□□□□ 0.24
NSMCE1-211ENST00000566087 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
NSMCE1-211ENST00000566087 KANK4Q5T7N3 995 aaPredicted RBP16.54■□□□□ 0.24
NSMCE1-211ENST00000566087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.53■□□□□ 0.24
NSMCE1-211ENST00000566087 TSPY4P0CV99 314 aa16.53■□□□□ 0.24
NSMCE1-211ENST00000566087 TSPY10P0CW01 314 aa16.53■□□□□ 0.24
NSMCE1-211ENST00000566087 CPS1P31327 1500 aa16.53■□□□□ 0.24
NSMCE1-211ENST00000566087 KDM5DQ9BY66 1539 aa16.53■□□□□ 0.24
NSMCE1-211ENST00000566087 PZPP20742 1482 aa16.53■□□□□ 0.24
NSMCE1-211ENST00000566087 TOM1O60784 492 aa16.52■□□□□ 0.24
NSMCE1-211ENST00000566087 WASHC2CQ9Y4E1 1318 aa16.51■□□□□ 0.23
NSMCE1-211ENST00000566087 CCDC141Q6ZP82 1450 aa16.51■□□□□ 0.23
NSMCE1-211ENST00000566087 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
NSMCE1-211ENST00000566087 CAMSAP2Q08AD1 1489 aa16.5■□□□□ 0.23
NSMCE1-211ENST00000566087 ANKLE2Q86XL3 938 aa16.5■□□□□ 0.23
NSMCE1-211ENST00000566087 MIA2Q96PC5 1412 aa16.49■□□□□ 0.23
NSMCE1-211ENST00000566087 ALKQ9UM73 1620 aa16.48■□□□□ 0.23
NSMCE1-211ENST00000566087 UGGT1Q9NYU2 1555 aa16.47■□□□□ 0.23
NSMCE1-211ENST00000566087 NPHP4O75161 1426 aaPredicted RBP16.47■□□□□ 0.23
NSMCE1-211ENST00000566087 MYOM3Q5VTT5 1437 aa16.47■□□□□ 0.23
NSMCE1-211ENST00000566087 THEMISQ8N1K5 641 aaPredicted RBP16.47■□□□□ 0.23
NSMCE1-211ENST00000566087 STRCP1A6NGW2 1772 aa16.46■□□□□ 0.22
NSMCE1-211ENST00000566087 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
NSMCE1-211ENST00000566087 NLRP1Q9C000 1473 aa16.45■□□□□ 0.22
NSMCE1-211ENST00000566087 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
NSMCE1-211ENST00000566087 DEPDC5O75140 1603 aa16.44■□□□□ 0.22
NSMCE1-211ENST00000566087 MED14O60244 1454 aa16.43■□□□□ 0.22
NSMCE1-211ENST00000566087 ARHGEF5Q12774 1597 aa16.42■□□□□ 0.22
NSMCE1-211ENST00000566087 ABCC3O15438 1527 aa16.4■□□□□ 0.22
NSMCE1-211ENST00000566087 RNF17Q9BXT8 1623 aaKnown RBP16.4■□□□□ 0.22
NSMCE1-211ENST00000566087 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
NSMCE1-211ENST00000566087 CFAP65Q6ZU64 1925 aaKnown RBP16.39■□□□□ 0.21
NSMCE1-211ENST00000566087 CEP152O94986 1710 aa16.38■□□□□ 0.21
NSMCE1-211ENST00000566087 ZC3H13Q5T200 1668 aaKnown RBP16.37■□□□□ 0.21
NSMCE1-211ENST00000566087 ERVK-7P63135 1459 aa16.37■□□□□ 0.21
NSMCE1-211ENST00000566087 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
NSMCE1-211ENST00000566087 SYNMO15061 1565 aa16.35■□□□□ 0.21
NSMCE1-211ENST00000566087 MROH1Q8NDA8 1641 aa16.35■□□□□ 0.21
NSMCE1-211ENST00000566087 FGD6Q6ZV73 1430 aa16.35■□□□□ 0.21
NSMCE1-211ENST00000566087 MAST1Q9Y2H9 1570 aa16.34■□□□□ 0.21
NSMCE1-211ENST00000566087 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.2
NSMCE1-211ENST00000566087 EIF2AK4Q9P2K8 1649 aaKnown RBP16.33■□□□□ 0.2
NSMCE1-211ENST00000566087 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
NSMCE1-211ENST00000566087 SCAF11Q99590 1463 aaKnown RBP16.31■□□□□ 0.2
NSMCE1-211ENST00000566087 LTKP29376 864 aa16.31■□□□□ 0.2
NSMCE1-211ENST00000566087 XIRP1Q702N8 1843 aaKnown RBP16.31■□□□□ 0.2
NSMCE1-211ENST00000566087 TXNDC2Q86VQ3 553 aa16.3■□□□□ 0.2
NSMCE1-211ENST00000566087 RGS17Q9UGC6 210 aaPredicted RBP16.28■□□□□ 0.2
NSMCE1-211ENST00000566087 ANKRD30AQ9BXX3 1397 aa16.27■□□□□ 0.2
NSMCE1-211ENST00000566087 ARHGAP23Q9P227 1491 aa16.27■□□□□ 0.19
NSMCE1-211ENST00000566087 SLIT1O75093 1534 aa16.26■□□□□ 0.19
NSMCE1-211ENST00000566087 DUOX2Q9NRD8 1548 aa16.26■□□□□ 0.19
NSMCE1-211ENST00000566087 ABCC5O15440 1437 aa16.26■□□□□ 0.19
NSMCE1-211ENST00000566087 DAPK1P53355 1430 aa16.26■□□□□ 0.19
NSMCE1-211ENST00000566087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
NSMCE1-211ENST00000566087 RRP7BPQ9NSQ0 103 aa16.25■□□□□ 0.19
NSMCE1-211ENST00000566087 PIK3C2BO00750 1634 aa16.25■□□□□ 0.19
NSMCE1-211ENST00000566087 CHIC2Q9UKJ5 165 aa16.24■□□□□ 0.19
NSMCE1-211ENST00000566087 PPARGC1BQ86YN6 1023 aaKnown RBP16.23■□□□□ 0.19
NSMCE1-211ENST00000566087 PRDM15P57071 1507 aaPredicted RBP16.23■□□□□ 0.19
NSMCE1-211ENST00000566087 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
NSMCE1-211ENST00000566087 RBM33Q96EV2 1170 aaKnown RBP16.22■□□□□ 0.19
NSMCE1-211ENST00000566087 EID1Q9Y6B2 187 aa16.22■□□□□ 0.19
NSMCE1-211ENST00000566087 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.18
NSMCE1-211ENST00000566087 ARHGAP31Q2M1Z3 1444 aa16.2■□□□□ 0.18
NSMCE1-211ENST00000566087 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
NSMCE1-211ENST00000566087 TMEM2Q9UHN6 1383 aa16.2■□□□□ 0.18
NSMCE1-211ENST00000566087 TMEM94Q12767 1356 aa16.19■□□□□ 0.18
NSMCE1-211ENST00000566087 KANK1Q14678 1352 aa16.19■□□□□ 0.18
NSMCE1-211ENST00000566087 ERBINQ96RT1 1412 aa16.19■□□□□ 0.18
NSMCE1-211ENST00000566087 POTEAQ6S8J7 498 aa16.18■□□□□ 0.18
NSMCE1-211ENST00000566087 SLC26A8Q96RN1 970 aa16.18■□□□□ 0.18
NSMCE1-211ENST00000566087 ROBO1Q9Y6N7 1651 aa16.18■□□□□ 0.18
NSMCE1-211ENST00000566087 IDI1Q13907 227 aa16.17■□□□□ 0.18
NSMCE1-211ENST00000566087 EFCAB6Q5THR3 1501 aa16.17■□□□□ 0.18
NSMCE1-211ENST00000566087 FAM135BQ49AJ0 1406 aa16.17■□□□□ 0.18
NSMCE1-211ENST00000566087 PROSER2Q86WR7 435 aaPredicted RBP16.15■□□□□ 0.18
NSMCE1-211ENST00000566087 KCNA6P17658 529 aa16.14■□□□□ 0.17
NSMCE1-211ENST00000566087 ITGAEP38570 1179 aa16.14■□□□□ 0.17
NSMCE1-211ENST00000566087 ADGRL2O95490 1459 aa16.14■□□□□ 0.17
NSMCE1-211ENST00000566087 TET3O43151 1660 aa16.14■□□□□ 0.17
NSMCE1-211ENST00000566087 KDM5AP29375 1690 aaKnown RBP16.13■□□□□ 0.17
NSMCE1-211ENST00000566087 ROCK1Q13464 1354 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms